ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36p08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... 98 2e-20
2PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.... 92 8e-19
3PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (... 86 6e-17
4NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... 39 0.014
5PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... 37 0.055
6PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (... 34 0.27
7LACTB_HUMAN (P83111) Serine beta-lactamase-like protein LACTB 31 2.3
8WDR17_HUMAN (Q8IZU2) WD-repeat protein 17 31 2.3
9DPOLA_RAT (O89042) DNA polymerase alpha catalytic subunit (EC 2.... 30 3.9
10V70K_EPMV (P20129) 70 kDa protein 30 5.1
11CBPA_CLOCL (P38058) Cellulose-binding protein A precursor 30 5.1
12DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC ... 29 8.7

>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC|
           3.1.3.2) (PAP)
          Length = 469

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 54/107 (50%), Positives = 63/107 (58%), Gaps = 11/107 (10%)
 Frame = -1

Query: 569 VDVVFAGHVHAYERFTRIYDNK-----------ADARGPVYITIGDGGNREGLASKFIKD 423
           VDVVFAGHVHAYER  R+ +             +D   P+YITIGDGGN EGL +  ++ 
Sbjct: 349 VDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQP 408

Query: 422 HKSAPLSLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVWL 282
                 S FREASFGHG L I N T A + W+RN D  A  AD VWL
Sbjct: 409 QPK--YSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAVAADSVWL 453



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>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)|
           (Manganese(II) purple acid phosphatase)
          Length = 464

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 54/107 (50%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
 Frame = -1

Query: 569 VDVVFAGHVHAYERFTRIYDNKA------------DARGPVYITIGDGGNREGLASKFIK 426
           VDVVFAGHVHAYER  R+  N A            D   PVYITIGDGG  EGLA+   +
Sbjct: 343 VDVVFAGHVHAYERSERV-SNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTE 401

Query: 425 DHKSAPLSLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVW 285
                  S FREASFGH    I N T A + WHRN D  A  AD +W
Sbjct: 402 PQPK--YSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLW 446



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>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)|
           (PAP)
          Length = 432

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 51/106 (48%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
 Frame = -1

Query: 569 VDVVFAGHVHAYERFTRIYDNK-----------ADARGPVYITIGDGGNREGLASKFIKD 423
           VDVVFAGHVHAYER  R+ +              D   PVYITIGD GN   + S  I+ 
Sbjct: 316 VDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQP 375

Query: 422 HKSAPLSLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVW 285
                 S FREASFGHG   I N T A + W+RN D  A  AD VW
Sbjct: 376 QPE--YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 419



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>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
 Frame = -1

Query: 569 VDVVFAGHVHAYERFTRIYDNK----------ADARGPVYITIGDGGNREGLASKFIKDH 420
           VD+ + GHVH YER   +Y ++              G +++  G GG+     +  I   
Sbjct: 248 VDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAI--- 304

Query: 419 KSAPLSLFREASFGHGRLRIVNETTAVWRWHRNDD 315
                S+FR+  +G  +L   N ++ ++ + ++ D
Sbjct: 305 --PKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSD 337



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>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid|
           phosphatase) (APase6)
          Length = 614

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
 Frame = -1

Query: 584 LYEANVDVVFAGHVHAYERF-----------TRIYDNKA----DARGPVYITIGDGGNRE 450
           L +  VD   +GH+H YER              I +N      + +   +I  G  GN E
Sbjct: 487 LLKYGVDAYLSGHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIE 546

Query: 449 GLASKFIKDHKSAPLSLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVWL 282
             +     +  +   +L  +  +G  +L I NET   W   R DD   TV D + L
Sbjct: 547 SHSEFSDGEGLTNITALLDKVHYGFSKLTIFNETALKWELIRGDD--GTVGDSLTL 600



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>PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (APASE)|
          Length = 539

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -1

Query: 584 LYEANVDVVFAGHVHAYERFTRIYDNKADAR-GPVYITIGDGG 459
           LY A  D+V  GH H Y+R+ ++  +KA A  G   + +G GG
Sbjct: 319 LYAAKADLVLVGHDHNYQRYGKMNPDKAAASDGIRQVLVGTGG 361



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>LACTB_HUMAN (P83111) Serine beta-lactamase-like protein LACTB|
          Length = 547

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
 Frame = +3

Query: 330 PPPDGGCLVYNPQSPVSE-----ARLTEQGKRRRLVILDEFGSKAFPVATIADGDVHWTP 494
           PP +     ++PQ+P        AR  E  +     I DE G+    V    DG   W+ 
Sbjct: 82  PPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSE 141

Query: 495 GVGLVVVDPR 524
           G+G   V+ R
Sbjct: 142 GLGYADVENR 151



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>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17|
          Length = 1322

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 207 RVVAPCNSSVQRPA-LGWCLWSSQALQPDLVGHGGELVVVTVPPPDGGCLVY 359
           +V+A  +S+   PA L WC W+++ +    V H G L + T+  PD G +V+
Sbjct: 117 KVIAKLDSTKGIPASLSWC-WNAEDVVA-FVSHRGPLFIWTISGPDSGVIVH 166



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>DPOLA_RAT (O89042) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
           (Fragment)
          Length = 1451

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +3

Query: 207 RVVAPCNSSVQRPAL-----GWCLWSSQALQPDLVGHGGELVVVTVPPP 338
           ++  PC   V+ P L      WC + + AL+PDLV      V+  V PP
Sbjct: 499 KIKGPCWLEVKNPQLLNQPISWCKFEAMALKPDLVN-----VIKDVSPP 542



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>V70K_EPMV (P20129) 70 kDa protein|
          Length = 649

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = -3

Query: 276 LGYSKDTNPAPVVAQMSCRVPPLDPRWLNCNLSELDGSLLSLPNN*KKSPCVPTEEKITH 97
           LG+SK    +   A + C+ PP  P  L          LL LP    K+P  PT   ++ 
Sbjct: 364 LGHSKRVGQS---ADLVCQCPPPPPSML---------PLLLLPRGKVKAPLRPTLASLSF 411

Query: 96  ALNAIYFHMTS 64
             + I +H+TS
Sbjct: 412 GSHPIPYHVTS 422



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>CBPA_CLOCL (P38058) Cellulose-binding protein A precursor|
          Length = 1848

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +3

Query: 267 SSQALQPDLVGH-GGELVVVTVPPPDGGCLVYNPQSPVSEARLTEQGKRRRLVILDEFGS 443
           S+  + P + G+ GG  V+ T P PD    + NP S   +  +T+Q   +  + L+    
Sbjct: 167 STPVVNPKVTGYIGGAKVLGTAPGPDVPSSIINPTSATFDKNVTKQADVKTTMTLN---G 223

Query: 444 KAFPVATIADG 476
             F   T A+G
Sbjct: 224 NTFKTITDANG 234



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>DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1465

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = +3

Query: 207 RVVAPCNSSVQRPAL-----GWCLWSSQALQPDLVGHGGELVVVTVPPP 338
           ++  PC   V+ P L      WC +   AL+PDLV      V+  V PP
Sbjct: 496 KIKGPCWLEVKNPQLLNQPISWCKFEVMALKPDLVN-----VIKDVSPP 539


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,870,666
Number of Sequences: 219361
Number of extensions: 1786279
Number of successful extensions: 5490
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5482
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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