ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal8h14 |
|---|---|
| Clone Library Name | barley_pub |
>PSD2_MOUSE (Q8VDM4) 26S proteasome non-ATPase regulatory subunit 2 (26S| proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) Length = 908 Score = 78.6 bits (192), Expect = 7e-15 Identities = 36/46 (78%), Positives = 42/46 (91%) Frame = -1 Query: 458 TITGFQTHTTPVLLAAGERAELATDKYIPLTSTLEGFVILKKNPEY 321 TITGFQTHTTPVLLA GERAELAT++++P+T LEGFVIL+KNP Y Sbjct: 861 TITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNY 906
>PSD2_HUMAN (Q13200) 26S proteasome non-ATPase regulatory subunit 2 (26S| proteasome regulatory subunit RPN1) (26S proteasome regulatory subunit S2) (26S proteasome subunit p97) (Tumor necrosis factor type 1 receptor-associated protein 2) (55.11 protein) Length = 908 Score = 78.6 bits (192), Expect = 7e-15 Identities = 36/46 (78%), Positives = 42/46 (91%) Frame = -1 Query: 458 TITGFQTHTTPVLLAAGERAELATDKYIPLTSTLEGFVILKKNPEY 321 TITGFQTHTTPVLLA GERAELAT++++P+T LEGFVIL+KNP Y Sbjct: 861 TITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNY 906
>RPN1_NEUCR (Q7S8R8) 26S proteasome regulatory subunit rpn-1| Length = 883 Score = 68.6 bits (166), Expect = 7e-12 Identities = 33/49 (67%), Positives = 40/49 (81%) Frame = -1 Query: 458 TITGFQTHTTPVLLAAGERAELATDKYIPLTSTLEGFVILKKNPEYHEE 312 TITG+QT +TPVLL GERAEL D+YI L+STLEG VIL+KNP++ E Sbjct: 834 TITGWQTQSTPVLLGYGERAELEDDQYISLSSTLEGLVILRKNPDWEGE 882
>RPN1_YEAST (P38764) 26S proteasome regulatory subunit RPN1 (Proteasome| non-ATPase subunit 1) Length = 992 Score = 66.6 bits (161), Expect = 3e-11 Identities = 33/48 (68%), Positives = 38/48 (79%) Frame = -1 Query: 455 ITGFQTHTTPVLLAAGERAELATDKYIPLTSTLEGFVILKKNPEYHEE 312 ITG+ T +TPVLL GERAEL TD+YI TS +EG VILKKNP+Y EE Sbjct: 944 ITGWITQSTPVLLNHGERAELETDEYISYTSHIEGVVILKKNPDYREE 991
>RPN1_CANGA (Q6FPV6) 26S proteasome regulatory subunit RPN1| Length = 983 Score = 64.7 bits (156), Expect = 1e-10 Identities = 31/49 (63%), Positives = 37/49 (75%) Frame = -1 Query: 458 TITGFQTHTTPVLLAAGERAELATDKYIPLTSTLEGFVILKKNPEYHEE 312 TITG+ T +TPVLL GERAEL D+YI T+ +EG VILKKNP + EE Sbjct: 934 TITGWITQSTPVLLGHGERAELENDEYISYTNNIEGVVILKKNPNFQEE 982
>RPN1_SCHPO (P87048) 26S proteasome regulatory subunit rpn1 (Proteasome| non-ATPase subunit mts4) (19S regulatory cap region of 26S protease subunit 2) Length = 891 Score = 60.8 bits (146), Expect = 2e-09 Identities = 33/44 (75%), Positives = 35/44 (79%) Frame = -1 Query: 455 ITGFQTHTTPVLLAAGERAELATDKYIPLTSTLEGFVILKKNPE 324 ITG+ THTTPVLL ERAELAT+ Y PLTS LEG VILKKN E Sbjct: 843 ITGWVTHTTPVLLHHNERAELATEAYTPLTS-LEGIVILKKNTE 885
>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 634 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 145 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 20 CN +S LV D TH+G +GV SF +L+C+ + Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 29.3 bits (64), Expect = 5.0 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 332 SSSELQSPPTWRSGECTCQSPILLAPP 412 + + SP TW C+CQ P + PP Sbjct: 1391 AQKKCDSPKTWDENSCSCQCPKNMRPP 1417
>KR195_HUMAN (Q3LI72) Keratin-associated protein 19-5| Length = 72 Score = 29.3 bits (64), Expect = 5.0 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 229 DDNLYLRACHAGELQKLASDQSLGGFPHSSWYSGFFFRITKPS 357 DD Y C G ++L GG+ + S + G+ +R +PS Sbjct: 19 DDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGFGGYGYRSCRPS 61
>DNAK_ANAVT (O05714) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 688 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 206 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 328 E+++ S E M G++K+L + K G+ PRGIP Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465
>DNAK1_ANASP (Q9ZEJ6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 688 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 206 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 328 E+++ S E M G++K+L + K G+ PRGIP Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465
>CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase)| Length = 750 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 301 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 191 P + +MQ FGV ++ +G RH F + HLG+ Sbjct: 228 PRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGV 264
>CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific catalase)| Length = 744 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 301 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 191 P + +MQ FGV ++ +G RH F + HLG+ Sbjct: 228 PRSYRMMQGFGVNTFSLVNKEGKRHFVKFHWIPHLGV 264 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,070,518 Number of Sequences: 219361 Number of extensions: 1704256 Number of successful extensions: 4826 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4666 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4825 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
