ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37f22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds Length = 777 Score = 1326 bits (669), Expect = 0.0 Identities = 678/680 (99%), Gaps = 1/680 (0%) Strand = Plus / Minus Query: 19 ccgagaagagatggcatgatctggagacatcgtacatgcatgccacctattaatctactt 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ccgagaagagatggcatgatctggagacatcgtacatgcatgccacctattaatctactt 658 Query: 79 gaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatac 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 gaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatac 598 Query: 139 accgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctggagcttgtc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 accgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctggagcttgtc 538 Query: 199 ggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcgccctcgtt 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 ggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcgccctcgtt 478 Query: 259 gaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagtccgatggc 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagtccgatggc 418 Query: 319 gccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtgagcgcgaa 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 gccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtgagcgcgaa 358 Query: 379 ggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggaggagcgggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 ggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggaggagcgggct 298 Query: 439 gacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgagggggctggaggt 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgagggggctggaggt 238 Query: 499 gacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggaccacttggt 558 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ga-ccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggaccacttggt 179 Query: 559 acgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtgagcgaag 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 acgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtgagcgaag 119 Query: 619 cgccggacatgccccgcggcttggagcacgccaagccgntcttcatcacctggctcgcca 678 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118 cgccggacatgccccgcggcttggagcacgccaagccgctcttcatcacctggctcgcca 59 Query: 679 tgggaggagcatatgcagtg 698 |||||||||||||||||||| Sbjct: 58 tgggaggagcatatgcagtg 39
>dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F01, full insert sequence Length = 932 Score = 688 bits (347), Expect = 0.0 Identities = 548/614 (89%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 699 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 640 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 639 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 580 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 579 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 520 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 519 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 460 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 459 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 400 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 399 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 340 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 339 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 280 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 279 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 221 Query: 551 cacttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggt 610 ||| |||||||| ||||| ||||||| || |||||||| |||||||||||||| || Sbjct: 220 cacctggtacgttggcttctcagactggatggccttgactgtgaagcggggcctccttgt 161 Query: 611 gagcgaagcgccggacatgccccgcggcttggagcacgccaagccgntcttcatcacctg 670 |||||||| || |||| |||| ||||||||||||| |||||| | ||||||||| ||| Sbjct: 160 cagcgaagcaccagacagccccctcggcttggagcacaccaagctgctcttcatcagctg 101 Query: 671 gctcgccatgggag 684 |||||||||||||| Sbjct: 100 gctcgccatgggag 87
>dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B01, full insert sequence Length = 985 Score = 688 bits (347), Expect = 0.0 Identities = 548/614 (89%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 721 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 662 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 661 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 602 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 601 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 542 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 541 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 482 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 481 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 422 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 421 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 362 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 361 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 302 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 301 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 243 Query: 551 cacttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggt 610 ||| |||||||| ||||| ||||||| || |||||||| |||||||||||||| || Sbjct: 242 cacctggtacgttggcttctcagactggatggccttgactgtgaagcggggcctccttgt 183 Query: 611 gagcgaagcgccggacatgccccgcggcttggagcacgccaagccgntcttcatcacctg 670 |||||||| || |||| |||| ||||||||||||| |||||| | ||||||||| ||| Sbjct: 182 cagcgaagcaccagacagccccctcggcttggagcacaccaagctgctcttcatcagctg 123 Query: 671 gctcgccatgggag 684 |||||||||||||| Sbjct: 122 gctcgccatgggag 109
>dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D08, full insert sequence Length = 923 Score = 680 bits (343), Expect = 0.0 Identities = 547/614 (89%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 629 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 570 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 569 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 510 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 509 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 450 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 449 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 390 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 389 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 330 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 329 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 271 Query: 551 cacttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggt 610 ||| |||||||| ||||| ||||||| || |||||| | |||||||||||||| || Sbjct: 270 cacctggtacgttggcttctcagactggatggccttggctgtgaagcggggcctccttgt 211 Query: 611 gagcgaagcgccggacatgccccgcggcttggagcacgccaagccgntcttcatcacctg 670 |||||||| || |||| |||| ||||||||||||| |||||| | ||||||||| ||| Sbjct: 210 cagcgaagcaccagacagccccctcggcttggagcacaccaagctgctcttcatcagctg 151 Query: 671 gctcgccatgggag 684 |||||||||||||| Sbjct: 150 gctcgccatgggag 137
>dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F07, full insert sequence Length = 964 Score = 680 bits (343), Expect = 0.0 Identities = 547/614 (89%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| | || Sbjct: 704 atctacttgaagaagtacgggagatcgagcacgtagaggaggaagtaggcccagaggacg 645 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 644 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 585 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 584 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 525 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 524 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 465 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 464 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 405 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 404 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 345 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 344 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 285 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 284 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 226 Query: 551 cacttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggt 610 ||| |||||||| ||||| ||||||| || |||||||| |||||||||||||| || Sbjct: 225 cacctggtacgttggcttctcagactggatggccttgactgtgaagcggggcctccttgt 166 Query: 611 gagcgaagcgccggacatgccccgcggcttggagcacgccaagccgntcttcatcacctg 670 |||||||| || |||| |||| ||||||||||||| |||||| | ||||||||| ||| Sbjct: 165 cagcgaagcaccagacagccccctcggcttggagcacaccaagctgctcttcatcagctg 106 Query: 671 gctcgccatgggag 684 |||||||||||||| Sbjct: 105 gctcgccatgggag 92
>dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A09, full insert sequence Length = 923 Score = 680 bits (343), Expect = 0.0 Identities = 547/614 (89%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 629 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 570 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 569 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 510 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 509 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 450 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 449 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 390 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 389 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 330 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 329 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 271 Query: 551 cacttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggt 610 ||| |||||||| ||||| ||||||| || |||||| | |||||||||||||| || Sbjct: 270 cacctggtacgttggcttctcagactggatggccttggctgtgaagcggggcctccttgt 211 Query: 611 gagcgaagcgccggacatgccccgcggcttggagcacgccaagccgntcttcatcacctg 670 |||||||| || |||| |||| ||||||||||||| |||||| | ||||||||| ||| Sbjct: 210 cagcgaagcaccagacagccccctcggcttggagcacaccaagctgctcttcatcagctg 151 Query: 671 gctcgccatgggag 684 |||||||||||||| Sbjct: 150 gctcgccatgggag 137
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 605 bits (305), Expect = e-170 Identities = 450/497 (90%), Gaps = 1/497 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 13161383 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13161324 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 13161323 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13161264 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 13161263 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 13161204 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 13161203 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 13161144 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 13161143 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 13161084 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 13161083 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 13161024 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 13161023 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 13160964 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 13160963 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 13160905 Query: 551 cacttggtacgtcggct 567 ||| |||||||| |||| Sbjct: 13160904 cacctggtacgttggct 13160888 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 593 gaagcggggcctccgggtgagcgaagcgccggacatgccccgcggcttggagcacgccaa 652 |||||||||||||| || |||||||| || |||| |||| ||||||||||||| |||| Sbjct: 13159889 gaagcggggcctccttgtcagcgaagcaccagacagccccctcggcttggagcacaccaa 13159830 Query: 653 gccgntcttcatcacctggctcgccatgggag 684 || | ||||||||| ||||||||||||||||| Sbjct: 13159829 gctgctcttcatcagctggctcgccatgggag 13159798
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 605 bits (305), Expect = e-170 Identities = 450/497 (90%), Gaps = 1/497 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 13115658 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13115599 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 13115598 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13115539 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 13115538 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 13115479 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 13115478 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 13115419 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 13115418 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 13115359 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 13115358 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 13115299 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 13115298 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 13115239 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 13115238 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 13115180 Query: 551 cacttggtacgtcggct 567 ||| |||||||| |||| Sbjct: 13115179 cacctggtacgttggct 13115163 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 593 gaagcggggcctccgggtgagcgaagcgccggacatgccccgcggcttggagcacgccaa 652 |||||||||||||| || |||||||| || |||| |||| ||||||||||||| |||| Sbjct: 13114164 gaagcggggcctccttgtcagcgaagcaccagacagccccctcggcttggagcacaccaa 13114105 Query: 653 gccgntcttcatcacctggctcgccatgggag 684 || | ||||||||| ||||||||||||||||| Sbjct: 13114104 gctgctcttcatcagctggctcgccatgggag 13114073
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 605 bits (305), Expect = e-170 Identities = 450/497 (90%), Gaps = 1/497 (0%) Strand = Plus / Plus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 169359 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 169418 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 169419 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 169478 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 169479 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 169538 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 169539 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 169598 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 169599 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 169658 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 169659 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 169718 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 169719 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 169778 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 169779 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 169837 Query: 551 cacttggtacgtcggct 567 ||| |||||||| |||| Sbjct: 169838 cacctggtacgttggct 169854 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 593 gaagcggggcctccgggtgagcgaagcgccggacatgccccgcggcttggagcacgccaa 652 |||||||||||||| || |||||||| || |||| |||| ||||||||||||| |||| Sbjct: 170853 gaagcggggcctccttgtcagcgaagcaccagacagccccctcggcttggagcacaccaa 170912 Query: 653 gccgntcttcatcacctggctcgccatgggag 684 || | ||||||||| ||||||||||||||||| Sbjct: 170913 gctgctcttcatcagctggctcgccatgggag 170944
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 605 bits (305), Expect = e-170 Identities = 450/497 (90%), Gaps = 1/497 (0%) Strand = Plus / Minus Query: 71 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 130 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 150586 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 150527 Query: 131 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 190 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 150526 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 150467 Query: 191 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 250 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 150466 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 150407 Query: 251 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 310 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 150406 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 150347 Query: 311 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 370 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 150346 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 150287 Query: 371 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 430 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 150286 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 150227 Query: 431 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 490 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 150226 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 150167 Query: 491 ctggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggac 550 |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 150166 ctggaggtca-ccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcac 150108 Query: 551 cacttggtacgtcggct 567 ||| |||||||| |||| Sbjct: 150107 cacctggtacgttggct 150091 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 593 gaagcggggcctccgggtgagcgaagcgccggacatgccccgcggcttggagcacgccaa 652 |||||||||||||| || |||||||| || |||| |||| ||||||||||||| |||| Sbjct: 149092 gaagcggggcctccttgtcagcgaagcaccagacagccccctcggcttggagcacaccaa 149033 Query: 653 gccgntcttcatcacctggctcgccatgggag 684 || | ||||||||| ||||||||||||||||| Sbjct: 149032 gctgctcttcatcagctggctcgccatgggag 149001
>gb|AY103985.1| Zea mays PCO103239 mRNA sequence Length = 1657 Score = 561 bits (283), Expect = e-156 Identities = 440/491 (89%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 72 tctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgc 131 |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||| Sbjct: 1499 tctacttgaagaagtaggggaggtcgagcacgtagaggagaaagtaggcccagagcacgc 1440 Query: 132 cggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgga 191 |||| | |||||||||||||| || |||||||||| | ||| || ||||||||||| | Sbjct: 1439 cggagatgccgccgaagaagaaccccccggtgaacttggcccagccgtcggcggtctgca 1380 Query: 192 gcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcgc 251 ||||||||||||||||||| | |||||||| |||||| ||||| |||||||| || | Sbjct: 1379 gcttgtcggcctccttcttcctgccggtgagcgtgagcgtgggcgccgtggacgggtccc 1320 Query: 252 cctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagtc 311 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1319 cctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgaggc 1260 Query: 312 cgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtga 371 || ||||||||| | ||||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 1259 cggcggcgccgagcgcgccggcctggccgtgcacgggcgtgctgcggagcgggcccgtga 1200 Query: 372 gcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagga 431 |||||||||| || |||||||||||||| || |||||||||||||||| ||| || || | Sbjct: 1199 gcgcgaagggccccacgaggaggtagccgtgcgcgaggccgacctcgacgccccgcagca 1140 Query: 432 gcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgagggggc 491 ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 1139 gcgggctcacggcggtgcggtaggccgggaggttggagaggtaccacgccacgagcgggc 1080 Query: 492 tggaggtgacccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 551 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1079 tggaggtga-ccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctgcacc 1021 Query: 552 acttggtacgt 562 || |||||||| Sbjct: 1020 acctggtacgt 1010 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 658 tcttcatcacctggctcgccatgggag 684 ||||||||||||||||||||||||||| Sbjct: 905 tcttcatcacctggctcgccatgggag 879
>dbj|AK063111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D07, full insert sequence Length = 470 Score = 89.7 bits (45), Expect = 1e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 593 gaagcggggcctccgggtgagcgaagcgccggacatgccccgcggcttggagcacgccaa 652 |||||||||||||| || |||||||| || |||| |||| ||||||||||||| |||| Sbjct: 200 gaagcggggcctccttgtcagcgaagcaccagacagccccctcggcttggagcacaccaa 141 Query: 653 gccgntcttcatcacctggctcgccatgggag 684 || | ||||||||| ||||||||||||||||| Sbjct: 140 gctgctcttcatcagctggctcgccatgggag 109
>emb|X57903.1|OS08RG10F O.sativa random single-copy DNA fragment 08RG108F Length = 162 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 72 tctacttgaagaagtatgggaggtcgagc-acgtagaggaggaagtatgcccaga 125 |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 109 tctacttgaagaagtacgggaggtcgagctacgtagaggaggaagtaggcccaga 55
>ref|NM_117349.2| Arabidopsis thaliana unknown protein AT4G12800 mRNA, complete cds Length = 984 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 458 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 399 Query: 482 a 482 | Sbjct: 398 a 398
>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35 Length = 199280 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 3165 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 3106 Query: 482 a 482 | Sbjct: 3105 a 3105
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 194272 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 194213 Query: 482 a 482 | Sbjct: 194212 a 194212
>emb|AL049640.1|ATT20K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T20K18 (ESSA project) Length = 79375 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 52660 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 52601 Query: 482 a 482 | Sbjct: 52600 a 52600
>emb|AJ245867.1|ATH245867 Arabidopsis thaliana mRNA for photosystem I subunit XI precursor Length = 928 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 426 ccgcggaggagagggttgacggcggtacggtaaccagggaggttggaaaggtaccacgcg 367 Query: 482 a 482 | Sbjct: 366 a 366
>gb|AY097427.1| Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 660 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 311 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 252 Query: 482 a 482 | Sbjct: 251 a 251
>gb|AF446350.1|AF446350 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 821 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 347 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 288 Query: 482 a 482 | Sbjct: 287 a 287
>gb|AY059949.1| Arabidopsis thaliana probable photosystem I chain XI precursor (At4g12800; T20K18.150) mRNA, complete cds Length = 853 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 353 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 294 Query: 482 a 482 | Sbjct: 293 a 293
>gb|AF428447.1|AF428447 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 842 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 347 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 288 Query: 482 a 482 | Sbjct: 287 a 287
>emb|BX826431.1|CNS0A4G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 823 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 333 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 274 Query: 482 a 482 | Sbjct: 273 a 273
>emb|BX826834.1|CNS0A38Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 762 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 334 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 275 Query: 482 a 482 | Sbjct: 274 a 274
>emb|BX826723.1|CNS0A3CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 816 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 328 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 269 Query: 482 a 482 | Sbjct: 268 a 268
>emb|BX826537.1|CNS0A35T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 309 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 250 Query: 482 a 482 | Sbjct: 249 a 249
>gb|AY087339.1| Arabidopsis thaliana clone 34400 mRNA, complete sequence Length = 944 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 459 ccgcggaggagagggttgacggcggtacggtaaccagggaggttggaaaggtaccacgcg 400 Query: 482 a 482 | Sbjct: 399 a 399
>emb|BX841515.1|CNS09YGY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 837 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 422 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 481 |||||||| || ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 349 ccgcggagaagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 290 Query: 482 a 482 | Sbjct: 289 a 289
>dbj|D50456.1|CUSPSAL Cucumis sativus mRNA for PsaL, complete cds Length = 812 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 70 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 125 ||||||||||| | |||| |||||||| | || |||||||||||||||||||||| Sbjct: 737 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 682
>dbj|D83007.1|CUSPSALG Cucumis sativus seedling cotyledon psaL mRNA for subunit of photosystem I, complete cds Length = 811 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 70 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 125 ||||||||||| | |||| |||||||| | || |||||||||||||||||||||| Sbjct: 674 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 619
>dbj|AB219568.1| Fragaria x ananassa FrPSI mRNA for photosystem I protein, partial cds Length = 404 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 178 ttcggcggtctggagcttgtcggcctccttcttgcgtccggt 219 ||||||||| ||||||| ||||| |||||||||||| ||||| Sbjct: 183 ttcggcggtttggagctggtcgggctccttcttgcggccggt 142
>emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photosystem I reaction center Length = 834 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 131 ccggatacaccgccgaagaagaagcctccggtgaact 167 ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 676 ccggaaacaccaccgaagaagaaccctccggtgaact 640
>ref|XM_363340.1| Magnaporthe grisea 70-15 hypothetical protein (MG01266.4) partial mRNA Length = 1611 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 ggcgtctccaggctgccgatga 525 |||||||||||||||||||||| Sbjct: 1007 ggcgtctccaggctgccgatga 1028
>gb|BT018644.1| Zea mays clone EL01N0505B01.d mRNA sequence Length = 1630 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ccatgggcgaggccgacctcg 418 ||||||||||||||||||||| Sbjct: 977 ccatgggcgaggccgacctcg 997
>ref|XM_726405.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00570) partial mRNA Length = 1050 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 456 cggggaggttggagaggtaccacgcgacg 484 ||||||||||||| |||||||||||||| Sbjct: 442 cggggaggttggaacggtaccacgcgacg 414
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 454 ggcggggaggttggagaggtaccacgcgacgag 486 |||| |||||||||||||| |||||||| |||| Sbjct: 16116536 ggcgcggaggttggagaggaaccacgcgtcgag 16116504
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 cggagcgggccagtgagcgcg 376 ||||||||||||||||||||| Sbjct: 4178375 cggagcgggccagtgagcgcg 4178355 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gggcgaggccgacctcgatg 421 |||||||||||||||||||| Sbjct: 8946158 gggcgaggccgacctcgatg 8946139
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ccggcgtctccaggctgccga 522 ||||||||||||||||||||| Sbjct: 1748 ccggcgtctccaggctgccga 1728
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 454 ggcggggaggttggagaggtaccacgcgacgag 486 |||| |||||||||||||| |||||||| |||| Sbjct: 54616 ggcgcggaggttggagaggaaccacgcgtcgag 54584
>dbj|AB039379.1| Streptomyces aureofaciens tcsD, tcsE, tcsF, tcsG, genes for beta-ketoacyl synthase, beta-ketoacyl synthase2, acyl carrier protein, asparagine synthase homolog, complete cds Length = 5188 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ccggcgcggtggacggctcgc 251 ||||||||||||||||||||| Sbjct: 2273 ccggcgcggtggacggctcgc 2293
>ref|NM_001037124.1| Danio rerio zgc:123341 (zgc:123341), mRNA Length = 1067 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tgaggcagacgctgaggatg 301 |||||||||||||||||||| Sbjct: 297 tgaggcagacgctgaggatg 316
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gcgaaggggccgacgaggag 393 |||||||||||||||||||| Sbjct: 96226 gcgaaggggccgacgaggag 96245
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ggccgacctcgatgccgcgg 427 |||||||||||||||||||| Sbjct: 2408079 ggccgacctcgatgccgcgg 2408060 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggcgaggccgacctcgatgc 422 |||||||||||||||||||| Sbjct: 577032 ggcgaggccgacctcgatgc 577051
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gcgaaggggccgacgaggag 393 |||||||||||||||||||| Sbjct: 5272 gcgaaggggccgacgaggag 5291
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 aggccgacctcgatgccgcggaggagcg 434 ||||||||||||| ||||| |||||||| Sbjct: 6617 aggccgacctcgacgccgctgaggagcg 6590
>ref|XM_656558.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4046.2), mRNA Length = 1476 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gatgggctggaccacttggt 558 |||||||||||||||||||| Sbjct: 908 gatgggctggaccacttggt 927
>gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complete sequence Length = 161199 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aatctacttgaagaagtatg 89 |||||||||||||||||||| Sbjct: 143165 aatctacttgaagaagtatg 143184
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ggccgacctcgatgccgcgg 427 |||||||||||||||||||| Sbjct: 3193784 ggccgacctcgatgccgcgg 3193803
>emb|AL391136.10| Human DNA sequence from clone RP11-304C14 on chromosome 10 Contains part of the TLL2 gene for tolloid-like 2, complete sequence Length = 66188 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ggaggttggagaggtaccac 478 |||||||||||||||||||| Sbjct: 62775 ggaggttggagaggtaccac 62756
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ttcggcggtctggagcttgtcggc 201 |||||||| ||||||||||||||| Sbjct: 1174925 ttcggcggactggagcttgtcggc 1174948
>emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the 3' end of the ACO2 gene for mitochondrial aconitase 2, the gene for a novel protein similar to yeast DNA-directed RNA Polymerase III 25 kD Polypeptide, the gene for the human ortholog of rat Pippin, the PMM1 gene for phosphomannomutase 1 (PMMH-22, yeast SEC53 ortholog), and two novel genes. Contains ESTs, STSs, GSSs and two putative CpG islands, complete sequence Length = 107818 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 agaggaggaagtatgcccag 124 |||||||||||||||||||| Sbjct: 64984 agaggaggaagtatgcccag 65003
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gccatgggcgaggccgacct 416 |||||||||||||||||||| Sbjct: 217167 gccatgggcgaggccgacct 217148
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gccatgggcgaggccgacct 416 |||||||||||||||||||| Sbjct: 215215 gccatgggcgaggccgacct 215196
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ggccgacctcgatgccgcgg 427 |||||||||||||||||||| Sbjct: 173429 ggccgacctcgatgccgcgg 173448
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 attaatctacttgaagaagt 86 |||||||||||||||||||| Sbjct: 781146 attaatctacttgaagaagt 781165
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ggccgacctcgatgccgcgg 427 |||||||||||||||||||| Sbjct: 2979673 ggccgacctcgatgccgcgg 2979654
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gcgaaggggccgacgaggag 393 |||||||||||||||||||| Sbjct: 18238013 gcgaaggggccgacgaggag 18238032
>gb|AY826885.1| Heterocapsa triquetra clone HTPSAL1 chloroplast photosystem I subunit XI mRNA, complete cds; nuclear gene for chloroplast product Length = 1197 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ggcgtgttgcggagcgggcc 366 |||||||||||||||||||| Sbjct: 911 ggcgtgttgcggagcgggcc 892
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 atgggcgaggccgacctcga 419 |||||||||||||||||||| Sbjct: 4350703 atgggcgaggccgacctcga 4350722
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ggccgacctcgatgccgcgg 427 |||||||||||||||||||| Sbjct: 5407675 ggccgacctcgatgccgcgg 5407694
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gcgaaggggccgacgaggag 393 |||||||||||||||||||| Sbjct: 18396910 gcgaaggggccgacgaggag 18396929
>gb|BC107646.1| Danio rerio zgc:123341, mRNA (cDNA clone MGC:123341 IMAGE:7413031), complete cds Length = 1067 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tgaggcagacgctgaggatg 301 |||||||||||||||||||| Sbjct: 297 tgaggcagacgctgaggatg 316
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence Length = 189097 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tcgtacatgcatgccaccta 67 |||||||||||||||||||| Sbjct: 81350 tcgtacatgcatgccaccta 81369
>emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on chromosome 2, complete sequence Length = 209560 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aatctacttgaagaagtatg 89 |||||||||||||||||||| Sbjct: 121761 aatctacttgaagaagtatg 121780 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,890,238 Number of Sequences: 3902068 Number of extensions: 3890238 Number of successful extensions: 69855 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68474 Number of HSP's gapped (non-prelim): 1367 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
