ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37f13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK101974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
2ref|NM_191835.1| Oryza sativa (japonica cultivar-group), predic... 317 2e-83
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
4dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
5gb|AY112057.1| Zea mays CL35196_2 mRNA sequence 113 7e-22
6ref|NM_148725.2| Arabidopsis thaliana SPA3 (SPA1-RELATED 3); ATP... 62 2e-06
7ref|NM_104188.2| Arabidopsis thaliana SPA4 (SPA1-RELATED 4); ATP... 56 1e-04
8ref|NM_179471.1| Arabidopsis thaliana SPA4 (SPA1-RELATED 4); ATP... 56 1e-04
9gb|AY133883.1| Arabidopsis thaliana clone U10199 putative phytoc... 56 1e-04
10gb|AY040023.1| Arabidopsis thaliana putative phytochrome A supre... 56 1e-04
11gb|AC022520.2|AC022520 Arabidopsis thaliana chromosome I BAC F8L... 54 5e-04
12ref|NM_202590.1| Arabidopsis thaliana acetylglucosaminyltransfer... 50 0.008
13ref|NM_112398.2| Arabidopsis thaliana acetylglucosaminyltransfer... 50 0.008
14dbj|AP000413.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 50 0.008
15gb|AF538193.1| Euphorbia poissonii NADH dehydrogenase subunit F ... 48 0.033
16gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds 42 2.0
17gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer... 40 8.0
18gb|BC073044.1| Xenopus laevis MGC82660 protein, mRNA (cDNA clone... 40 8.0
19gb|AC094784.13| Rattus norvegicus 11 BAC CH230-4O6 (Children's H... 40 8.0
20emb|AL356578.22| Human DNA sequence from clone RP11-14G9 on chro... 40 8.0
21emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chro... 40 8.0
22gb|AC018924.9| Homo sapiens chromosome 15 clone RP11-355D13 map ... 40 8.0
23gb|AC112221.2| Homo sapiens chromosome 3 clone RP11-11C8, comple... 40 8.0
24gb|AC019011.7| Homo sapiens chromosome 15 clone RP11-78I21 map 1... 40 8.0
25gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Canc... 40 8.0
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
27gb|AC092623.2| Homo sapiens BAC clone RP11-260E12 from 2, comple... 40 8.0
28gb|AF538202.1| Euphorbia meenae NADH dehydrogenase subunit F (nd... 40 8.0
29gb|AF538194.1| Euphorbia abdelkuri NADH dehydrogenase subunit F ... 40 8.0
30dbj|AK068705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
31gb|AC154464.2| Mus musculus BAC clone RP24-146B1 from 16, comple... 40 8.0
32emb|BX323877.4| Zebrafish DNA sequence from clone DKEYP-96F6 in ... 40 8.0
33emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 8.0
34emb|AL590415.7| Mouse DNA sequence from clone RP23-97B17 on chro... 40 8.0
35gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0

>dbj|AK101974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N16, full
            insert sequence
          Length = 3427

 Score =  321 bits (162), Expect = 1e-84
 Identities = 264/298 (88%)
 Strand = Plus / Minus

                                                                        
Query: 276  ggtcagtccatttctaacaccttaatgttcccactggagttagcagaaagaagtgtcgaa 335
            ||||||||||||||||| |  ||||||||||| ||||| |||||||||||||| || || 
Sbjct: 3078 ggtcagtccatttctaagattttaatgttcccgctggaattagcagaaagaagcgttgag 3019

                                                                        
Query: 336  gactgccccctccaacacacgcacgaaatgaactgcgattgatcatcgatctcctggcct 395
            |||||||| |||||||||||||| ||||||||||| ||| |||| || ||||||||||||
Sbjct: 3018 gactgccctctccaacacacgcatgaaatgaactgtgatggatcgtcaatctcctggcct 2959

                                                                        
Query: 396  gaaattgggtctgtgacgttgaacttatacgccaagactggcattggaaatgctttgtgg 455
            || ||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2958 gatattgggtctgtgacactgaatttatatgccaagactggcattggaaatgctttgtgg 2899

                                                                        
Query: 456  tagacgaaaacctcatttgtttctgacccagtagcaatgtacccatcagaaatggaaagg 515
            ||||| |||||||||||||| ||||| |||||||||||||| |||||||| || ||||| 
Sbjct: 2898 tagacaaaaacctcatttgtctctgagccagtagcaatgtaaccatcagatatagaaagt 2839

                                                                      
Query: 516  ccaacaaaattctttgtatttgtatggcctgtaaaagtctgaattggattgtcaatta 573
            |||||||||||||| || |||||||| |||||||| ||| |||  ||| |||||||||
Sbjct: 2838 ccaacaaaattcttagtgtttgtatgacctgtaaatgtccgaagcggactgtcaatta 2781



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>ref|NM_191835.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2430

 Score =  317 bits (160), Expect = 2e-83
 Identities = 262/296 (88%)
 Strand = Plus / Minus

                                                                        
Query: 278  tcagtccatttctaacaccttaatgttcccactggagttagcagaaagaagtgtcgaaga 337
            ||||||||||||||| |  ||||||||||| ||||| |||||||||||||| || || ||
Sbjct: 2430 tcagtccatttctaagattttaatgttcccgctggaattagcagaaagaagcgttgagga 2371

                                                                        
Query: 338  ctgccccctccaacacacgcacgaaatgaactgcgattgatcatcgatctcctggcctga 397
            |||||| |||||||||||||| ||||||||||| ||| |||| || ||||||||||||||
Sbjct: 2370 ctgccctctccaacacacgcatgaaatgaactgtgatggatcgtcaatctcctggcctga 2311

                                                                        
Query: 398  aattgggtctgtgacgttgaacttatacgccaagactggcattggaaatgctttgtggta 457
             ||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2310 tattgggtctgtgacactgaatttatatgccaagactggcattggaaatgctttgtggta 2251

                                                                        
Query: 458  gacgaaaacctcatttgtttctgacccagtagcaatgtacccatcagaaatggaaaggcc 517
            ||| |||||||||||||| ||||| |||||||||||||| |||||||| || ||||| ||
Sbjct: 2250 gacaaaaacctcatttgtctctgagccagtagcaatgtaaccatcagatatagaaagtcc 2191

                                                                    
Query: 518  aacaaaattctttgtatttgtatggcctgtaaaagtctgaattggattgtcaatta 573
            |||||||||||| || |||||||| |||||||| ||| |||  ||| |||||||||
Sbjct: 2190 aacaaaattcttagtgtttgtatgacctgtaaatgtccgaagcggactgtcaatta 2135



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  224 bits (113), Expect = 3e-55
 Identities = 173/193 (89%)
 Strand = Plus / Minus

                                                                            
Query: 276      ggtcagtccatttctaacaccttaatgttcccactggagttagcagaaagaagtgtcgaa 335
                ||||||||||||||||| |  ||||||||||| ||||| |||||||||||||| || || 
Sbjct: 30256273 ggtcagtccatttctaagattttaatgttcccgctggaattagcagaaagaagcgttgag 30256214

                                                                            
Query: 336      gactgccccctccaacacacgcacgaaatgaactgcgattgatcatcgatctcctggcct 395
                |||||||| |||||||||||||| ||||||||||| ||| |||| || ||||||||||||
Sbjct: 30256213 gactgccctctccaacacacgcatgaaatgaactgtgatggatcgtcaatctcctggcct 30256154

                                                                            
Query: 396      gaaattgggtctgtgacgttgaacttatacgccaagactggcattggaaatgctttgtgg 455
                || ||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 30256153 gatattgggtctgtgacactgaatttatatgccaagactggcattggaaatgctttgtgg 30256094

                             
Query: 456      tagacgaaaacct 468
                ||||| |||||||
Sbjct: 30256093 tagacaaaaacct 30256081



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 465      acctcatttgtttctgacccagtagcaatgtacccatcagaaatggaaaggccaacaaaa 524
                ||||||||||| ||||| |||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 30255559 acctcatttgtctctgagccagtagcaatgtaaccatcagatatagaaagtccaacaaaa 30255500

                    
Query: 525      ttct 528
                ||||
Sbjct: 30255499 ttct 30255496



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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0042A10
          Length = 146840

 Score =  224 bits (113), Expect = 3e-55
 Identities = 173/193 (89%)
 Strand = Plus / Minus

                                                                         
Query: 276   ggtcagtccatttctaacaccttaatgttcccactggagttagcagaaagaagtgtcgaa 335
             ||||||||||||||||| |  ||||||||||| ||||| |||||||||||||| || || 
Sbjct: 44592 ggtcagtccatttctaagattttaatgttcccgctggaattagcagaaagaagcgttgag 44533

                                                                         
Query: 336   gactgccccctccaacacacgcacgaaatgaactgcgattgatcatcgatctcctggcct 395
             |||||||| |||||||||||||| ||||||||||| ||| |||| || ||||||||||||
Sbjct: 44532 gactgccctctccaacacacgcatgaaatgaactgtgatggatcgtcaatctcctggcct 44473

                                                                         
Query: 396   gaaattgggtctgtgacgttgaacttatacgccaagactggcattggaaatgctttgtgg 455
             || ||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 44472 gatattgggtctgtgacactgaatttatatgccaagactggcattggaaatgctttgtgg 44413

                          
Query: 456   tagacgaaaacct 468
             ||||| |||||||
Sbjct: 44412 tagacaaaaacct 44400



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                         
Query: 465   acctcatttgtttctgacccagtagcaatgtacccatcagaaatggaaaggccaacaaaa 524
             ||||||||||| ||||| |||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 43878 acctcatttgtctctgagccagtagcaatgtaaccatcagatatagaaagtccaacaaaa 43819

                 
Query: 525   ttct 528
             ||||
Sbjct: 43818 ttct 43815



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>gb|AY112057.1| Zea mays CL35196_2 mRNA sequence
          Length = 1234

 Score =  113 bits (57), Expect = 7e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                       
Query: 278 tcagtccatttctaacaccttaatgttcccactggagttagcagaaagaagtgtcgaaga 337
           ||||||||||||||| | ||||||||| || |||||||| |||||||| || || |||||
Sbjct: 295 tcagtccatttctaagatcttaatgttgccgctggagtttgcagaaagtagggttgaaga 354

                                                                       
Query: 338 ctgccccctccaacacacgcacgaaatgaactgcgattgatcatcgatctcctggcctga 397
           |||||| |||||||| ||||| ||||||||||| || || ||||| |||||||| |||||
Sbjct: 355 ctgccctctccaacagacgcatgaaatgaactgtgactggtcatcaatctcctgccctga 414

                    
Query: 398 aattgggtc 406
            || |||||
Sbjct: 415 tatagggtc 423



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 466 cctcatttgtttctgacccagtagcaatgtacccatcagaaatggaaaggccaacaaaat 525
           ||||||||||||| || |||||||||||||| |||||||| |||||||||||||| || |
Sbjct: 483 cctcatttgtttcagagccagtagcaatgtaaccatcagatatggaaaggccaacgaagt 542

                 
Query: 526 tctttg 531
           ||||||
Sbjct: 543 tctttg 548



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>ref|NM_148725.2| Arabidopsis thaliana SPA3 (SPA1-RELATED 3); ATP binding / protein
            kinase/ protein serine/threonine kinase/ signal
            transducer AT3G15354 (SPA3) mRNA, complete cds
          Length = 3768

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 432  actggcattggaaatgctttgtggtagacgaaaacctcatttgtttctgacccagtagca 491
            ||||||||||| ||||| |||||||| ||||||||||| || || ||||| || || || 
Sbjct: 2714 actggcattgggaatgccttgtggtacacgaaaacctcgttagtctctgagcctgttgct 2655

                                                   
Query: 492  atgtacccatcagaaatggaaaggccaacaaaattcttt 530
            || ||||||||||| |  || | ||||||||| ||||||
Sbjct: 2654 atatacccatcagagaccgataagccaacaaagttcttt 2616



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>ref|NM_104188.2| Arabidopsis thaliana SPA4 (SPA1-RELATED 4); ATP binding / protein
            kinase/ protein serine/threonine kinase/ signal
            transducer AT1G53090 (SPA4) transcript variant
            AT1G53090.1 mRNA, complete cds
          Length = 2685

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 414  ttgaacttatacgccaagactggcattggaaatgctttgtggtagacgaaaacctc 469
            |||||||| |||| ||| || |||||||||||||| |||||||| || ||||||||
Sbjct: 2342 ttgaacttgtacgacaaaaccggcattggaaatgccttgtggtacacaaaaacctc 2287



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>ref|NM_179471.1| Arabidopsis thaliana SPA4 (SPA1-RELATED 4); ATP binding / protein
            kinase/ protein serine/threonine kinase/ signal
            transducer AT1G53090 (SPA4) transcript variant
            AT1G53090.2 mRNA, complete cds
          Length = 2988

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 414  ttgaacttatacgccaagactggcattggaaatgctttgtggtagacgaaaacctc 469
            |||||||| |||| ||| || |||||||||||||| |||||||| || ||||||||
Sbjct: 2645 ttgaacttgtacgacaaaaccggcattggaaatgccttgtggtacacaaaaacctc 2590



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>gb|AY133883.1| Arabidopsis thaliana clone U10199 putative phytochrome A supressor
            spa1 protein (At1g53090) mRNA, complete cds
          Length = 2416

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 414  ttgaacttatacgccaagactggcattggaaatgctttgtggtagacgaaaacctc 469
            |||||||| |||| ||| || |||||||||||||| |||||||| || ||||||||
Sbjct: 2249 ttgaacttgtacgacaaaaccggcattggaaatgccttgtggtacacaaaaacctc 2194



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>gb|AY040023.1| Arabidopsis thaliana putative phytochrome A supressor spa1 protein
            (At1g53090) mRNA, complete cds
          Length = 2658

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 414  ttgaacttatacgccaagactggcattggaaatgctttgtggtagacgaaaacctc 469
            |||||||| |||| ||| || |||||||||||||| |||||||| || ||||||||
Sbjct: 2342 ttgaacttgtacgacaaaaccggcattggaaatgccttgtggtacacaaaaacctc 2287



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>gb|AC022520.2|AC022520 Arabidopsis thaliana chromosome I BAC F8L10 genomic sequence, complete
             sequence
          Length = 110611

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 414   ttgaacttatacgccaagactggcattggaaatgctttgtggtagacgaaaacct 468
             |||||||| |||| ||| || |||||||||||||| |||||||| || |||||||
Sbjct: 39387 ttgaacttgtacgacaaaaccggcattggaaatgccttgtggtacacaaaaacct 39441



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>ref|NM_202590.1| Arabidopsis thaliana acetylglucosaminyltransferase AT3G15350
            transcript variant AT3G15350.2 mRNA, complete cds
          Length = 2401

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 432  actggcattggaaatgctttgtggtagacgaaaacct 468
            ||||||||||| ||||| |||||||| ||||||||||
Sbjct: 2365 actggcattgggaatgccttgtggtacacgaaaacct 2401



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>ref|NM_112398.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase,
            transferring glycosyl groups AT3G15350 transcript variant
            AT3G15350.1 mRNA, complete cds
          Length = 2333

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 432  actggcattggaaatgctttgtggtagacgaaaacct 468
            ||||||||||| ||||| |||||||| ||||||||||
Sbjct: 2297 actggcattgggaatgccttgtggtacacgaaaacct 2333



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>dbj|AP000413.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K7L4
          Length = 65047

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 432   actggcattggaaatgctttgtggtagacgaaaacct 468
             ||||||||||| ||||| |||||||| ||||||||||
Sbjct: 48975 actggcattgggaatgccttgtggtacacgaaaacct 49011



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>gb|AF538193.1| Euphorbia poissonii NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast gene for chloroplast product
          Length = 1410

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 518  aacaaaattctttgtatttgtatg 541
            ||||||||||||||||||||||||
Sbjct: 1134 aacaaaattctttgtatttgtatg 1157



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>gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds
          Length = 2312

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 450  ttgtggtagacgaaaacctcatttgtttc 478
            ||||||||||| ||||||||||| |||||
Sbjct: 1909 ttgtggtagacaaaaacctcattggtttc 1881



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>gb|AC153729.1| Mus musculus  BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 250801

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 515    gccaacaaaattctttgtatttgt 538
              ||||| ||||||||||||||||||
Sbjct: 127050 gccaataaaattctttgtatttgt 127027



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>gb|BC073044.1| Xenopus laevis MGC82660 protein, mRNA (cDNA clone MGC:82660
           IMAGE:5073354), complete cds
          Length = 1084

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 caaaattctttgtatttgta 539
           ||||||||||||||||||||
Sbjct: 746 caaaattctttgtatttgta 727



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>gb|AC094784.13| Rattus norvegicus 11 BAC CH230-4O6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 228501

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tcccacctctgccttgaagg 174
              ||||||||||||||||||||
Sbjct: 151224 tcccacctctgccttgaagg 151243



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>emb|AL356578.22| Human DNA sequence from clone RP11-14G9 on chromosome Xq22.3-24,
             complete sequence
          Length = 33432

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   caattactcttgcttgattc 587
             ||||||||||||||||||||
Sbjct: 28204 caattactcttgcttgattc 28223



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>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2
              Contains the gene for TED protein (TED),  the 5' end of the
              ED1 gene for ectodermal dysplasia 1, anhidrotic, two novel
              genes and three CpG islands, complete sequence
          Length = 186538

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 519    acaaaattctttgtatttgtatgg 542
              |||||||||||||||||| |||||
Sbjct: 106768 acaaaattctttgtatttctatgg 106745



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>gb|AC018924.9| Homo sapiens chromosome 15 clone RP11-355D13 map 15q15, complete sequence
          Length = 182764

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 541    ggcctgtaaaagtctgaatt 560
              ||||||||||||||||||||
Sbjct: 119906 ggcctgtaaaagtctgaatt 119887



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>gb|AC112221.2| Homo sapiens chromosome 3 clone RP11-11C8, complete sequence
          Length = 151382

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  tcccacctctgccttgaagg 174
            ||||||||||||||||||||
Sbjct: 9901 tcccacctctgccttgaagg 9882



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>gb|AC019011.7| Homo sapiens chromosome 15 clone RP11-78I21 map 15q15, complete
             sequence
          Length = 160456

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   ggcctgtaaaagtctgaatt 560
             ||||||||||||||||||||
Sbjct: 38094 ggcctgtaaaagtctgaatt 38075



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>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 209599

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 515   gccaacaaaattctttgtatttgt 538
             ||||| ||||||||||||||||||
Sbjct: 13272 gccaataaaattctttgtatttgt 13295



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 505      aaatggaaaggccaacaaaa 524
                ||||||||||||||||||||
Sbjct: 23517397 aaatggaaaggccaacaaaa 23517416



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>gb|AC092623.2| Homo sapiens BAC clone RP11-260E12 from 2, complete sequence
          Length = 172344

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 530   tgtatttgtatggcctgtaa 549
             ||||||||||||||||||||
Sbjct: 68556 tgtatttgtatggcctgtaa 68537



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>gb|AF538202.1| Euphorbia meenae NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast gene for chloroplast product
          Length = 1410

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  aacaaaattctttgtatttgtatg 541
            |||||||||||||| |||||||||
Sbjct: 1134 aacaaaattctttggatttgtatg 1157



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>gb|AF538194.1| Euphorbia abdelkuri NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast gene for chloroplast product
          Length = 1410

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  aacaaaattctttgtatttgtatg 541
            |||||||||||||| |||||||||
Sbjct: 1134 aacaaaattctttggatttgtatg 1157



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>dbj|AK068705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160D16, full
            insert sequence
          Length = 1360

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 505  aaatggaaaggccaacaaaa 524
            ||||||||||||||||||||
Sbjct: 1069 aaatggaaaggccaacaaaa 1050



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>gb|AC154464.2| Mus musculus BAC clone RP24-146B1 from 16, complete sequence
          Length = 143858

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    atctaaatatcttcactatt 51
             ||||||||||||||||||||
Sbjct: 61746 atctaaatatcttcactatt 61727



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>emb|BX323877.4| Zebrafish DNA sequence from clone DKEYP-96F6 in linkage group 18,
             complete sequence
          Length = 117654

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   tgtatttgtatggcctgtaa 549
             ||||||||||||||||||||
Sbjct: 38538 tgtatttgtatggcctgtaa 38557



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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 507    atggaaaggccaacaaaattcttt 530
              |||||||||||| |||||||||||
Sbjct: 335701 atggaaaggccatcaaaattcttt 335724



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>emb|AL590415.7| Mouse DNA sequence from clone RP23-97B17 on chromosome 2, complete
              sequence
          Length = 146734

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    gggattataaaatagcaagacatg 196
              ||||| ||||||||||||||||||
Sbjct: 120729 gggatcataaaatagcaagacatg 120706



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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 505   aaatggaaaggccaacaaaa 524
             ||||||||||||||||||||
Sbjct: 54569 aaatggaaaggccaacaaaa 54588


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,394,237
Number of Sequences: 3902068
Number of extensions: 5394237
Number of successful extensions: 93692
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93582
Number of HSP's gapped (non-prelim): 110
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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