>ILVC_PYRAB (Q9UZ09) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 332

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 28/114 (24%), Positives = 50/114 (43%)
 Frame = +2

Query: 167 INIPQILQKEGSREHMPNSSRVSTSREFQHPAALTDKQLVGLRPENYFSLQRHAHIQSTE 346
           I IP ++Q +  REH+    R   +  F H   +  KQ+V   P  Y  +   A     +
Sbjct: 82  ILIPDLVQPKVYREHIEPYLREGQALGFSHGFNIHYKQIV---PPEYVDVIMVAPKSPGK 138

Query: 347 FIGALLLLRRREMCSVGH*KEVQIPSLIGALSNGSGNNRDISV*ITSAISCTIA 508
            +      R + +   G      +P+L+    + +GN +D+++ +  AI CT A
Sbjct: 139 RV------REKYLEGFG------VPALVAVYQDYTGNAKDLALAMAKAIGCTRA 180

>AMIF_BACCR (P59701) Formamidase (EC 3.5.1.49) (Formamide amidohydrolase)|
          Length = 332

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 3   WSTAMEICTXTNPQSDYLQILFLESCKQKKI 95
           W+T   +CT   P++D    LF E+CK+ K+
Sbjct: 71  WTTEEFLCTVPGPETD----LFAEACKESKV 97

>VGNM_CPMV (P03599) Genome polyprotein M (RNA2 polyprotein) [Contains:|
           Movement protein (MP); Large coat protein (LCP) (Coat
           protein VP37); Small coat protein, N-terminus part (SCP)
           (Coat protein VP23); Small coat protein, C-terminus
           part]
          Length = 1046

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
 Frame = -2

Query: 375 LLSRSSAPMNSVDCI*ACRCSEK*FSGRK-PTSCLSVRAAGC*NSRDVETLDEFGICSLL 199
           L +RS+AP+N+V    +CRC       RK    C S     C +S D   +     C  L
Sbjct: 13  LWTRSAAPLNNVYLSYSCRCG---LGKRKLAGGCCSAPYITCYDSADFRRVQYLYFC--L 67

Query: 198 PSFCRIWGMLI---DW**VSFCKHISYAFYEGFKR 103
             +C ++  L+   DW    F K  S  F   F R
Sbjct: 68  TRYCCLYFFLLLLADW----FYKKSSIFFETEFSR 98

>PAPOG_HUMAN (Q9BWT3) Poly(A) polymerase gamma (EC 2.7.7.19) (PAP gamma)|
           (Polynucleotide adenylyltransferase gamma) (SRP RNA 3'
           adenylating enzyme)
          Length = 736

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
 Frame = +2

Query: 149 ETYHQSINIPQILQKEGSREHMPNSSRVSTSREFQHPAALTDKQLVG-------LRPENY 307
           + YH    I     ++ S  ++  S+R     EF+   A+TD+ L G       L P N+
Sbjct: 307 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 366

Query: 308 FSLQRH 325
           F   RH
Sbjct: 367 FQKYRH 372

>DYM_HUMAN (Q7RTS9) Dymeclin (Dyggve-Melchior-Clausen syndrome protein)|
          Length = 669

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 189 KRKAAESICQIRPEFQHPASFNIPPPSLTSNLLVCALKTISHCNDTLIYNQRS 347
           K    ESI +  P +    SF+ P P+ +S L +    TIS C   +  N R+
Sbjct: 19  KLSGTESISENDPFWNQLLSFSFPAPTSSSELKLLEEATISVCRSLVENNPRT 71

>YP141_YEAST (Q03002) Putative serine/threonine-protein kinase YPL141C (EC|
           2.7.11.1)
          Length = 865

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 141 YRKRPITNQSTFPKSYKRKAAESICQIRPEFQHPASFNIPP 263
           Y K    N     K++ R ++ S  + RP   HP S+  PP
Sbjct: 515 YNKNKTQNSLQSAKNFYRTSSSSHTKPRPTSYHPGSYTTPP 555

>PLSB_CAEEL (Q22949) Probable glycerol-3-phosphate acyltransferase,|
           mitochondrial precursor (EC 2.3.1.15) (GPAT)
          Length = 718

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 144 CKHISYAFYEGFKRL*EFSFVCKIPGRVSEDSQTVGLXLYKFP 16
           CK  SY  Y+ F+RL +   VCK    V  +++  G+ +   P
Sbjct: 123 CKCCSYVLYKVFRRLMDKLLVCKEEMEVLYEAEQTGIPMVYLP 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,325,566
Number of Sequences: 219361
Number of extensions: 1565088
Number of successful extensions: 3854
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3851
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)