ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 48 0.008
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.008
3dbj|AK067322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.008
4dbj|AK066509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.008
5gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosom... 40 2.0
6gb|AC123823.3| Mus musculus BAC clone RP24-63C11 from chromosome... 40 2.0
7ref|XM_667525.1| Plasmodium berghei strain ANKA hypothetical pro... 40 2.0
8ref|XM_669652.1| Plasmodium berghei strain ANKA hypothetical pro... 40 2.0
9ref|XM_672587.1| Plasmodium berghei strain ANKA hypothetical pro... 40 2.0
10gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 40 2.0
11gb|BC059263.1| Mus musculus integrator complex subunit 6, mRNA (... 40 2.0
12emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 2.0
13ref|NM_008715.2| Mus musculus integrator complex subunit 6 (Ints... 40 2.0
14gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete s... 40 2.0
15dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 2.0
16gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 2.0
17gb|AC151895.4| Mus musculus BAC clone RP24-323A22 from chromosom... 40 2.0
18gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 2.0
19gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 2.0
20gb|AC123530.4| Mus musculus BAC clone RP24-194D2 from chromosome... 40 2.0
21emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on ch... 40 2.0
22gb|AC160012.1| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 2.0
23dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 2.0
24dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 2.0
25emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 2.0
26emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 2.0
27emb|AL844548.7| Mouse DNA sequence from clone RP23-263D22 on chr... 40 2.0
28gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Canc... 40 2.0
29emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 2.0
30gb|AY706951.1| Gelidium serrulatum 16S ribosomal RNA gene, parti... 38 7.9
31gb|AY706939.1| Gelidiella acerosa 16S ribosomal RNA gene, partia... 38 7.9
32gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 7.9
33gb|AY662381.1| Uncultured bacterium clone LIW-22 particulate met... 38 7.9
34gb|AY662378.1| Uncultured bacterium clone LIW-19 particulate met... 38 7.9
35gb|BT014515.1| Lycopersicon esculentum clone 133903R, mRNA sequence 38 7.9
36gb|AC121860.4| Mus musculus BAC clone RP24-105K16 from chromosom... 38 7.9
37emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chr... 38 7.9
38gb|AC121585.3| Mus musculus BAC clone RP23-265M4 from 5, complet... 38 7.9
39gb|AC110530.10| Mus musculus chromosome 9, clone RP23-414K12, co... 38 7.9
40emb|AL355477.14| Human DNA sequence from clone RP11-113D13 on ch... 38 7.9
41gb|AC092905.10| Homo sapiens 3 BAC RP11-702L6 (Roswell Park Canc... 38 7.9
42emb|AL645971.12| Mouse DNA sequence from clone RP23-378J19 on ch... 38 7.9
43emb|BX294387.11| Zebrafish DNA sequence from clone DKEY-267L16 i... 38 7.9
44gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, co... 38 7.9
45gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome ... 38 7.9
46gb|AF303737.1|AF303737 Mus musculus enamelin gene, complete cds 38 7.9
47dbj|AK030954.1| Mus musculus adult male thymus cDNA, RIKEN full-... 38 7.9
48gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Can... 38 7.9
49emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, ... 38 7.9
50dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
51emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in ... 38 7.9
52gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom... 38 7.9
53dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
54emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in... 38 7.9
55gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Can... 38 7.9
56dbj|AP006540.1| Lotus japonicus genomic DNA, chromosome 2, clone... 38 7.9
57emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chro... 38 7.9 
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 134   ttacaggctaccacaaataatctg 157
             ||||||||||||||||||||||||
Sbjct: 57034 ttacaggctaccacaaataatctg 57011



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 40    aaagacattttgacactcagaaactaaagcta 71
             ||||||||||||||| | ||||||||| ||||
Sbjct: 57125 aaagacattttgacatttagaaactaacgcta 57094
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 134      ttacaggctaccacaaataatctg 157
                ||||||||||||||||||||||||
Sbjct: 34006138 ttacaggctaccacaaataatctg 34006115



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 40       aaagacattttgacactcagaaactaaagcta 71
                ||||||||||||||| | ||||||||| ||||
Sbjct: 34006229 aaagacattttgacatttagaaactaacgcta 34006198
to top
>dbj|AK067322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106F10, full
            insert sequence
          Length = 3431

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 134  ttacaggctaccacaaataatctg 157
            ||||||||||||||||||||||||
Sbjct: 3255 ttacaggctaccacaaataatctg 3232



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 40   aaagacattttgacactcagaaactaaagcta 71
            ||||||||||||||| | ||||||||| ||||
Sbjct: 3346 aaagacattttgacatttagaaactaacgcta 3315
to top
>dbj|AK066509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069K23, full
            insert sequence
          Length = 1640

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 134  ttacaggctaccacaaataatctg 157
            ||||||||||||||||||||||||
Sbjct: 1445 ttacaggctaccacaaataatctg 1422



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 40   aaagacattttgacactcagaaactaaagcta 71
            ||||||||||||||| | ||||||||| ||||
Sbjct: 1536 aaagacattttgacatttagaaactaacgcta 1505
to top
>gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosome 7, complete sequence
          Length = 196609

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    acatagcaagttacaggcta 143
              ||||||||||||||||||||
Sbjct: 171633 acatagcaagttacaggcta 171614
to top
>gb|AC123823.3| Mus musculus BAC clone RP24-63C11 from chromosome 7, complete sequence
          Length = 185494

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   acatagcaagttacaggcta 143
             ||||||||||||||||||||
Sbjct: 24053 acatagcaagttacaggcta 24034
to top
>ref|XM_667525.1| Plasmodium berghei strain ANKA hypothetical protein (PB301368.00.0)
           partial mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   actagatataaagctaactt 28
           ||||||||||||||||||||
Sbjct: 216 actagatataaagctaactt 197
to top
>ref|XM_669652.1| Plasmodium berghei strain ANKA hypothetical protein (PB000776.03.0)
           partial mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   actagatataaagctaactt 28
           ||||||||||||||||||||
Sbjct: 426 actagatataaagctaactt 407
to top
>ref|XM_672587.1| Plasmodium berghei strain ANKA hypothetical protein (PB000444.00.0)
           partial mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   actagatataaagctaactt 28
           ||||||||||||||||||||
Sbjct: 426 actagatataaagctaactt 407
to top
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    acatagcaagttacaggcta 143
              ||||||||||||||||||||
Sbjct: 175535 acatagcaagttacaggcta 175554
to top
>gb|BC059263.1| Mus musculus integrator complex subunit 6, mRNA (cDNA clone MGC:67608
            IMAGE:6409580), complete cds
          Length = 5019

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  acatagcaagttacaggcta 143
            ||||||||||||||||||||
Sbjct: 4521 acatagcaagttacaggcta 4540
to top
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17466 ggcactagatataaagctaa 17447
to top
>ref|NM_008715.2| Mus musculus integrator complex subunit 6 (Ints6), mRNA
          Length = 5019

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  acatagcaagttacaggcta 143
            ||||||||||||||||||||
Sbjct: 4521 acatagcaagttacaggcta 4540
to top
>gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete sequence
          Length = 114143

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   taccacaaataatctgactt 161
             ||||||||||||||||||||
Sbjct: 70660 taccacaaataatctgactt 70679
to top
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17473 ggcactagatataaagctaa 17454
to top
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17489 ggcactagatataaagctaa 17470
to top
>gb|AC151895.4| Mus musculus BAC clone RP24-323A22 from chromosome 10, complete
            sequence
          Length = 224442

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  acatagcaagttacaggcta 143
            ||||||||||||||||||||
Sbjct: 6675 acatagcaagttacaggcta 6694
to top
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17462 ggcactagatataaagctaa 17443
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17489 ggcactagatataaagctaa 17470
to top
>gb|AC123530.4| Mus musculus BAC clone RP24-194D2 from chromosome 10, complete sequence
          Length = 164420

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   acatagcaagttacaggcta 143
             ||||||||||||||||||||
Sbjct: 84198 acatagcaagttacaggcta 84217
to top
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete
             sequence
          Length = 180092

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   acatagcaagttacaggcta 143
             ||||||||||||||||||||
Sbjct: 46844 acatagcaagttacaggcta 46825
to top
>gb|AC160012.1| Medicago truncatula chromosome 2 BAC clone mth2-168l8, complete sequence
          Length = 145061

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    taccacaaataatctgactt 161
              ||||||||||||||||||||
Sbjct: 123486 taccacaaataatctgactt 123505
to top
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome,
             strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17466 ggcactagatataaagctaa 17447
to top
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17472 ggcactagatataaagctaa 17453
to top
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17454 ggcactagatataaagctaa 17435
to top
>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    acatagcaagttacaggcta 143
              ||||||||||||||||||||
Sbjct: 132625 acatagcaagttacaggcta 132644
to top
>emb|AL844548.7| Mouse DNA sequence from clone RP23-263D22 on chromosome 2, complete
            sequence
          Length = 198946

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  acatagcaagttacaggcta 143
            ||||||||||||||||||||
Sbjct: 8983 acatagcaagttacaggcta 8964
to top
>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187830

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   acatagcaagttacaggcta 143
             ||||||||||||||||||||
Sbjct: 35006 acatagcaagttacaggcta 35025
to top
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggcactagatataaagctaa 25
             ||||||||||||||||||||
Sbjct: 17448 ggcactagatataaagctaa 17429
to top
>gb|AY706951.1| Gelidium serrulatum 16S ribosomal RNA gene, partial sequence;
           plastid
          Length = 1354

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 50  tgacactcagaaactaaagctaa 72
           |||||||||||||| ||||||||
Sbjct: 627 tgacactcagaaacgaaagctaa 649
to top
>gb|AY706939.1| Gelidiella acerosa 16S ribosomal RNA gene, partial sequence;
           plastid
          Length = 1355

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 50  tgacactcagaaactaaagctaa 72
           |||||||||||||| ||||||||
Sbjct: 628 tgacactcagaaacgaaagctaa 650
to top
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    aatactgggcggcagccgt 120
              |||||||||||||||||||
Sbjct: 137166 aatactgggcggcagccgt 137184
to top
>gb|AY662381.1| Uncultured bacterium clone LIW-22 particulate methane monooxygenase
           (pmoA) gene, partial cds
          Length = 502

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 101 aaatactgggcggcagccg 119
           |||||||||||||||||||
Sbjct: 404 aaatactgggcggcagccg 422
to top
>gb|AY662378.1| Uncultured bacterium clone LIW-19 particulate methane monooxygenase
           (pmoA) gene, partial cds
          Length = 502

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 101 aaatactgggcggcagccg 119
           |||||||||||||||||||
Sbjct: 404 aaatactgggcggcagccg 422
to top
>gb|BT014515.1| Lycopersicon esculentum clone 133903R, mRNA sequence
          Length = 1904

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 11  tagatataaagctaacttt 29
           |||||||||||||||||||
Sbjct: 688 tagatataaagctaacttt 670
to top
>gb|AC121860.4| Mus musculus BAC clone RP24-105K16 from chromosome 15, complete
             sequence
          Length = 148328

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 120   ttacacatagcaagttacaggctacca 146
             |||||||||||||| | ||||||||||
Sbjct: 96246 ttacacatagcaagctccaggctacca 96220
to top
>emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chromosome 13, complete
              sequence
          Length = 210718

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     tcagaaactaaagctaaca 74
              |||||||||||||||||||
Sbjct: 163717 tcagaaactaaagctaaca 163735
to top
>gb|AC121585.3| Mus musculus BAC clone RP23-265M4 from 5, complete sequence
          Length = 195311

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    cacatagcaagttacaggc 141
              |||||||||||||||||||
Sbjct: 163374 cacatagcaagttacaggc 163392
to top
>gb|AC110530.10| Mus musculus chromosome 9, clone RP23-414K12, complete sequence
          Length = 207312

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 131    aagttacaggctaccacaaataa 153
              |||||||||||||||||| ||||
Sbjct: 169182 aagttacaggctaccacatataa 169204
to top
>emb|AL355477.14| Human DNA sequence from clone RP11-113D13 on chromosome 1 Contains the
             5' end of the MACF1 gene for microtubule-actin
             crosslinking factor 1 and two CpG islands, complete
             sequence
          Length = 63187

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 56    tcagaaactaaagctaacaacaa 78
             |||||||||||| ||||||||||
Sbjct: 40283 tcagaaactaaaactaacaacaa 40261
to top
>gb|AC092905.10| Homo sapiens 3 BAC RP11-702L6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151764

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     cattttgacactcagaaac 63
              |||||||||||||||||||
Sbjct: 106063 cattttgacactcagaaac 106081
to top
>emb|AL645971.12| Mouse DNA sequence from clone RP23-378J19 on chromosome 11 Vontains the
             5' end of the gene for novel protein similar to human RAP1
             GTPase activating protein 1 RAP1GA1,,a novel gene and
             three CpG islands, complete sequence
          Length = 102898

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   cacatagcaagttacaggc 141
             |||||||||||||||||||
Sbjct: 50151 cacatagcaagttacaggc 50169
to top
>emb|BX294387.11| Zebrafish DNA sequence from clone DKEY-267L16 in linkage group 9,
             complete sequence
          Length = 167582

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    aaactaaagctaacaacaa 78
             |||||||||||||||||||
Sbjct: 50266 aaactaaagctaacaacaa 50284
to top
>gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, complete sequence
          Length = 171770

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    cacatagcaagttacaggc 141
              |||||||||||||||||||
Sbjct: 168298 cacatagcaagttacaggc 168280
to top
>gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome 12, complete sequence
          Length = 225198

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 61     aactaaagctaacaacaac 79
              |||||||||||||||||||
Sbjct: 194153 aactaaagctaacaacaac 194171
to top
>gb|AF303737.1|AF303737 Mus musculus enamelin gene, complete cds
          Length = 24651

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   cacatagcaagttacaggc 141
             |||||||||||||||||||
Sbjct: 17839 cacatagcaagttacaggc 17857
to top
>dbj|AK030954.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830469B19 product:RNA polymerase II
           transcriptional coactivator, full insert sequence
          Length = 2476

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 120 ttacacatagcaagttacaggctacca 146
           |||||||||||||| | ||||||||||
Sbjct: 240 ttacacatagcaagctccaggctacca 214
to top
>gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 174662

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   cacatagcaagttacaggc 141
             |||||||||||||||||||
Sbjct: 98080 cacatagcaagttacaggc 98062
to top
>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence
          Length = 165319

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 142    taccacaaataatctgact 160
              |||||||||||||||||||
Sbjct: 111638 taccacaaataatctgact 111656
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 49      ttgacactcagaaactaaagcta 71
               ||||||||||||||| |||||||
Sbjct: 3971346 ttgacactcagaaacaaaagcta 3971368
to top
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete
              sequence
          Length = 211817

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     taaagctaacaacaactca 82
              |||||||||||||||||||
Sbjct: 149428 taaagctaacaacaactca 149410
to top
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete sequence
          Length = 146998

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     tcagaaactaaagctaaca 74
              |||||||||||||||||||
Sbjct: 128936 tcagaaactaaagctaaca 128918
to top
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0462E11
          Length = 166115

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 49    ttgacactcagaaactaaagcta 71
             ||||||||||||||| |||||||
Sbjct: 58643 ttgacactcagaaacaaaagcta 58665
to top
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4,
             complete sequence
          Length = 228177

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    taaagctaacaacaactca 82
             |||||||||||||||||||
Sbjct: 62338 taaagctaacaacaactca 62356
to top
>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197906

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 124    acatagcaagttacaggct 142
              |||||||||||||||||||
Sbjct: 108312 acatagcaagttacaggct 108294
to top
>dbj|AP006540.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01C03, TM0559,
             complete sequence
          Length = 80535

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    aaagacattttgacactca 58
             |||||||||||||||||||
Sbjct: 80471 aaagacattttgacactca 80453
to top
>emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chromosome 4, complete
              sequence
          Length = 210306

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    cacatagcaagttacaggc 141
              |||||||||||||||||||
Sbjct: 148707 cacatagcaagttacaggc 148689


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,205,603
Number of Sequences: 3902068
Number of extensions: 1205603
Number of successful extensions: 76576
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76338
Number of HSP's gapped (non-prelim): 238
length of query: 164
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 142
effective length of database: 17,147,199,772
effective search space: 2434902367624
effective search space used: 2434902367624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top