| Clone Name | rbaal37f17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 6e-32 Identities = 106/117 (90%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||||| Sbjct: 907066 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaagc 907007 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 907006 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 906950 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | ||| ||| ||||| ||| |||||| ||| Sbjct: 907416 tctagaacatagaccaccaactctttttggtgtccacatgtacttcagtggcacttgggg 907357 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||| ||||||| |||||| |||||||||| Sbjct: 907356 atctacagtacagttgccttctaccactcctagcgggatttgtaaagcataaaactagag 907297 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| | |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 907296 cgaaaccgatgaggcttacaactggagcagcagcaataaaaagccatccactgcgcctgc 907237 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||||||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 907236 gtgcactgtttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 907179
>dbj|AK073862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073H23, full insert sequence Length = 2236 Score = 147 bits (74), Expect = 6e-32 Identities = 106/117 (90%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||||| Sbjct: 1633 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaagc 1574 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1573 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 1517 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | ||| ||| ||||| ||| |||||| ||| Sbjct: 1983 tctagaacatagaccaccaactctttttggtgtccacatgtacttcagtggcacttgggg 1924 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||| ||||||| |||||| |||||||||| Sbjct: 1923 atctacagtacagttgccttctaccactcctagcgggatttgtaaagcataaaactagag 1864 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| | |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 1863 cgaaaccgatgaggcttacaactggagcagcagcaataaaaagccatccactgcgcctgc 1804 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||||||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 1803 gtgcactgtttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 1746
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 6e-32 Identities = 106/117 (90%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||||| Sbjct: 907066 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaagc 907007 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 907006 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 906950 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | ||| ||| ||||| ||| |||||| ||| Sbjct: 907416 tctagaacatagaccaccaactctttttggtgtccacatgtacttcagtggcacttgggg 907357 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||| ||||||| |||||| |||||||||| Sbjct: 907356 atctacagtacagttgccttctaccactcctagcgggatttgtaaagcataaaactagag 907297 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| | |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 907296 cgaaaccgatgaggcttacaactggagcagcagcaataaaaagccatccactgcgcctgc 907237 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||||||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 907236 gtgcactgtttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 907179
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 147 bits (74), Expect = 6e-32 Identities = 106/117 (90%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||||| Sbjct: 44651 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaagc 44592 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 44591 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 44535 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | ||| ||| ||||| ||| |||||| ||| Sbjct: 45001 tctagaacatagaccaccaactctttttggtgtccacatgtacttcagtggcacttgggg 44942 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||| ||||||| |||||| |||||||||| Sbjct: 44941 atctacagtacagttgccttctaccactcctagcgggatttgtaaagcataaaactagag 44882 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| | |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 44881 cgaaaccgatgaggcttacaactggagcagcagcaataaaaagccatccactgcgcctgc 44822 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||||||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 44821 gtgcactgtttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 44764
>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0048P17, complete sequence Length = 149883 Score = 139 bits (70), Expect = 1e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||| | Sbjct: 24620 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaaac 24561 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 24560 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 24504 Score = 107 bits (54), Expect = 5e-20 Identities = 192/238 (80%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | | ||| ||||| ||| |||||| ||| Sbjct: 24970 tctagaacatagaccaccaactctttttggtacccacatgtacttcagtggcacttgggg 24911 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||||||||||| |||||| |||||||||| Sbjct: 24910 atctacagtacagttgccttctaccactcctagcaggatttgtaaagcataaaactagag 24851 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| || |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 24850 cgaaaccgataaggcttacgactggagcagcagcaataaaaagccatccactgcgcctgc 24791 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||| ||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 24790 gtgcactgcttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 24733
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 139 bits (70), Expect = 1e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||| | Sbjct: 857048 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaaac 856989 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 856988 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 856932 Score = 107 bits (54), Expect = 5e-20 Identities = 192/238 (80%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | | ||| ||||| ||| |||||| ||| Sbjct: 857398 tctagaacatagaccaccaactctttttggtacccacatgtacttcagtggcacttgggg 857339 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||||||||||| |||||| |||||||||| Sbjct: 857338 atctacagtacagttgccttctaccactcctagcaggatttgtaaagcataaaactagag 857279 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| || |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 857278 cgaaaccgataaggcttacgactggagcagcagcaataaaaagccatccactgcgcctgc 857219 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||| ||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 857218 gtgcactgcttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 857161
>dbj|AK103124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119L05, full insert sequence Length = 3311 Score = 139 bits (70), Expect = 1e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||| | Sbjct: 1390 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaaac 1331 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1330 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 1274 Score = 107 bits (54), Expect = 5e-20 Identities = 192/238 (80%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | | ||| ||||| ||| |||||| ||| Sbjct: 1740 tctagaacatagaccaccaactctttttggtacccacatgtacttcagtggcacttgggg 1681 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||||||||||| |||||| |||||||||| Sbjct: 1680 atctacagtacagttgccttctaccactcctagcaggatttgtaaagcataaaactagag 1621 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| || |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 1620 cgaaaccgataaggcttacgactggagcagcagcaataaaaagccatccactgcgcctgc 1561 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||| ||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 1560 gtgcactgcttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 1503
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 139 bits (70), Expect = 1e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 566 tctggatcatctgtaggaagttcatatcggcaaactgggcatgtattcctggaactaagc 625 |||| ||||||||||||||| ||||||||||| || || |||||||| || ||||||| | Sbjct: 857050 tctgcatcatctgtaggaagctcatatcggcagacaggacatgtatttctagaactaaac 856991 Query: 626 cacggcaagatgcacgacgaatgatatagatgcatgcatggtagctgntttgctcta 682 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 856990 catggcaagatgcacgatgaatgataaagatgcatgcatggtagctgttttgctcta 856934 Score = 107 bits (54), Expect = 5e-20 Identities = 192/238 (80%) Strand = Plus / Minus Query: 186 tctagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctggg 245 |||||||||| ||||||||||| |||| | | ||| ||||| ||| |||||| ||| Sbjct: 857400 tctagaacatagaccaccaactctttttggtacccacatgtacttcagtggcacttgggg 857341 Query: 246 atccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagag 305 ||| || ||||| ||||||||||||| ||||||||||||| |||||| |||||||||| Sbjct: 857340 atctacagtacagttgccttctaccactcctagcaggatttgtaaagcataaaactagag 857281 Query: 306 ctaaaccgacaaagcttactgctggagcaactgcaataaacagccatcgacggtgggcac 365 | ||||||| || |||||| |||||||| | |||||||| ||||||| || | | | Sbjct: 857280 cgaaaccgataaggcttacgactggagcagcagcaataaaaagccatccactgcgcctgc 857221 Query: 366 gtgctctgtttgactgctcagcaacatgaacaccatgttcacttgtattagtcacttc 423 |||| ||| ||| |||||| ||||| ||||| |||||||||||||||||| |||| Sbjct: 857220 gtgcactgcttggttgctcatcaacacgaacattgtgttcacttgtattagtctcttc 857163
>gb|AY109109.1| Zea mays PCO117757 mRNA sequence Length = 514 Score = 91.7 bits (46), Expect = 3e-15 Identities = 136/166 (81%) Strand = Plus / Minus Query: 188 tagaacatggaccaccaacttctttttgagtctacaagtactgcagaggcactctgggat 247 |||||||| ||||||||||||||| ||| ||||||| || | | || || | ||||||| Sbjct: 340 tagaacatagaccaccaacttcttcttgtgtctacatgtgccgtagtggtagtctgggac 281 Query: 248 ccacgacacagtcgccttctaccactactagcaggatttgcaaagcacaaaactagagct 307 | ||| |||| | |||| ||| || | | ||||||||| | |||||||||||||||||| Sbjct: 280 ctacggcacaattgcctcctaacattgccagcaggattggtgaagcacaaaactagagct 221 Query: 308 aaaccgacaaagcttactgctggagcaactgcaataaacagccatc 353 |||| ||||| ||||| ||||||| |||||||||||||||||| Sbjct: 220 aaactgacaagacttacaactggagctgctgcaataaacagccatc 175
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 572 tcatctgtaggaagttcatatcggcaaactgggcatgtattcct 615 ||||| |||||||| ||||| |||||||| || ||||||||||| Sbjct: 66959 tcatcagtaggaagctcataccggcaaaccggacatgtattcct 66916
>gb|AC003078.1| Homo sapiens BAC clone GS1-117O10 from 7, complete sequence Length = 182433 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 caacatgaacaccatgttcact 408 |||||||||||||||||||||| Sbjct: 69642 caacatgaacaccatgttcact 69663
>gb|AC142298.1| Pan troglodytes BAC clone RP43-99N14 from 7, complete sequence Length = 162900 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 caacatgaacaccatgttcact 408 |||||||||||||||||||||| Sbjct: 54777 caacatgaacaccatgttcact 54798
>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16, complete sequence Length = 199070 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 528 ctctttcatttgctgcagctcg 549 |||||||||||||||||||||| Sbjct: 33085 ctctttcatttgctgcagctcg 33106
>gb|AY781116.1| Cricetulus longicaudatus clone 16.3 protein arginine methyltransferase 7 mRNA, complete cds, alternatively spliced Length = 3111 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 1841 cagaggcactctgggatccac 1821
>gb|AY781115.1| Cricetulus longicaudatus clone 11.3 protein arginine methyltransferase 7 alpha mRNA, complete cds, alternatively spliced Length = 3579 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 2192 cagaggcactctgggatccac 2172
>gb|AY781114.1| Cricetulus longicaudatus clone 6.2 protein arginine methyltransferase 7 alpha mRNA, complete cds, alternatively spliced Length = 3401 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 2118 cagaggcactctgggatccac 2098
>gb|AY781113.1| Cricetulus longicaudatus clone 8.1 protein arginine methyltransferase 7 alpha mRNA, complete cds, alternatively spliced Length = 2264 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 2113 cagaggcactctgggatccac 2093
>gb|AC133908.7| Mus musculus chromosome 5, clone RP24-299L9, complete sequence Length = 214270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 catggacatctctttcatttg 539 ||||||||||||||||||||| Sbjct: 213340 catggacatctctttcatttg 213360
>gb|AY238344.1| Rattus norvegicus non-erythroid spectrin beta mRNA, complete cds Length = 7332 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 catcataagacatgtcctgag 449 ||||||||||||||||||||| Sbjct: 4038 catcataagacatgtcctgag 4018
>gb|AF336045.1| Cricetulus longicaudatus arginine N-methyltransferase mRNA, partial sequence Length = 2511 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 2341 cagaggcactctgggatccac 2321
>gb|AF336044.1| Cricetulus longicaudatus arginine N-methyltransferase p78 isoform mRNA, complete cds, alternatively spliced Length = 3214 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 2156 cagaggcactctgggatccac 2136
>gb|AF336043.1| Cricetulus longicaudatus arginine N-methyltransferase p82 isoform mRNA, complete cds, alternatively spliced Length = 2320 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cagaggcactctgggatccac 251 ||||||||||||||||||||| Sbjct: 2136 cagaggcactctgggatccac 2116
>gb|AC127327.4| Mus musculus BAC clone RP23-254M18 from 5, complete sequence Length = 198433 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 catggacatctctttcatttg 539 ||||||||||||||||||||| Sbjct: 120570 catggacatctctttcatttg 120590
>emb|AL645584.27| Mouse DNA sequence from clone RP23-280M7 on chromosome 1 Contains a novel gene and two CpG islands, complete sequence Length = 171382 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 attgatcaaaacttcaaaccaaact 106 |||||||| |||||||||||||||| Sbjct: 149646 attgatcacaacttcaaaccaaact 149622
>emb|BX323016.9| Zebrafish DNA sequence from clone CH211-273L18 in linkage group 6, complete sequence Length = 45653 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 atcaaaacttcaaaccaaacttttt 110 |||||||||||| |||||||||||| Sbjct: 39806 atcaaaacttcataccaaacttttt 39830
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aaacttcaaaccaaacttttt 110 ||||||||||||||||||||| Sbjct: 71298 aaacttcaaaccaaacttttt 71318
>emb|BX927227.11| Zebrafish DNA sequence from clone CH211-127D13 in linkage group 5, complete sequence Length = 135384 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aaacttcaaaccaaacttttt 110 ||||||||||||||||||||| Sbjct: 118077 aaacttcaaaccaaacttttt 118097
>emb|BX942820.7| Zebrafish DNA sequence from clone CH211-222L23 in linkage group 18, complete sequence Length = 114084 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 tgctcagcaacatgaacacca 400 ||||||||||||||||||||| Sbjct: 59910 tgctcagcaacatgaacacca 59890
>emb|BX548035.8| Zebrafish DNA sequence from clone CH211-190F24 in linkage group 24, complete sequence Length = 156349 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aaacttcaaaccaaacttttt 110 ||||||||||||||||||||| Sbjct: 53738 aaacttcaaaccaaacttttt 53758
>ref|NM_001013130.1| Rattus norvegicus spectrin beta 2 (Spnb2), mRNA Length = 7332 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 catcataagacatgtcctgag 449 ||||||||||||||||||||| Sbjct: 4038 catcataagacatgtcctgag 4018
>emb|BX284646.4| Zebrafish DNA sequence from clone CH211-49J11 in linkage group 5, complete sequence Length = 182774 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaacttcaaaccaaacttttt 110 ||||||||||||||||||||| Sbjct: 69173 aaacttcaaaccaaacttttt 69153
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaacttcaaaccaaacttttt 110 ||||||||||||||||||||| Sbjct: 146511 aaacttcaaaccaaacttttt 146491
>emb|BX908791.12| Zebrafish DNA sequence from clone DKEY-261H15 in linkage group 18, complete sequence Length = 66694 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 atcaaaacttcaaaccaaacttttt 110 |||||||||||||||||||| |||| Sbjct: 33975 atcaaaacttcaaaccaaacctttt 33951
>emb|BX247867.7| Zebrafish DNA sequence from clone CH211-268D5 in linkage group 24, complete sequence Length = 146928 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aaacttcaaaccaaacttttt 110 ||||||||||||||||||||| Sbjct: 114753 aaacttcaaaccaaacttttt 114773
>gb|AC147061.3| Pan troglodytes BAC clone RP43-156P2 from 7, complete sequence Length = 148371 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 atcaaaacttcaaaccaaactttt 109 ||||||||||||||| |||||||| Sbjct: 129234 atcaaaacttcaaacaaaactttt 129257
>ref|XM_453515.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D10197g predicted mRNA Length = 2571 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gtggaaaatatatagttttc 40 |||||||||||||||||||| Sbjct: 1237 gtggaaaatatatagttttc 1218
>gb|AF049895.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 331864 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcatcagaaccttcttcacc 486 |||||||||||||||||||| Sbjct: 60925 tcatcagaaccttcttcacc 60944
>gb|AY224050.1| Zea mays strain A69Y clone MMP9 endosperm-specific maternally demethylated fragment Length = 583 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ctggagcaactgcaataaac 346 |||||||||||||||||||| Sbjct: 451 ctggagcaactgcaataaac 470
>emb|BX088693.15| Zebrafish DNA sequence from clone CH211-212E22 in linkage group 2, complete sequence Length = 150021 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 caaaacttcaaaccaaacttttta 111 |||||||||| ||||||||||||| Sbjct: 123154 caaaacttcataccaaacttttta 123131
>emb|CR450788.7| Zebrafish DNA sequence from clone DKEY-15P23 in linkage group 12, complete sequence Length = 115480 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 16842 tgctcagcaacatgaacacc 16861
>emb|BX324230.15| Zebrafish DNA sequence from clone CH211-42C5 in linkage group 7, complete sequence Length = 179902 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 8555 tgctcagcaacatgaacacc 8574
>emb|CR388371.8| Zebrafish DNA sequence from clone DKEY-78N12 in linkage group 6, complete sequence Length = 185878 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 61880 tgctcagcaacatgaacacc 61861
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gtggaaaatatatagttttc 40 |||||||||||||||||||| Sbjct: 863060 gtggaaaatatatagttttc 863079
>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence Length = 203826 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gacatgtcctgagtttcttc 456 |||||||||||||||||||| Sbjct: 95744 gacatgtcctgagtttcttc 95763
>emb|CR589943.13| Zebrafish DNA sequence from clone DKEYP-73C8 in linkage group 18, complete sequence Length = 179531 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 88229 tgctcagcaacatgaacacc 88248
>emb|CR450721.6| Zebrafish DNA sequence from clone DKEY-206H7 in linkage group 8, complete sequence Length = 74608 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 23662 tgctcagcaacatgaacacc 23643
>emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in linkage group 21, complete sequence Length = 263757 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 179972 tgctcagcaacatgaacacc 179991
>dbj|AB224682.1| Aspergillus oryzae cDNA, contig sequence: AoEST1531 Length = 705 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 385 agcaacatgaacaccatgttcacttgta 412 |||| |||||||||||||||||| |||| Sbjct: 491 agcaccatgaacaccatgttcacctgta 464
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 385 agcaacatgaacaccatgttcacttgta 412 |||| |||||||||||||||||| |||| Sbjct: 2802308 agcaccatgaacaccatgttcacctgta 2802281
>emb|BX571780.9| Zebrafish DNA sequence from clone CH211-139O3 in linkage group 3, complete sequence Length = 72970 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 aaaacttcaaaccaaacttt 108 |||||||||||||||||||| Sbjct: 46051 aaaacttcaaaccaaacttt 46032
>emb|AL954641.12| Zebrafish DNA sequence from clone CH211-278J9 in linkage group 2, complete sequence Length = 167140 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 caaaacttcaaaccaaacttttta 111 |||||||||| ||||||||||||| Sbjct: 141982 caaaacttcataccaaacttttta 142005
>emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in linkage group 21, complete sequence Length = 207125 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 178156 tgctcagcaacatgaacacc 178175
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 agttcatatcggcaaactgg 603 |||||||||||||||||||| Sbjct: 7090448 agttcatatcggcaaactgg 7090467
>gb|AC010745.4| Homo sapiens BAC clone RP11-549D18 from 2, complete sequence Length = 189894 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tttagggagaaagcactgcc 127 |||||||||||||||||||| Sbjct: 71297 tttagggagaaagcactgcc 71316
>gb|AC103726.5| Homo sapiens chromosome 8, clone RP11-737F9, complete sequence Length = 143480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 atatagttttctcggttacaggaa 53 |||| ||||||||||||||||||| Sbjct: 39901 atatggttttctcggttacaggaa 39878
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 agttcatatcggcaaactgg 603 |||||||||||||||||||| Sbjct: 111235 agttcatatcggcaaactgg 111254
>gb|AY366206.1| Pinus sylvestris 1-aminocyclopropane-1-carboxylate synthase 2 mRNA, partial cds Length = 1095 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cttactgctggagcaactgc 339 |||||||||||||||||||| Sbjct: 220 cttactgctggagcaactgc 239
>dbj|BS000042.1| Pan troglodytes chromosome 22 clone:RP43-149B05, map 22, complete sequences Length = 163377 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 tcatctgtaggaagttcata 591 |||||||||||||||||||| Sbjct: 69986 tcatctgtaggaagttcata 69967
>gb|AC004612.1|AC004612 Homo sapiens PAC clone RP1-318J7 from 8q21, complete sequence Length = 88295 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcatcagaaccttcttcacc 486 |||||||||||||||||||| Sbjct: 15735 tcatcagaaccttcttcacc 15754
>emb|AL954687.17| Zebrafish DNA sequence from clone CH211-202B2 in linkage group 19, complete sequence Length = 191582 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 126323 tgctcagcaacatgaacacc 126304
>emb|BX284625.4| Zebrafish DNA sequence from clone DKEYP-55F12 in linkage group 20, complete sequence Length = 98852 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgctcagcaacatgaacacc 399 |||||||||||||||||||| Sbjct: 14107 tgctcagcaacatgaacacc 14088
>gb|AY109523.1| Zea mays CL765_1 mRNA sequence Length = 1412 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 542 gcagctcgctcaggcctctcggattctg 569 |||||| |||||| |||||||||||||| Sbjct: 1245 gcagcttgctcagacctctcggattctg 1218
>gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 containing NBS1 gene, complete sequence Length = 184919 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcatcagaaccttcttcacc 486 |||||||||||||||||||| Sbjct: 148849 tcatcagaaccttcttcacc 148868
>dbj|AP005887.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1252A6, complete sequence Length = 149431 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 atatagttttctcggttacaggaa 53 |||| ||||||||||||||||||| Sbjct: 46898 atatggttttctcggttacaggaa 46921
>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151119 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gatcaaaacttcaaaccaaa 104 |||||||||||||||||||| Sbjct: 70210 gatcaaaacttcaaaccaaa 70229
>emb|BX470255.18| Zebrafish DNA sequence from clone DKEY-76A14 in linkage group 1, complete sequence Length = 203708 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 aaacttcaaaccaaactttt 109 |||||||||||||||||||| Sbjct: 132251 aaacttcaaaccaaactttt 132270 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,353,824 Number of Sequences: 3902068 Number of extensions: 6353824 Number of successful extensions: 128942 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128500 Number of HSP's gapped (non-prelim): 441 length of query: 682 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 659 effective length of database: 17,143,297,704 effective search space: 11297433186936 effective search space used: 11297433186936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)