ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37e10 |
|---|---|
| Clone Library Name | barley_pub |
>ALGC_PSEPK (Q88C93) Phosphomannomutase/phosphoglucomutase (EC 5.4.2.8) (EC| 5.4.2.2) (PMM / PGM) Length = 463 Score = 42.4 bits (98), Expect = 0.001 Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 2/152 (1%) Frame = -1 Query: 662 RLNSTGEESHLAMETSGHGALKENHW-LDDGAYMMVKLLNKLAGARTLNPNIGSKVLTDL 486 ++ TG S LA E SGH +KE + DDG Y +LL L+ N+ + D+ Sbjct: 314 KMKQTG--SLLAGEMSGHIFIKERWYGFDDGIYSAARLLEILSKTEQSAENLFAAFPNDI 371 Query: 485 AEGLEEAAVTVEIRLKI-DQNHADLKGGSFRDYGESILKHLESVISKDPNLHKAPKNHEG 309 + VT E + I D D D+GE+ L ++ G Sbjct: 372 STPEINIDVTDEGKFSIIDALQRDA------DWGEANLTTID-----------------G 408 Query: 308 VRVSGYGGWFLLRLSLHDPVLPLNIEAQSKGD 213 VRV GW L+R S PVL L EA S + Sbjct: 409 VRVDYANGWGLVRASNTTPVLVLRFEADSDAE 440
>KCNH8_MOUSE (P59111) Potassium voltage-gated channel subfamily H member 8| (Voltage-gated potassium channel subunit Kv12.1) (Ether-a-go-go-like potassium channel 3) (ELK channel 3) (ELK3) (Fragment) Length = 876 Score = 38.5 bits (88), Expect = 0.021 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 2/92 (2%) Frame = +2 Query: 5 EAILKQHFFVCTVALYPKQLNTDEQDVMQRLQDRSIFLPFTAAKTCSMQLCPMLKIHSKQ 184 + I K + V T+ QL D + +MQ L++ I P ++ CS+ PM + Sbjct: 639 QQINKLNSEVTTLTQEVSQLGRDMRSIMQLLEN--ILSPQQPSQFCSLHPTPMCP---SR 693 Query: 185 QALQVRA*W--HHPCFVPQC*GEEPDHGGIAS 274 ++LQ R W H PC Q G HG +AS Sbjct: 694 ESLQTRVSWSAHQPCLHLQAGGAHLYHGNVAS 725
>ALS2_PANTR (Q5BIW4) Alsin (Amyotrophic lateral sclerosis protein 2 homolog)| Length = 1657 Score = 35.8 bits (81), Expect = 0.14 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Frame = +1 Query: 37 YCCPVSKTAQHRRTRRHAKATGSIDFPTLHCCKNVF-NAVVSNAENSLEAASTASPSLMA 213 +CCP+ T + HA S TL + VF N +V+N ++ + S + + Sbjct: 255 HCCPLGVTLTESQAENHASTALSPSTETLDRQEEVFENTLVANDQSVATELNAVSAQITS 314 Query: 214 SPLLCASMLRGRTGSWRDSLNRNQPPYPET 303 S + S + G+ S RN P YP+T Sbjct: 315 SDAM--SSQQNVMGTTEISSARNIPSYPDT 342
>ALS2_HUMAN (Q96Q42) Alsin (Amyotrophic lateral sclerosis protein 2)| Length = 1657 Score = 35.8 bits (81), Expect = 0.14 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Frame = +1 Query: 37 YCCPVSKTAQHRRTRRHAKATGSIDFPTLHCCKNVF-NAVVSNAENSLEAASTASPSLMA 213 +CCP+ T + HA S TL + VF N +V+N ++ + S + + Sbjct: 255 HCCPLGVTLTESQAENHASTALSPSTETLDRQEEVFENTLVANDQSVATELNAVSAQITS 314 Query: 214 SPLLCASMLRGRTGSWRDSLNRNQPPYPET 303 S + S + G+ S RN P YP+T Sbjct: 315 SDAM--SSQQNVMGTTEISSARNIPSYPDT 342
>ALGC_PSESM (Q88BD4) Phosphomannomutase/phosphoglucomutase (EC 5.4.2.8) (EC| 5.4.2.2) (PMM / PGM) Length = 465 Score = 35.4 bits (80), Expect = 0.18 Identities = 45/142 (31%), Positives = 58/142 (40%), Gaps = 2/142 (1%) Frame = -1 Query: 632 LAMETSGHGALKENHW-LDDGAYMMVKLLNKLAGARTLNPNIGSKVLTDLAEGLEEAAVT 456 LA E SGH KE + DDG Y +LL L+ N DL E T Sbjct: 324 LAGEMSGHIFFKERWFGFDDGIYSAARLLEILS-QEPANAE-------DLFETFPNDIST 375 Query: 455 VEIRLKIDQNHADLKGGSFRDYGESILKHLESVISKDPNLHKAPKNH-EGVRVSGYGGWF 279 EI +K+ SI++ LE KD A +GVRV GW Sbjct: 376 PEINIKVTDVTKF-----------SIIEALE----KDAQWGDAKLTTIDGVRVDYPKGWG 420 Query: 278 LLRLSLHDPVLPLNIEAQSKGD 213 L+R S PVL L EA+++ + Sbjct: 421 LVRASNTTPVLVLRFEAETQAE 442
>GCS1_HUMAN (Q13724) Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106)| (Processing A-glucosidase I) Length = 837 Score = 33.5 bits (75), Expect = 0.68 Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 21/136 (15%) Frame = -1 Query: 512 IGSKVLTDLAEGLEEA---------AVTVEIRLKIDQNHADLKGGSFRDYGESILKHLES 360 +G++VLT LAE L EA A ++E +D+ H + G F D+G H ++ Sbjct: 606 LGARVLTRLAEHLGEAEVAAELGPLAASLEAAESLDELHWAPELGVFADFG----NHTKA 661 Query: 359 VISKDPN-------LHKAPKNHEGVRVSGYGGWFLLRLSLHDPVLP-----LNIEAQSKG 216 V K + + + V GY F L L L DP L+I A S+ Sbjct: 662 VQLKPRPPQGLVRVVGRPQPQLQYVDALGYVSLFPLLLRLLDPTSSRLGPLLDILADSRH 721 Query: 215 DAIKLGLAVLAASSEF 168 GL LAASS F Sbjct: 722 LWSPFGLRSLAASSSF 737
>PYRB_PSEPU (Q59711) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 334 Score = 32.7 bits (73), Expect = 1.2 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Frame = -1 Query: 545 KLAGARTLNP----NIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHADLKGGSFRDYGE 384 ++ G +TL P G KV TDLAEGL++ V + +RL+ ++ + GG GE Sbjct: 202 RVIGPKTLIPIGIEQYGVKVYTDLAEGLKDVDVVIMLRLQRER----MAGGLLPSEGE 255
>PYRB_PSEPK (Q88D30) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 334 Score = 32.7 bits (73), Expect = 1.2 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Frame = -1 Query: 545 KLAGARTLNP----NIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHADLKGGSFRDYGE 384 ++ G +TL P G KV TDLAEGL++ V + +RL+ ++ + GG GE Sbjct: 202 RVIGPKTLIPIGIEQYGVKVYTDLAEGLKDVDVVIMLRLQRER----MAGGLLPSEGE 255
>ALS2_MOUSE (Q920R0) Alsin (Amyotrophic lateral sclerosis protein 2 homolog)| Length = 1651 Score = 32.7 bits (73), Expect = 1.2 Identities = 24/89 (26%), Positives = 36/89 (40%) Frame = +1 Query: 37 YCCPVSKTAQHRRTRRHAKATGSIDFPTLHCCKNVFNAVVSNAENSLEAASTASPSLMAS 216 +CCP+ T + +HA S L VF V AE ++ ++ T S S + Sbjct: 255 HCCPLGVTLSESQAEKHASPAPSPHPEALDEQGEVFENTVVEAELNMGSSQTTSGSAI-- 312 Query: 217 PLLCASMLRGRTGSWRDSLNRNQPPYPET 303 S + G+ S R P YP+T Sbjct: 313 -----STQQNIVGTAEVSSARTAPSYPDT 336
>UL36_HCMVA (P16767) Hypothetical protein UL36| Length = 476 Score = 32.3 bits (72), Expect = 1.5 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 9/113 (7%) Frame = +3 Query: 342 WVFADHTLQMFQD*FSIVTEGPSFQICMILINLQPYLHCHSSLLKALGQ---------IS 494 W ++ + FS+V G S Q ++I P + C+ LL ALG + Sbjct: 193 WTHNTEVMKFKETSFSVVRAGGSIQTMELMIRTVPRITCYHQLLGALGHEVPERKEFLVR 252 Query: 495 QNFTTDVWVQCSGTSKFIQKFNHHICSIIEPVILF*CSMATCFHRQM*FLASR 653 Q D + G + + + E V++F C M HR F R Sbjct: 253 QYVLVDTFGVVYGYDPAMDA----VYRLAEDVVMFTCVMGKKGHRNHRFSGRR 301
>Y1100_METJA (Q58500) Hypothetical protein MJ1100| Length = 448 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = -1 Query: 374 KHLESVISKDPNLHKA-PKNHEGVRVSGYGGWFLLRLSLHDPVLPLNIEAQSKGDAIKL 201 K + VI +L K P+ +G R + GW L+R S +P + + +EA++ DA +L Sbjct: 375 KVMSYVIENGESLFKTVPETVDGARFNLENGWVLIRPSGTEPYIRVRVEAKNNKDAKEL 433
>EXOC_AZOBR (P45632) Phosphomannomutase (EC 5.4.2.8) (PMM)| Length = 469 Score = 32.0 bits (71), Expect = 2.0 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 6/146 (4%) Frame = -1 Query: 638 SHLAMETSGHGALKENHW-LDDGAYMMVKLLNKLAGARTLNPNIGSKVLTDLAEGLEEAA 462 S LA E SGH + + DD Y V+L+ ++ ++ L++L + L + Sbjct: 318 SPLAGEMSGHIFFADKWYGFDDALYCAVRLIGLVSKL--------NQPLSELRDRLPDVV 369 Query: 461 VTVEIRLKIDQNHA-----DLKGGSFRDYGESILKHLESVISKDPNLHKAPKNHEGVRVS 297 T E R ++ + +++G S R E D N + +GVRV Sbjct: 370 NTPETRFQVSEERKFQVVQEVEGRSSRLMAEGA----------DVN------DIDGVRVK 413 Query: 296 GYGGWFLLRLSLHDPVLPLNIEAQSK 219 GW+LLR S VL E+ ++ Sbjct: 414 DADGWWLLRASNTQDVLVARAESGTR 439
>SYI_BLOPB (Q493S3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 942 Score = 31.6 bits (70), Expect = 2.6 Identities = 24/86 (27%), Positives = 37/86 (43%) Frame = +3 Query: 339 IWVFADHTLQMFQD*FSIVTEGPSFQICMILINLQPYLHCHSSLLKALGQISQNFTTDVW 518 IW TL Q ++ P + +I IN Y+ ++L+ + Q Q F+ + Sbjct: 239 IWTTTPWTLPSNQ----AISVHPDYSYQLIAINNSKYIIIAANLVNTVMQRIQCFSWRIL 294 Query: 519 VQCSGTSKFIQKFNHHICSIIEPVIL 596 + SG S KF H S PV+L Sbjct: 295 GETSGNSLESLKFRHPFMSFDVPVVL 320
>EFG_CHLAB (Q5L6S5) Elongation factor G (EF-G)| Length = 694 Score = 31.6 bits (70), Expect = 2.6 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ + +PV+ + IE +SKGD KL A+ A S E Sbjct: 403 LERIEIPEPVIDMAIEPKSKGDREKLAQALSALSEE 438
>PEX5_CANGA (Q6FM42) Peroxisomal targeting signal receptor (Peroxin-5) (PTS1| receptor) Length = 590 Score = 31.2 bits (69), Expect = 3.4 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 14/91 (15%) Frame = -1 Query: 521 NPN---IGSKVLTDLAEGLEEAAVTVEIRLKIDQNHAD--LKGGSFRDYGESIL---KHL 366 NPN IG +L + L EAA+ E +K D H D LK G + E L L Sbjct: 285 NPNAYQIGC-ILMENGAKLSEAALAFEAAIKQDPKHVDAWLKLGIVQIQNEKELNGMSAL 343 Query: 365 ESVISKDPNLHKAPKN------HEGVRVSGY 291 E+ + DPN +A KN +EG +S Y Sbjct: 344 ETCLKLDPNNLEAMKNLAISYINEGYDMSAY 374
>EFG_CHLPN (Q9Z802) Elongation factor G (EF-G)| Length = 694 Score = 31.2 bits (69), Expect = 3.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ DPV+ + IE +SKGD KL A+ + S E Sbjct: 403 LERIEFPDPVIDMAIEPKSKGDREKLAQALSSLSEE 438
>EFG_CHLCV (Q824G0) Elongation factor G (EF-G)| Length = 694 Score = 31.2 bits (69), Expect = 3.4 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ + +PV+ + IE +SKGD KL A+ A S E Sbjct: 403 LERIEIPEPVIDMAIEPKSKGDREKLAQALNALSEE 438
>ADO_HUMAN (Q06278) Aldehyde oxidase (EC 1.2.3.1)| Length = 1338 Score = 30.8 bits (68), Expect = 4.4 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 35/120 (29%) Frame = -1 Query: 596 ENHWLDDGAYMM-----VKLLNKLAGARTLNPNI---GSKVLT----DLAEGLEEAAVTV 453 EN+W G M+ V L ++ AG +I GS ++T ++ +G+ + V Sbjct: 999 ENYWKKKGLAMVPLKFPVGLASRAAGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQV 1058 Query: 452 ---EIRLKIDQNH--------------------ADLKGGSFRDYGESILKHLESVISKDP 342 E+R+ + H ADL G + +D +++LK LE +ISK+P Sbjct: 1059 VSRELRMPMSNVHLRGTSTETVPNANISGGSVVADLNGLAVKDACQTLLKRLEPIISKNP 1118
>PGM_NEIGO (P40390) Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase)| (PGM) Length = 460 Score = 30.8 bits (68), Expect = 4.4 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 1/139 (0%) Frame = -1 Query: 632 LAMETSGHGALKENHW-LDDGAYMMVKLLNKLAGARTLNPNIGSKVLTDLAEGLEEAAVT 456 +A E SGH KE + DDG Y AGAR L S +++ + L ++ T Sbjct: 319 VAGEMSGHVFFKERWFGFDDGLY---------AGARLLEILSASDNPSEVLDNLPQSIST 369 Query: 455 VEIRLKIDQNHADLKGGSFRDYGESILKHLESVISKDPNLHKAPKNHEGVRVSGYGGWFL 276 E+ + + + G +++ L + + +G+RV G+ L Sbjct: 370 PELNISLPEG----------SNGHQVIEELAAKAEFEGATEII--TIDGLRVEFPDGFGL 417 Query: 275 LRLSLHDPVLPLNIEAQSK 219 +R S P+L L EA ++ Sbjct: 418 MRASNTTPILVLRFEADTQ 436
>ACKA_DEIRA (Q9RR92) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 398 Score = 30.8 bits (68), Expect = 4.4 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -1 Query: 524 LNPNIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHADLKGGSFRDYGESILKHLESV 357 LNP G L+ LAE L A V++ Q L+GGS+ +L+ LE++ Sbjct: 18 LNPASGEVRLSGLAERLGTPAAAVKLEHSGQQESRSLEGGSYDAALGEVLRELETL 73
>TOP1_BUCAI (P57371) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 861 Score = 30.8 bits (68), Expect = 4.4 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 12/108 (11%) Frame = +3 Query: 75 NKTSCKGYRIDR--FSYPSLLQKRVQC-SCVQC*K---------FTRSSKHCKSELNGIT 218 N SC GY+ ++ F P L K +QC C K FT +K CK+ T Sbjct: 681 NNPSCSGYKFEKGVFKSPIYLSKTIQCEKCYNNMKLKIGPFGKFFTCINKICKN-----T 735 Query: 219 LALCLNVKGKNRIMEG*PQQEPATISRNSDAFMILRGFVKIWVFADHT 362 + N + + +E P P + + SDA+ +LR + FA +T Sbjct: 736 RKILPNGEISDPKLE--PIPFPELLCKQSDAWFVLREGISGIFFAANT 781
>TRPB2_AQUAE (O67409) Tryptophan synthase beta chain 2 (EC 4.2.1.20)| Length = 434 Score = 30.4 bits (67), Expect = 5.8 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 686 KNVIDEAIRLNSTGEESHLAMETSGHG 606 K IDEA++ TGEE + SGHG Sbjct: 391 KAAIDEALKCKETGEEKVILFNLSGHG 417
>SYM_SULAC (Q4J8M3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 571 Score = 30.4 bits (67), Expect = 5.8 Identities = 29/144 (20%), Positives = 63/144 (43%), Gaps = 3/144 (2%) Frame = -1 Query: 590 HWLDDGAYMMVKLLNKLAGARTLNPNIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHADLK 411 HW D + K+ + ++ + T+ N+ S L+ + EGL ++T + I A + Sbjct: 187 HWFFDLSEFGDKIRDWISSSSTMPDNVKSVALSWVKEGLRPRSITRDNMWGIPAPFAGAE 246 Query: 410 GGSFRDYGESILKHLESVISKDPNLHKAPKNHEGVRVSGYGGWFLL---RLSLHDPVLPL 240 + + E++L +L + + NL K E + ++ + + H +LP Sbjct: 247 NKTIYVWFEALLGYLSATVEYFKNLGKEEMWKEFWLYNDTKTYYFIGKDNIPFHAVILPA 306 Query: 239 NIEAQSKGDAIKLGLAVLAASSEF 168 + A ++ K L + A++E+ Sbjct: 307 MLMASNE----KYNLPSVIAATEY 326
>XERD_CHLTR (O84872) Tyrosine recombinase xerD| Length = 300 Score = 30.4 bits (67), Expect = 5.8 Identities = 10/16 (62%), Positives = 15/16 (93%) Frame = -3 Query: 144 EHVFAAVKGRKIDRSC 97 EHVF +++G+K+DRSC Sbjct: 210 EHVFLSIRGKKLDRSC 225
>EFG_NITWN (Q3SSW9) Elongation factor G (EF-G)| Length = 690 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L ++ DPV+ + IE +SK D KLG+A+ ++E Sbjct: 397 LEKMEFPDPVIEIAIEPKSKADQEKLGIALAKLAAE 432
>EFG_RHIME (Q92QH2) Elongation factor G (EF-G)| Length = 699 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ +PV+ + IE ++KGD K+GLA+ ++E Sbjct: 403 LERMEFPEPVIQIAIEPKTKGDQEKMGLALNRLAAE 438
>EFG_AGRTU (P70782) Elongation factor G (EF-G)| Length = 699 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ +PV+ + IE ++KGD K+GLA+ ++E Sbjct: 403 LERMEFPEPVIQIAIEPKTKGDQEKMGLALNRRAAE 438
>EFG_AGRT5 (Q8UE15) Elongation factor G (EF-G)| Length = 699 Score = 30.4 bits (67), Expect = 5.8 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ +PV+ + IE ++KGD K+GLA+ ++E Sbjct: 403 LERMEFPEPVIQIAIEPKTKGDQEKMGLALNRLAAE 438
>PYRB_PSESM (Q87V99) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 334 Score = 30.4 bits (67), Expect = 5.8 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -1 Query: 545 KLAGARTLNP----NIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHADLKGGSFRDYGE 384 ++ G +TL P G KV TDL EGL++ V + +RL+ ++ + GG GE Sbjct: 202 RVIGPKTLLPVGVEQYGVKVYTDLNEGLKDVDVVIMLRLQRER----MTGGLLPSEGE 255
>EFG_CHLTR (O84444) Elongation factor G (EF-G)| Length = 694 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ +PV+ + IE +SKGD KL A+ A S E Sbjct: 403 LERIEAPEPVIDMAIEPKSKGDREKLAQALSALSEE 438
>EFG_CHLTA (Q3KLR3) Elongation factor G (EF-G)| Length = 694 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ +PV+ + IE +SKGD KL A+ A S E Sbjct: 403 LERIEAPEPVIDMAIEPKSKGDREKLAQALSALSEE 438
>EFG_CHLMU (Q9PJV6) Elongation factor G (EF-G)| Length = 694 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ +PV+ + IE +SKGD KL A+ A S E Sbjct: 403 LERIEAPEPVIDMAIEPKSKGDREKLAQALSALSEE 438
>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)| Length = 509 Score = 24.3 bits (51), Expect(2) = 9.4 Identities = 21/61 (34%), Positives = 28/61 (45%) Frame = +2 Query: 242 GEEPDHGGIASTGTSHHIQKL*RLHDSSGLCEDLGLC*SHSPNVSRLILHSHGRTLLSNL 421 G +GG +ST + H+ LHDSS S SP +S L+ S LS+L Sbjct: 94 GSSTVNGGGSSTSGTEHLHSHHSLHDSSSSV-------SISPAISSLMPISS----LSHL 142 Query: 422 H 424 H Sbjct: 143 H 143 Score = 23.9 bits (50), Expect(2) = 9.4 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +1 Query: 151 VVSNAENSLEAASTASPSLMASPLLCASMLRG 246 VVS A N LEA S S L L+ A G Sbjct: 40 VVSGALNGLEAMSAESTGLCLQDLVSAGTANG 71
>SYM_SULTO (Q971C1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 571 Score = 29.6 bits (65), Expect = 9.8 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -1 Query: 599 KENHWLDDGAYMMVKLLNKLAGARTLNPNIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHA 420 K HW D + K+ + ++TL N+ S L+ + EGL+ ++T + I Sbjct: 184 KTKHWFFDLSAFNDKIEEWIKNSQTLPENVKSVALSWVKEGLKPRSITRDNAWGIPAPFE 243 Query: 419 DLKGGSFRDYGESILKHLESVI 354 +G + + E++L ++ + I Sbjct: 244 GAEGKTIYVWFEALLGYISATI 265
>ADO_RAT (Q9Z0U5) Aldehyde oxidase (EC 1.2.3.1)| Length = 1333 Score = 29.6 bits (65), Expect = 9.8 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -1 Query: 422 ADLKGGSFRDYGESILKHLESVISKDP 342 ADL G + +D +++LK LE +ISK+P Sbjct: 1087 ADLNGLAVKDACQTLLKRLEPIISKNP 1113
>ADO_MOUSE (O54754) Aldehyde oxidase (EC 1.2.3.1) (Retinal oxidase)| Length = 1333 Score = 29.6 bits (65), Expect = 9.8 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -1 Query: 422 ADLKGGSFRDYGESILKHLESVISKDP 342 ADL G + +D +++LK LE +ISK+P Sbjct: 1087 ADLNGLAVKDACQTLLKRLEPIISKNP 1113
>XYLT_CAEEL (Q965Q8) Xylosyltransferase sqv-6 (EC 2.4.2.26) (Peptide| O-xylosyltransferase) (Squashed vulva protein 6) Length = 806 Score = 29.6 bits (65), Expect = 9.8 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = -1 Query: 557 KLLNKLAGARTLNPNIGSKVLTDLAEGLEEAAVTVEIRLKIDQNHADLKGGSF 399 K ++ +G +T NP ++ DLA+ A+T + K+ LK G+F Sbjct: 40 KHISSDSGEKTSNPLPSCEITDDLAKSAISRAITPSCKAKLQLEACQLKNGTF 92
>EFG_RHILO (Q98N59) Elongation factor G (EF-G)| Length = 696 Score = 29.6 bits (65), Expect = 9.8 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -1 Query: 278 LLRLSLHDPVLPLNIEAQSKGDAIKLGLAVLAASSE 171 L R+ DPV+ + IE ++K D K+GLA+ ++E Sbjct: 403 LERMEFPDPVIQIAIEPKTKNDQEKMGLALHRLAAE 438
>SYM_PYRAB (Q9V011) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 722 Score = 29.6 bits (65), Expect = 9.8 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 8/65 (12%) Frame = -1 Query: 578 DGAYMMVKL------LNKLAGARTLNPNIGSKVLTDLAEGLEEAAVTVEIR--LKIDQNH 423 D A+ +K+ L + + PN+ + VL+ + EGLEE A+T ++ + + + Sbjct: 184 DSAHYYIKMQDFAERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDE 243 Query: 422 ADLKG 408 D+KG Sbjct: 244 EDMKG 248
>ACTHR_BOVIN (P34974) Adrenocorticotropic hormone receptor (ACTH receptor)| (ACTH-R) (Melanocortin receptor 2) (MC2-R) (Adrenocorticotropin receptor) Length = 297 Score = 29.6 bits (65), Expect = 9.8 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = +3 Query: 507 TDVWVQCSGTSKFIQKFNHHICSIIEPVILF*CSMA--TCFHRQM*FLASRIQT 662 T +W C+G+ I F+HH+ ++I LF +A C + M FL +R T Sbjct: 152 TVLWAGCTGSGITIVTFSHHVPTVIAFTALFPLMLAFILCLYVHM-FLLARSHT 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,745,631 Number of Sequences: 219361 Number of extensions: 2148224 Number of successful extensions: 6167 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 5991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6165 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7422931207 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
