>NISP_LACLA (Q07596) Nisin leader peptide-processing serine protease nisP|
           precursor (EC 3.4.21.-)
          Length = 682

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 498 VLAIMFICCSLPCSAAIHGQTEGKQQ 421
           +L  +FI CSL  SA +HG+T   QQ
Sbjct: 4   ILGFLFIVCSLGLSATVHGETTNSQQ 29

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 514  GNSRG-RPGYHVHMLLPAMLSCHPRSNGGKTTGREASSMLRGEQGSRYLSEMLRRPQDPA 338
            G+SRG R G H    + +  S H  S+   TT +E S + RG+ GSR +S   R  +   
Sbjct: 1818 GSSRGGRQGSHYEQSVDS--SGHSGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNEKQSG 1875

Query: 337  AAS 329
              S
Sbjct: 1876 DGS 1878



 Score = 30.8 bits (68), Expect = 3.0
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -3

Query: 514  GNSRG-RPGYHVHMLLPAMLSCHPRSNGGKTTGREASSMLRGEQGSRYLSEMLRRPQDPA 338
            G+SRG R GYH    + +  S H  S+   TT +  S   RG+ GSR  S   R  +   
Sbjct: 3115 GSSRGGRQGYHHEHSVDS--SGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSG 3172

Query: 337  AAS 329
             +S
Sbjct: 3173 DSS 3175



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 514  GNSRG-RPGYHVHMLLPAMLSCHPRSNGGKTTGREASSMLRGEQGSRYLSEMLRRPQDPA 338
            G+SRG R GYH    + +  S H  S+   TT +  S   RG+ GSR  S   R  +   
Sbjct: 2791 GSSRGGRQGYHHEHSVDS--SGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSG 2848

Query: 337  AAS 329
              S
Sbjct: 2849 DGS 2851

>YDJ4_SCHPO (P87052) Hypothetical protein C57A10.04 in chromosome I|
          Length = 338

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +1

Query: 211 SILERIKSTNTNWSAP*KRTLGVLMMRISYINQRRRSVG-----KRLLQGLAVDAASLIS 375
           SIL+ I ST  N+S   K+TL  ++M I   +  R ++G     K L Q        +IS
Sbjct: 45  SILQEIISTEYNYSVDLKKTLNEIIMPIEGQSMEREAIGICTCFKTLNQLHTKLYQQMIS 104

Query: 376 SGIPV 390
           SG PV
Sbjct: 105 SGSPV 109

>ADRB3_MACMU (Q28524) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3|
           adrenoreceptor)
          Length = 418

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -2

Query: 287 IISTPNVLFYGALQLVLVLFIRSKILVVVTRQ-KYLSWYHGKY 162
           ++ + +V FY  L L+++LF+ +++ VV TRQ + L W  G++
Sbjct: 205 VLLSSSVSFY--LPLLVMLFVYARVFVVATRQLRLLRWELGRF 245

>SODC_ACTPL (P24702) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)|
          Length = 190

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 541 GAIFLFILHGNSRGRPGYHVHMLLPAMLSCHPRSNGGK 428
           G +F   LHG ++G  G+H+H       SC P+   GK
Sbjct: 65  GLVFTPHLHGLAQGLHGFHIHQ----NPSCEPKEKDGK 98

>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
          Length = 2158

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -2

Query: 476  AAPCHAQLPSTVKRRENNRERGLLH 402
            AA  H ++PS+ ++RE+ R+RGL H
Sbjct: 1134 AAESHEKVPSSREKRESRRQRGLEH 1158

>CASC5_MOUSE (Q66JQ7) Protein CASC5 (Cancer susceptibility candidate gene 5|
            protein homolog)
          Length = 1612

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 458  QLPSTVKRRE-NNRERGLLHAAGRTGIPLLIRDAASTARPCSSLFPT 321
            Q PST K ++   R+ G+L  AG+  +P L+ + A++     S  PT
Sbjct: 1269 QSPSTQKGQDVARRDEGILAKAGKKALPFLLENVAASTWENESKIPT 1315


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,949,092
Number of Sequences: 219361
Number of extensions: 1580401
Number of successful extensions: 4414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4413
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)