| Clone Name | rbaal37g03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RECA_WOLPM (P62222) Protein recA (Recombinase A) | 29 | 4.0 | 2 | RECA_WOLTR (Q5GSK9) Protein recA (Recombinase A) | 28 | 5.2 | 3 | PDR5_ARATH (Q9ZUT8) Probable pleiotropic drug resistance protein 5 | 28 | 5.2 | 4 | GBLP_SCHPO (Q10281) Guanine nucleotide-binding protein beta subu... | 28 | 5.2 |
|---|
>RECA_WOLPM (P62222) Protein recA (Recombinase A)| Length = 355 Score = 28.9 bits (63), Expect = 4.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 57 QKLKLTTTQYELHQPNTGRQPLHIASY 137 +KL ++T + QP+TG Q LHI Y Sbjct: 111 RKLGVSTDDLVISQPDTGEQALHIVEY 137
>RECA_WOLTR (Q5GSK9) Protein recA (Recombinase A)| Length = 355 Score = 28.5 bits (62), Expect = 5.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 57 QKLKLTTTQYELHQPNTGRQPLHIASY 137 +KL + T + QP+TG Q LHI Y Sbjct: 111 RKLGVNTDNLVISQPDTGEQALHIVEY 137
>PDR5_ARATH (Q9ZUT8) Probable pleiotropic drug resistance protein 5| Length = 1413 Score = 28.5 bits (62), Expect = 5.2 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -3 Query: 153 LFVVACNLLCVTAAAQYLVGVTRTELLLALVSECQNVFTT 34 L+ + CNLLC A +L+ +T ++ A++ Q++F T Sbjct: 1276 LYAMFCNLLCFNYLAMFLISITPNFMVAAIL---QSLFFT 1312
>GBLP_SCHPO (Q10281) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) Length = 314 Score = 28.5 bits (62), Expect = 5.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 59 ETKANNNSVRVTPTKYWAAAVTHSKLQ 139 E KAN N++ +P +YW A T S ++ Sbjct: 231 EAKANINALVFSPNRYWLCAATGSSIR 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,279,089 Number of Sequences: 219361 Number of extensions: 187238 Number of successful extensions: 495 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 495 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 495 length of database: 80,573,946 effective HSP length: 30 effective length of database: 73,993,116 effective search space used: 1775834784 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)