ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal36p20 |
|---|---|
| Clone Library Name | barley_pub |
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 80.9 bits (198), Expect = 1e-15 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 9/86 (10%) Frame = -1 Query: 442 AGTWGERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSA 263 AGTWG+ L VYD NMV QELPGGG L+YQSF AA + + SP+SV +C+ N++SA Sbjct: 309 AGTWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAEDAVATSPKSVFHCFDGENVESA 368 Query: 262 S-------KVDAFLCWED--DAAQEK 212 K+ LCWE+ DA +EK Sbjct: 369 PPPMKKDYKLANLLCWEEEADAMEEK 394
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 68.2 bits (165), Expect = 9e-12 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 8/86 (9%) Frame = -1 Query: 442 AGTWGERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGED---SSGSPRSVLNCYVDGNL 272 AGTW + LN Y NMV QELP GG LIYQSF A ED + GSP+SVL+C+ N+ Sbjct: 309 AGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDAT-EDVPVAVGSPKSVLHCFEAENM 367 Query: 271 QSAS-----KVDAFLCWEDDAAQEKD 209 + + K+ L W +DA +E D Sbjct: 368 VNPAPVKEGKLGNLLPWGEDALEEND 393
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 63.5 bits (153), Expect = 2e-10 Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 6/90 (6%) Frame = -1 Query: 442 AGTWGERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGE--DSSGSPRSVLNCYVDGN-- 275 A TWG++L+ YD N+V QELP GG LIYQSF A E S+GSPRSV +C+ + Sbjct: 302 AATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHCFENVESG 361 Query: 274 --LQSASKVDAFLCWEDDAAQEKDERRGDG 191 L K+ L W A+E+ G G Sbjct: 362 HPLVKEGKLANLLAWR---AEEESLEEGTG 388
>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 357 Score = 38.1 bits (87), Expect = 0.010 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = -1 Query: 421 LNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKVDAFL 242 L + Y + +EL GGS+IY+ F D+ GSPRS+L C Sbjct: 306 LELKEYSLDEKINEELGLGGSIIYKKFLRI--DACGSPRSILKC---------------- 347 Query: 241 CWEDDAAQEK 212 CW++D ++E+ Sbjct: 348 CWKEDESEEE 357
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 33.9 bits (76), Expect = 0.19 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -1 Query: 421 LNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKVDAFL 242 L+V Y + L GGS++Y FT+ G S GSPRS L C Sbjct: 306 LDVKGYACGERSYEALGKGGSIMYCGFTSTG--SCGSPRSTLLC---------------- 347 Query: 241 CWEDDAAQEKDER 203 CW ++ QE +++ Sbjct: 348 CWSENEDQEGEKK 360
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 33.1 bits (74), Expect = 0.32 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = -1 Query: 424 RLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKVDAF 245 +L+V Y + L GGS++Y FT+ G S GSPRS L C Sbjct: 305 KLDVKGYACGERSYEGLNKGGSIMYCGFTSTG--SCGSPRSTLLC--------------- 347 Query: 244 LCWEDDAAQEKDER 203 CW ++ +E +++ Sbjct: 348 -CWSENEDEEGEKK 360
>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 32.7 bits (73), Expect = 0.42 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = -1 Query: 421 LNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKVDAFL 242 ++V Y +EL GS++YQ F E SPRSVL C Sbjct: 306 VHVKGYRVEEKTCEELGMDGSIVYQKFVKTTERCE-SPRSVLKC---------------- 348 Query: 241 CWEDDAAQEKD 209 CW+++ +EK+ Sbjct: 349 CWKEEEKEEKE 359
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 31.6 bits (70), Expect = 0.93 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -1 Query: 382 QELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVD 281 Q L GS++YQ F A + GSPRS L C+ D Sbjct: 317 QGLGMSGSVVYQKFVKASD--CGSPRSTLKCWKD 348
>CAPZA_ARATH (O82631) F-actin capping protein alpha subunit (CapZ-alpha)| Length = 308 Score = 31.6 bits (70), Expect = 0.93 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -1 Query: 409 VYDSTNMVVQELPGG-GSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKV 254 VY+ T+M+ E+P G G +I S++ E+ PR+ VD Q +KV Sbjct: 61 VYNKTHMICLEMPSGAGDVIVSSYSEINENEYLDPRTAQVAIVDHVKQICTKV 113
>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = -1 Query: 421 LNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKVDAFL 242 ++V Y +E GGS++YQ FT GSP+SVL Sbjct: 308 VDVKGYSLAEWSPEEFGKGGSIVYQKFTRT--PFCGSPKSVLKG---------------- 349 Query: 241 CWEDDAAQEKDE 206 CW++D +E+ E Sbjct: 350 CWKEDEEKEEKE 361
>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = -1 Query: 421 LNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDGNLQSASKVDAFL 242 ++V Y +E GGS++YQ FT GSP+SVL Sbjct: 308 VDVKGYSLAEWSPEEFGKGGSIVYQKFTRT--PFCGSPKSVLKG---------------- 349 Query: 241 CWEDDAAQEKDE 206 CW++D +E+ E Sbjct: 350 CWKEDEEKEEKE 361
>IKKA_MOUSE (Q60680) Inhibitor of nuclear factor kappa-B kinase alpha subunit| (EC 2.7.11.10) (I kappa-B kinase alpha) (IkBKA) (IKK-alpha) (IKK-A) (IkappaB kinase) (I-kappa-B kinase 1) (IKK1) (Conserved helix-loop-helix ubiquitous kinase) (Nuclear factor N Length = 745 Score = 30.4 bits (67), Expect = 2.1 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Frame = +2 Query: 224 SIVFPAKESIHLGCTL*IAINVAIQNRSWRPTGVFTGSSEAL------VDERAPARQLLD 385 S + P ES+H ++Q+R R TG+ TGS E L +D R PA Q + Sbjct: 325 SFLLPCDESLH-----------SLQSRIERETGINTGSQELLSETGISLDPRKPASQCVL 373 Query: 386 DHV 394 D V Sbjct: 374 DGV 376
>IKKA_HUMAN (O15111) Inhibitor of nuclear factor kappa-B kinase alpha subunit| (EC 2.7.11.10) (I kappa-B kinase alpha) (IkBKA) (IKK-alpha) (IKK-A) (IkappaB kinase) (I-kappa-B kinase 1) (IKK1) (Conserved helix-loop-helix ubiquitous kinase) (Nuclear factor N Length = 745 Score = 30.0 bits (66), Expect = 2.7 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Frame = +2 Query: 224 SIVFPAKESIHLGCTL*IAINVAIQNRSWRPTGVFTGSSEAL------VDERAPARQLLD 385 S + P ES+H ++Q+R R TG+ TGS E L +D R PA Q + Sbjct: 325 SFLLPPDESLH-----------SLQSRIERETGINTGSQELLSETGISLDPRKPASQCVL 373 Query: 386 DHV 394 D V Sbjct: 374 DGV 376
>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -1 Query: 421 LNVGVYDSTNMVVQELPG-GGSLIYQSFTAAGEDSSGSPRSVLN 293 +NV Y+ + L G GGS++Y F A G S GSPRS L+ Sbjct: 308 VNVKGYNVEETKFEVLGGEGGSMVYYGF-ARGGSSCGSPRSTLH 350
>OXLA_NEUCR (P23623) L-amino-acid oxidase precursor (EC 1.4.3.2) (LAO)| Length = 696 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -1 Query: 427 ERLNVGVYDSTNMVVQELPGGGSLIYQSFTAAGEDSSGSPRSVLNCYVDG 278 E L +Y S + ++PG GS+ Y S+ G D P S+L Y+ G Sbjct: 522 EHLPQPIYGSCS-TTSDIPGIGSICYPSYNINGTD---GPASILASYISG 567
>DGKM_CAEEL (Q10024) Putative diacylglycerol kinase K06A1.6 (EC 2.7.1.107)| (Diglyceride kinase) (DGK) (DAG kinase) Length = 937 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 4 IIQVFPYICSHWQKTLTIFPVLVHNKALEQEQEISNKNK 120 I Q+FP + HW+K L PV+ A ++ NK++ Sbjct: 166 IKQMFPEMADHWRKALAKSPVVRRTAADQETSNPVNKHR 204
>UVRC_CHLAB (Q5L553) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 604 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = -1 Query: 298 LNCYVDGNLQSASKVDAFLCWEDDAAQEKDER 203 + CY + +LQ + V ++ +E+DA KD R Sbjct: 388 IECYDNAHLQGSHAVGVYIVYENDALSPKDYR 419 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,132,971 Number of Sequences: 219361 Number of extensions: 1183885 Number of successful extensions: 3025 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3021 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
