Clone Information

BLAST Search Result

Clone Name	rbaal37e08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ARFP_ARATH (Q93YR9) Auxin response factor 16	126	4e-29
2	ARFJ_ARATH (Q9SKN5) Auxin response factor 10	116	5e-26
3	ARFA_ARATH (Q8L7G0) Auxin response factor 1	51	2e-06
4	ARFK_ARATH (Q9ZPY6) Auxin response factor 11	49	1e-05
5	ARFR_ARATH (Q9C5W9) Auxin response factor 18	49	1e-05
6	IAA34_ARATH (Q9C5X0) Auxin-responsive protein IAA34 (Indoleaceti...	47	3e-05
7	IAA20_ORYSA (Q5VRR0) Auxin-responsive protein IAA20 (Indoleaceti...	46	6e-05
8	IAA31_ARATH (Q8H174) Auxin-responsive protein IAA31 (Indoleaceti...	45	2e-04
9	ARFD_ARATH (Q9ZTX9) Auxin response factor 4	43	5e-04
10	IAA32_ARATH (Q8RYC6) Auxin-responsive protein IAA32 (Indoleaceti...	43	5e-04
11	ARFI_ARATH (Q9XED8) Auxin response factor 9	42	9e-04
12	IAA20_ARATH (O24410) Auxin-responsive protein IAA20 (Indoleaceti...	42	0.001
13	IAA9_ORYSA (Q6K846) Auxin-responsive protein IAA9 (Indoleacetic ...	42	0.001
14	ARFE_ARATH (P93024) Auxin response factor 5 (Transcription facto...	41	0.003
15	IAA28_ARATH (Q9XFM0) Auxin-responsive protein IAA28 (Indoleaceti...	39	0.007
16	IAA8_ORYSA (Q6Z5M0) Auxin-responsive protein IAA8 (Indoleacetic ...	39	0.010
17	ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive p...	39	0.010
18	ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protei...	39	0.013
19	IAA30_ARATH (Q9M1R4) Putative auxin-responsive protein IAA30 (Pu...	38	0.022
20	IAA26_ORYSA (Q652A1) Auxin-responsive protein IAA26 (Indoleaceti...	38	0.022
21	IAA12_ARATH (Q38830) Auxin-responsive protein IAA12 (Indoleaceti...	37	0.028
22	IAA14_ORYSA (Q7Y1H8) Auxin-responsive protein IAA14 (Indoleaceti...	37	0.037
23	IAA12_ORYSA (Q75GK1) Auxin-responsive protein IAA12 (Indoleaceti...	37	0.048
24	IAA13_ARATH (Q38831) Auxin-responsive protein IAA13 (Indoleaceti...	36	0.063
25	IAA2_ORYSA (Q9LG86) Auxin-responsive protein IAA2 (Indoleacetic ...	36	0.063
26	IAA4_PEA (P49679) Auxin-induced protein IAA4	35	0.18
27	IAA4_ORYSA (Q59AF4) Auxin-responsive protein IAA4 (Indoleacetic ...	35	0.18
28	ARFH_ARATH (Q9FGV1) Auxin response factor 8	34	0.24
29	IAA31_ORYSA (P0C133) Auxin-responsive protein IAA31 (Indoleaceti...	34	0.24
30	ARFF_ARATH (Q9ZTX8) Auxin response factor 6	34	0.31
31	ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hyp...	34	0.31
32	IAA4_ARATH (P33077) Auxin-responsive protein IAA4 (Indoleacetic ...	34	0.31
33	IAA25_ORYSA (P0C128) Auxin-responsive protein IAA25 (Indoleaceti...	33	0.41
34	IAA11_ARATH (Q38829) Auxin-responsive protein IAA11 (Indoleaceti...	33	0.41
35	IAA10_ORYSA (Q59AA1) Auxin-responsive protein IAA10 (Indoleaceti...	33	0.41
36	IAA26_ARATH (Q8LAL2) Auxin-responsive protein IAA26 (Indoleaceti...	33	0.53
37	IAA2_ARATH (P49678) Auxin-responsive protein IAA2 (Indoleacetic ...	33	0.69
38	AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic ...	33	0.69
39	IAA6_ARATH (Q38824) Auxin-responsive protein IAA6 (Indoleacetic ...	32	0.90
40	IAA7_ORYSA (Q6H543) Auxin-responsive protein IAA7 (Indoleacetic ...	32	0.90
41	IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleaceti...	32	0.90
42	AX22C_PHAAU (O24541) Auxin-induced protein 22C (Indole-3-acetic ...	32	0.90
43	IAA16_ORYSA (P0C127) Auxin-responsive protein IAA16 (Indoleaceti...	32	0.90
44	IAA1_ARATH (P49677) Auxin-responsive protein IAA1 (Indoleacetic ...	32	1.2
45	IAA3_ORYSA (Q5NB25) Auxin-responsive protein IAA3 (Indoleacetic ...	32	1.2
46	AUX22_SOYBN (P13088) Auxin-induced protein AUX22	32	1.2
47	DYIN_DICDI (P54703) Dynein intermediate chain, cytosolic (DH IC)...	32	1.5
48	IAA6_ORYSA (Q8LQ74) Auxin-responsive protein IAA6 (Indoleacetic ...	32	1.5
49	IAA17_ARATH (P93830) Auxin-responsive protein IAA17 (Indoleaceti...	31	2.0
50	IAA13_ORYSA (Q7Y1Y5) Auxin-responsive protein IAA13 (Indoleaceti...	31	2.0
51	GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein	31	2.0
52	IAA6_PEA (P49680) Auxin-induced protein IAA6	31	2.6
53	IAA3_ARATH (Q38822) Auxin-responsive protein IAA3 (Indoleacetic ...	31	2.6
54	AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic ...	31	2.6
55	DHA_BACSH (P17556) Alanine dehydrogenase (EC 1.4.1.1)	30	3.4
56	AX22A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic ...	30	3.4
57	IAA8_ARATH (Q38826) Auxin-responsive protein IAA8 (Indoleacetic ...	30	3.4
58	AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic ...	30	3.4
59	IAA15_ORYSA (Q6AT10) Auxin-responsive protein IAA15 (Indoleaceti...	30	3.4
60	CEP2_MOUSE (Q60952) Centrosomal protein 2 (Intranuclear matrix p...	30	4.5
61	IAA33_ARATH (Q9FKM7) Putative auxin-responsive protein IAA33 (Pu...	30	4.5
62	IAA1_ORYSA (Q5VRD1) Auxin-responsive protein IAA1 (Indoleacetic ...	30	5.9
63	POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)	29	7.7
64	XPO7_MOUSE (Q9EPK7) Exportin-7 (Exp7) (Ran-binding protein 16)	29	7.7
65	POLG_BSTV1 (Q65730) Genome polyprotein [Contains: P1 proteinase ...	29	10.0
66	IAA22_ORYSA (Q69TU6) Auxin-responsive protein IAA22 (Indoleaceti...	29	10.0
67	TEN3_TENMO (Q27270) Tenecin-3 precursor	29	10.0
68	SYR_RHOBA (Q7URC7) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini...	29	10.0
69	XPO7_HUMAN (Q9UIA9) Exportin-7 (Exp7) (Ran-binding protein 16)	29	10.0

>ARFP_ARATH (Q93YR9) Auxin response factor 16|
          Length = 670

 Score =  126 bits (317), Expect = 4e-29
 Identities = 57/87 (65%), Positives = 76/87 (87%)
 Frame = -2

Query: 549 DIGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYRDAAGALKHT 370
           + GHCK+FM+S+DVGRTLDL+ +GSYEEL R+LSDMFG++K+E++S V YRDA+GA+K+ 
Sbjct: 583 ETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSSVLYRDASGAIKYA 642

Query: 369 GDEPFSDFTKTARRLTILTDTSGDSSV 289
           G+EPFS+F KTARRLTILT+   +S V
Sbjct: 643 GNEPFSEFLKTARRLTILTEQGSESVV 669

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>ARFJ_ARATH (Q9SKN5) Auxin response factor 10|
          Length = 693

 Score =  116 bits (290), Expect = 5e-26
 Identities = 52/86 (60%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = -2

Query: 549 DIGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGM-EKAELMSHVFYRDAAGALKH 373
           + GHCK+FM+SEDVGRTLDL+ +GSY+ELYR+L++MF + E+++L++HV YRDA G +K 
Sbjct: 579 ETGHCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLTHVVYRDANGVIKR 638

Query: 372 TGDEPFSDFTKTARRLTILTDTSGDS 295
            GDEPFSDF K  +RLTI  D  GD+
Sbjct: 639 IGDEPFSDFMKATKRLTIKMDIGGDN 664

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>ARFA_ARATH (Q8L7G0) Auxin response factor 1|
          Length = 665

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMS-----HVFYRDAAGALKHT 370
           K+ MQ   VGR +DLT    YE+L+++L +MF + K EL+       V Y D    +   
Sbjct: 546 KVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDI-KGELLESTKKWQVVYTDDEDDMMMV 604

Query: 369 GDEPFSDFTKTARRLTILT 313
           GD+P+++F    R++ I T
Sbjct: 605 GDDPWNEFCGMVRKIFIYT 623

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>ARFK_ARATH (Q9ZPY6) Auxin response factor 11|
          Length = 601

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH----VFYRDAAGALKHTG 367
           K+ MQ   VGR +DLT + SY+EL + L  MF +E  EL       + + D  G     G
Sbjct: 494 KVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE-GELSPKDKWAIVFTDDEGDRMLVG 552

Query: 366 DEPFSDFTKTARRLTI 319
           D+P+++F K A++L I
Sbjct: 553 DDPWNEFCKMAKKLFI 568

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>ARFR_ARATH (Q9C5W9) Auxin response factor 18|
          Length = 602

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH----VFYRDAAGALKHTG 367
           K+ MQ   VGR +DLT + SY+EL   L +MF ++  +L++     V + D  G +   G
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ-GQLLARDKWIVVFTDDEGDMMLAG 551

Query: 366 DEPFSDFTKTARRLTI 319
           D+P+++F K A+++ I
Sbjct: 552 DDPWNEFCKMAKKIFI 567

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>IAA34_ARATH (Q9C5X0) Auxin-responsive protein IAA34 (Indoleacetic acid-induced|
           protein 34)
          Length = 185

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
 Frame = -2

Query: 543 GHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGME--------KAELMSHVFYRDAA 388
           G+ K+ M    VGR + +   GSY  L  +L DMFGM+        + E    + YRD  
Sbjct: 93  GYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEE 152

Query: 387 GALKHTGDEPFSDFTKTARRLTI 319
           G  ++ GD P+++F ++  RL I
Sbjct: 153 GLWRNAGDVPWNEFIESVERLRI 175

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>IAA20_ORYSA (Q5VRR0) Auxin-responsive protein IAA20 (Indoleacetic acid-induced|
           protein 20)
          Length = 183

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -2

Query: 543 GHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAE-----LMSH---VFYRDAA 388
           G+ K+ M+   +GR LDL+ +GSY EL   L  MF     E        H   V Y D  
Sbjct: 99  GYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGE 158

Query: 387 GALKHTGDEPFSDFTKTARRLTIL 316
           G     GD P+  F K+ +RL IL
Sbjct: 159 GDWMQVGDVPWEAFAKSVKRLKIL 182

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>IAA31_ARATH (Q8H174) Auxin-responsive protein IAA31 (Indoleacetic acid-induced|
           protein 31)
          Length = 158

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGME----KAELMSHVF-YRDAAGALKHT 370
           K++M+   +GR LDL     YE L   LS MF         +   HV  Y D  G     
Sbjct: 76  KVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMMV 135

Query: 369 GDEPFSDFTKTARRLTI 319
           GD P+  F +T RRL I
Sbjct: 136 GDIPWDMFLETVRRLKI 152

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>ARFD_ARATH (Q9ZTX9) Auxin response factor 4|
          Length = 788

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGME----KAELMSHVFYRDAAGALKHTG 367
           K+  Q   VGR +DL+ +  Y++L   L  +F ME      E    + Y D+   +   G
Sbjct: 669 KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVG 728

Query: 366 DEPFSDFTKTARRLTILT 313
           D+P+ DF     ++ + T
Sbjct: 729 DDPWHDFCNVVWKIHLYT 746

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>IAA32_ARATH (Q8RYC6) Auxin-responsive protein IAA32 (Indoleacetic acid-induced|
           protein 32)
          Length = 191

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGME--------KAELMSHVFYRDAAG 385
           + K+ +    VGR + L   G+Y  L  +L+DMFGM+        + E    + YRD  G
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREG 159

Query: 384 ALKHTGDEPFSDFTKTARRLTI 319
             ++ GD P+ +F ++  R+ I
Sbjct: 160 IWRNVGDVPWKEFVESVDRMRI 181

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>ARFI_ARATH (Q9XED8) Auxin response factor 9|
          Length = 638

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMS----HVFYRDAAGALKHTG 367
           K+ MQ   VGR +DL A+  Y EL   +  +F + K EL S     + + D  G +   G
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDI-KGELRSRNQWEIVFTDDEGDMMLVG 585

Query: 366 DEPFSDFTKTARRLTI 319
           D+P+ +F    +R+ I
Sbjct: 586 DDPWPEFCNMVKRIFI 601

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>IAA20_ARATH (O24410) Auxin-responsive protein IAA20 (Indoleacetic acid-induced|
           protein 20)
          Length = 175

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGM--------EKAELMSHVF-YRDAA 388
           + K+ M+   +GR +DL ++  Y +L R L  MF          +     SHV  Y D  
Sbjct: 86  YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKE 145

Query: 387 GALKHTGDEPFSDFTKTARRLTI 319
           G     GD P+  F  T RRL I
Sbjct: 146 GDWMMVGDVPWEMFLSTVRRLKI 168

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>IAA9_ORYSA (Q6K846) Auxin-responsive protein IAA9 (Indoleacetic acid-induced|
           protein 9)
          Length = 182

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF------GMEKAELMSH-------VFY 400
           + K+  + + +GR +DL    SY+EL   L+ MF      G +K     H       V Y
Sbjct: 94  YVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTY 153

Query: 399 RDAAGALKHTGDEPFSDFTKTARRLTIL 316
            D  G     GD P+ DF ++ +RL IL
Sbjct: 154 EDGDGDWMLVGDVPWDDFARSVKRLKIL 181

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>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)|
            (Auxin-responsive protein IAA24)
          Length = 902

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
 Frame = -2

Query: 510  VGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH-------VFYRDAAGALKHTGDEPFS 352
            VGR++D+T+   YEEL   +  MFG+E   L++H       + Y D    +   GD+P+ 
Sbjct: 804  VGRSIDVTSFKDYEELKSAIECMFGLE--GLLTHPQSSGWKLVYVDYESDVLLVGDDPWE 861

Query: 351  DFTKTARRLTILTDT 307
            +F    R + IL+ T
Sbjct: 862  EFVGCVRCIRILSPT 876

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>IAA28_ARATH (Q9XFM0) Auxin-responsive protein IAA28 (Indoleacetic acid-induced|
           protein 28)
          Length = 175

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVF---YRDAAGALKHT 370
           + KI M+   +GR ++L+A  +Y++L   +  +F  + +  ++  +   Y D  G     
Sbjct: 82  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLV 141

Query: 369 GDEPFSDFTKTARRLTIL 316
           GD P+  F  T +RL +L
Sbjct: 142 GDVPWEMFVSTVKRLHVL 159

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>IAA8_ORYSA (Q6Z5M0) Auxin-responsive protein IAA8 (Indoleacetic acid-induced|
           protein 8)
          Length = 205

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 16/88 (18%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF----------------GMEKAELMSHVF 403
           K++M+   +GR LDL  +  Y+ L  RL+ MF                GM+  ++   + 
Sbjct: 107 KVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHHVLT 166

Query: 402 YRDAAGALKHTGDEPFSDFTKTARRLTI 319
           Y D  G     GD P+  F  + +RL I
Sbjct: 167 YEDQEGDWMMAGDVPWELFLTSVKRLRI 194

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>ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive protein IAA22)|
          Length = 1086

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
 Frame = -2

Query: 510  VGRTLDLTAVGSYEELYRRLSDMFGME---KAELMS--HVFYRDAAGALKHTGDEPFSDF 346
            VGR++D+T    Y+EL   L+ MFG+E   +  L S   + Y D    +   GD+P+ +F
Sbjct: 969  VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEF 1028

Query: 345  TKTARRLTILT 313
                + + IL+
Sbjct: 1029 VNCVQNIKILS 1039

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>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)|
          Length = 859

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH-----VFYRDAAGALKHT 370
           K+  Q   +GR++DL+   +YEEL   L  +F     ELM+      + Y D    +   
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEF-NGELMAPKKDWLIVYTDEENDMMLV 795

Query: 369 GDEPFSDFTKTARRLTILT 313
           GD+P+ +F    R++ I T
Sbjct: 796 GDDPWQEFCCMVRKIFIYT 814

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>IAA30_ARATH (Q9M1R4) Putative auxin-responsive protein IAA30 (Putative|
           indoleacetic acid-induced protein 30)
          Length = 172

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGM--------EKAELMSHVF-YRDAA 388
           + K+ M+   +GR +DL ++  Y +L   L  MF          +     SHV  Y D  
Sbjct: 84  YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKE 143

Query: 387 GALKHTGDEPFSDFTKTARRLTI 319
           G     GD P+  F  + RRL I
Sbjct: 144 GDWMMVGDVPWEMFLSSVRRLKI 166

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>IAA26_ORYSA (Q652A1) Auxin-responsive protein IAA26 (Indoleacetic acid-induced|
           protein 26)
          Length = 140

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMS-------HVFYRDAAGALK 376
           K+ M      R +D+ A G Y EL   L+DMF      LM         V Y D  G   
Sbjct: 49  KVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGDWM 108

Query: 375 HTGDEPFSDFTKTARRLTIL 316
             GD P+  F  + +R+ ++
Sbjct: 109 LVGDVPWEMFVSSCKRMRVM 128

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>IAA12_ARATH (Q38830) Auxin-responsive protein IAA12 (Indoleacetic acid-induced|
           protein 12) (BODENLOS protein)
          Length = 239

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
 Frame = -2

Query: 546 IGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDM-FGMEKAELMSHV------------ 406
           +G  K+ M    +GR +D+ A  SYE L + L +M FGM        V            
Sbjct: 124 LGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDF 183

Query: 405 --FYRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSVA 286
              Y D  G     GD P+  F  + +RL I+  TS  S +A
Sbjct: 184 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRIM-GTSEASGLA 224

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>IAA14_ORYSA (Q7Y1H8) Auxin-responsive protein IAA14 (Indoleacetic acid-induced|
           protein 14)
          Length = 195

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH-----VFYRDAAGALK 376
           + K+ M      R +DL   G Y EL   L  +FG   A+  +      V Y D  G L 
Sbjct: 110 YVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASASAAHFAVAYEDKDGDLM 169

Query: 375 HTGDEPFSDFTKTARRLTIL 316
             GD P+  F  + ++L I+
Sbjct: 170 LAGDVPWDMFISSCKKLRIM 189

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>IAA12_ORYSA (Q75GK1) Auxin-responsive protein IAA12 (Indoleacetic acid-induced|
           protein 12)
          Length = 226

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF--------GMEKAELMSHVFYRDAAGAL 379
           K+ M      R +DL     Y EL   L  MF        G   +E    + Y+D  G L
Sbjct: 132 KVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFA--ITYQDKDGDL 189

Query: 378 KHTGDEPFSDFTKTARRLTIL 316
              GD PF  FT T ++L I+
Sbjct: 190 MLVGDVPFDMFTSTCKKLRIM 210

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>IAA13_ARATH (Q38831) Auxin-responsive protein IAA13 (Indoleacetic acid-induced|
           protein 13)
          Length = 247

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
 Frame = -2

Query: 546 IGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMS--------------- 412
           +G  K+ M    +GR +DL A  SYE L + L DMF       +                
Sbjct: 129 VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGS 188

Query: 411 ---HVFYRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSVA 286
               + Y D  G     GD P+  F  + +RL ++  +  +   A
Sbjct: 189 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAA 233

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>IAA2_ORYSA (Q9LG86) Auxin-responsive protein IAA2 (Indoleacetic acid-induced|
           protein 2)
          Length = 238

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF-GMEKAELMS------------------ 412
           KI M    +GR +DL A G Y +L   +  +F G+  A+  +                  
Sbjct: 122 KINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGE 181

Query: 411 -HVFYRDAAGALKHTGDEPFSDFTKTARRLTIL--TDTSGDSSVAS*GVRKEASS 256
             + Y D  G     GD P+  F  TA+RL +L  +D    S + + G RK A++
Sbjct: 182 YTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSLMRAAGSRKRAAA 236

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>IAA4_PEA (P49679) Auxin-induced protein IAA4|
          Length = 189

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYR---------DAAGA 382
           K+ M      R +DL   G Y EL + L  MF +   E      Y+         D  G 
Sbjct: 96  KVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGD 155

Query: 381 LKHTGDEPFSDFTKTARRLTILTDT 307
               GD P+  F  + +RL I+  T
Sbjct: 156 WMLVGDVPWDMFVTSCKRLRIMKGT 180

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>IAA4_ORYSA (Q59AF4) Auxin-responsive protein IAA4 (Indoleacetic acid-induced|
           protein 4)
          Length = 203

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF--GMEKAELM-----------SHVF-YR 397
           K++M+   +GR LDL  +  Y+ L  +L  MF   +  A++M           +HV  Y 
Sbjct: 112 KVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPITYADVMECHQQVPGQKAAHVLTYE 171

Query: 396 DAAGALKHTGDEPFSDFTKTARRLTI 319
           D  G     GD P+  F  + ++L I
Sbjct: 172 DQDGDWMMVGDVPWELFLSSVKKLRI 197

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>ARFH_ARATH (Q9FGV1) Auxin response factor 8|
          Length = 811

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = -2

Query: 522 QSEDVGRTLDLTAVGSYEELYRRLSDMFGME---KAELMS--HVFYRDAAGALKHTGDEP 358
           +S  VGR+LD++   SY EL   L  MF +E   +  L S   + + D    +   GD+P
Sbjct: 712 KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDP 771

Query: 357 FSDFTKTARRLTILT 313
           +  F      + IL+
Sbjct: 772 WESFVNNVWYIKILS 786

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>IAA31_ORYSA (P0C133) Auxin-responsive protein IAA31 (Indoleacetic acid-induced|
           protein 31)
          Length = 197

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF----GMEKAELMSH-----VFYRDAAGA 382
           K+ M      R +DL     Y EL   L  MF    G   A+   +     V Y D  G 
Sbjct: 103 KVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAVNPSDFAVTYEDKDGD 162

Query: 381 LKHTGDEPFSDFTKTARRLTIL 316
           L   GD PF  F  T +RL I+
Sbjct: 163 LMLVGDVPFEMFISTCKRLRIM 184

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>ARFF_ARATH (Q9ZTX8) Auxin response factor 6|
          Length = 933

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
 Frame = -2

Query: 522  QSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHV------FYRDAAGALKHTGDE 361
            +S   GR+LD++   SY EL   L+ MFG+E  +L   V       + D    +   GD+
Sbjct: 801  KSGSFGRSLDISKFSSYHELRSELARMFGLE-GQLEDPVRSGWQLVFVDRENDVLLLGDD 859

Query: 360  PFSDFTKTARRLTILT 313
            P+ +F  +   + IL+
Sbjct: 860  PWPEFVSSVWCIKILS 875

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>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)|
            (Protein BIPOSTO) (Auxin-responsive protein
            IAA21/IAA23/IAA25)
          Length = 1164

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = -2

Query: 510  VGRTLDLTAVGSYEELYRRLSDMFGMEKAELMS------HVFYRDAAGALKHTGDEPFSD 349
            VGR++D+     Y+EL   L+ MFG+E  +L         + Y D    +   GD+P+ +
Sbjct: 1048 VGRSIDVNRYRGYDELRHDLARMFGIE-GQLEDPQTSDWKLVYVDHENDILLVGDDPWEE 1106

Query: 348  FTKTARRLTILT 313
            F    + + IL+
Sbjct: 1107 FVNCVQSIKILS 1118

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>IAA4_ARATH (P33077) Auxin-responsive protein IAA4 (Indoleacetic acid-induced|
           protein 4) (Auxin-induced protein AUX2-11)
          Length = 186

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYR---------DAA 388
           + K+ M      R +DLT    Y EL + L +MF     E      Y+         D  
Sbjct: 90  YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKD 149

Query: 387 GALKHTGDEPFSDFTKTARRLTIL 316
           G     GD P+  F  + +RL I+
Sbjct: 150 GDWMLVGDVPWEMFVSSCKRLRIM 173

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>IAA25_ORYSA (P0C128) Auxin-responsive protein IAA25 (Indoleacetic acid-induced|
           protein 25)
          Length = 246

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 17/92 (18%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF----------------GMEKAELMSHVF 403
           K+ ++   VGR +DL A  SY+ L + L  MF                 ME+     +V 
Sbjct: 147 KVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVL 206

Query: 402 -YRDAAGALKHTGDEPFSDFTKTARRLTILTD 310
            Y D  G     GD P+  F  + +RL I  D
Sbjct: 207 VYEDNEGDRMLVGDVPWELFIASVKRLYIAQD 238

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>IAA11_ARATH (Q38829) Auxin-responsive protein IAA11 (Indoleacetic acid-induced|
           protein 11)
          Length = 246

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 21/94 (22%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF-----GMEKAELMSH------------- 409
           K+ M    +GR +DL A   YE L   L +MF     G    E   H             
Sbjct: 140 KVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSS 199

Query: 408 ---VFYRDAAGALKHTGDEPFSDFTKTARRLTIL 316
              + Y D  G     GD P+  F  + RRL I+
Sbjct: 200 GLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIM 233

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>IAA10_ORYSA (Q59AA1) Auxin-responsive protein IAA10 (Indoleacetic acid-induced|
           protein 10)
          Length = 281

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 18/99 (18%)
 Frame = -2

Query: 543 GHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMS---------------- 412
           G  K+ M  E +GR +DL A  SY+ L   L  MF      L +                
Sbjct: 164 GWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEY 223

Query: 411 HVFYRDAAGALKHTGDEPFSDFTKTARRLTIL--TDTSG 301
            + Y D  G     GD P+  F  + +RL I+  +D +G
Sbjct: 224 QLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANG 262

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>IAA26_ARATH (Q8LAL2) Auxin-responsive protein IAA26 (Indoleacetic acid-induced|
           protein 26) (Phytochrome-associated protein 1)
          Length = 269

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 21/103 (20%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEEL--------------YRRLSDMFGMEKAEL------- 418
           KI M    +GR +DL A  SYE+L               R +SD  G EK  +       
Sbjct: 155 KINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKG 214

Query: 417 MSHVFYRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSV 289
              + Y D  G     GD P+  F  + +RL ++  +   S++
Sbjct: 215 EFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSAL 257

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>IAA2_ARATH (P49678) Auxin-responsive protein IAA2 (Indoleacetic acid-induced|
           protein 2)
          Length = 174

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
 Frame = -2

Query: 546 IGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYR---------D 394
           + + K+ M      R +DL    +Y EL + L +MF +   E      Y+         D
Sbjct: 77  VSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYED 136

Query: 393 AAGALKHTGDEPFSDFTKTARRLTIL 316
             G     GD P+  F+ + +RL I+
Sbjct: 137 KDGDWMLVGDVPWDMFSSSCKRLRIM 162

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>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced|
           protein ARG4)
          Length = 196

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYR---------DAAGA 382
           K+ M      R +DL   G Y EL + L  MF +   E      Y+         D  G 
Sbjct: 103 KVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGD 162

Query: 381 LKHTGDEPFSDFTKTARRLTIL 316
               GD P+  F  + +RL I+
Sbjct: 163 WMLVGDVPWDMFVTSCKRLRIM 184

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>IAA6_ARATH (Q38824) Auxin-responsive protein IAA6 (Indoleacetic acid-induced|
           protein 6)
          Length = 189

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
 Frame = -2

Query: 546 IGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGM---------EKAELMSHVFYRD 394
           IG+ K+ M      R +DL +  SY  L   L ++FG          +K E +  + Y D
Sbjct: 93  IGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYI--IIYED 150

Query: 393 AAGALKHTGDEPFSDFTKTARRLTIL--TDTSG 301
                   GD P+  F ++ +RL I+  +D +G
Sbjct: 151 KDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183

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>IAA7_ORYSA (Q6H543) Auxin-responsive protein IAA7 (Indoleacetic acid-induced|
           protein 7)
          Length = 300

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 26/118 (22%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF--------------------------GM 433
           KI M    +GR +DL A  SYE+L   +  +F                          G+
Sbjct: 181 KINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGL 240

Query: 432 EKAELMSHVFYRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSVAS*GVRKEAS 259
                   + Y D  G     GD P+  F  + +RL +L  +   SS+ + G ++ A+
Sbjct: 241 LDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLITSGRKRTAA 298

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>IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleacetic acid-induced|
           protein 19) (MASSUGU2 protein)
          Length = 197

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
 Frame = -2

Query: 546 IGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFG-------MEKAELMSHV-FYRDA 391
           +G+ K+ M      R +DL +   Y++L   L  +FG       ++  +   +V  Y D 
Sbjct: 96  LGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDK 155

Query: 390 AGALKHTGDEPFSDFTKTARRLTIL--TDTSG 301
            G     GD P+  F ++ +RL I+  +D +G
Sbjct: 156 DGDWMLAGDVPWGMFLESCKRLRIMKRSDATG 187

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>AX22C_PHAAU (O24541) Auxin-induced protein 22C (Indole-3-acetic acid-induced|
           protein ARG12)
          Length = 188

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFG-------MEKAELMSHV-FYRDAAG 385
           + K+ M      R +DL     Y +L   L   FG       ++ AE   HV  Y D  G
Sbjct: 81  YVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGICEALKDAENAEHVPIYEDKDG 140

Query: 384 ALKHTGDEPFSDFTKTARRLTIL 316
                GD P+  F ++ +RL I+
Sbjct: 141 DWMLVGDVPWEMFRESCKRLRIM 163

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>IAA16_ORYSA (P0C127) Auxin-responsive protein IAA16 (Indoleacetic acid-induced|
           protein 16)
          Length = 228

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 34/127 (26%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF--------------------------GM 433
           K+ M    +GR +DL A G Y EL   +  +F                          G 
Sbjct: 101 KVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGE 160

Query: 432 EKA--ELMSH------VFYRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSVAS*G 277
           E+A   L+        + Y D  G     GD P++ F   ARRL +L  +  ++S    G
Sbjct: 161 EEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNASTIRAG 220

Query: 276 VRKEASS 256
            RK A++
Sbjct: 221 SRKRAAA 227

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>IAA1_ARATH (P49677) Auxin-responsive protein IAA1 (Indoleacetic acid-induced|
           protein 1)
          Length = 168

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
 Frame = -2

Query: 549 DIGHCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYR--------- 397
           ++ + K+ M      R +DL    +Y EL + L +MF     E      Y+         
Sbjct: 73  NVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYE 132

Query: 396 DAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSV 289
           D  G     GD P+  F+ + ++L I+  +   +++
Sbjct: 133 DKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEAPTAL 168

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>IAA3_ORYSA (Q5NB25) Auxin-responsive protein IAA3 (Indoleacetic acid-induced|
           protein 3)
          Length = 263

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF-----GMEKAELMSH----VFYRDAA 388
           + K+ M      R +DL    +Y+++   L  MF     G E AE        + Y D  
Sbjct: 160 YVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKD 219

Query: 387 GALKHTGDEPFSDFTKTARRLTIL 316
           G     GD P+  FT + RRL I+
Sbjct: 220 GDWMLVGDVPWEMFTDSCRRLRIM 243

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>AUX22_SOYBN (P13088) Auxin-induced protein AUX22|
          Length = 195

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFG-------MEKAELMSHV-FYRDAAG 385
           + K+ M      R +DL     Y +L   L  +FG       ++ A+   HV  Y D  G
Sbjct: 88  YVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDG 147

Query: 384 ALKHTGDEPFSDFTKTARRLTIL 316
                GD P+  F ++ +RL I+
Sbjct: 148 DWMLVGDVPWEMFMESCKRLRIM 170

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>DYIN_DICDI (P54703) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic|
           dynein intermediate chain)
          Length = 652

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 76  GTSLIIGEKLKLPAPVVLLDLHPGRGGSPF 165
           G  +++ E+ K   P+  +DLHP +GG+ F
Sbjct: 478 GNRIVMNERYKELGPITSVDLHPSKGGADF 507

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>IAA6_ORYSA (Q8LQ74) Auxin-responsive protein IAA6 (Indoleacetic acid-induced|
           protein 6)
          Length = 335

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 26/99 (26%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF--------GMEKAELMSH---------- 409
           KI M    +GR +DL A  SY+ L   +  +F            A++             
Sbjct: 221 KINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQL 280

Query: 408 --------VFYRDAAGALKHTGDEPFSDFTKTARRLTIL 316
                   + Y D+ G     GD P+  F  TA+RL +L
Sbjct: 281 LDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVL 319

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>IAA17_ARATH (P93830) Auxin-responsive protein IAA17 (Indoleacetic acid-induced|
           protein 17) (Auxin response 3)
          Length = 229

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 23/96 (23%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFG----------------MEKAELMSHV- 406
           K+ M      R +DL    SY+EL   LS+MF                 M + +LM  V 
Sbjct: 114 KVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVN 173

Query: 405 ------FYRDAAGALKHTGDEPFSDFTKTARRLTIL 316
                  Y D  G     GD P+  F  T +RL ++
Sbjct: 174 SWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLM 209

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>IAA13_ORYSA (Q7Y1Y5) Auxin-responsive protein IAA13 (Indoleacetic acid-induced|
           protein 13)
          Length = 236

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKA--ELMSHV-------FYRDAAGA 382
           K+ M      R +DL    SY++L   L  MFG   A    M+ V        Y D  G 
Sbjct: 135 KVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYEDKDGD 194

Query: 381 LKHTGDEPFSDFTKTARRLTIL 316
               GD P+  F ++ +RL I+
Sbjct: 195 WMLVGDVPWQMFVESCKRLRIM 216

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>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein|
          Length = 442

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
 Frame = -3

Query: 245 VRATAGRGAAPHGGG-------SQRA*IEWRQTPNGEPPRPGCKSRSTTGAGSFSFSPI- 90
           +    G+GA P GGG       S R     R  P G   R  C+    TG        + 
Sbjct: 159 IEVVVGQGAKPGGGGMLLGQKISDRV-ANMRNLPKGIDQRSACRHPDWTGPDDLEIKILE 217

Query: 89  IREVPEWDG*LFV 51
           +RE+ +W+  ++V
Sbjct: 218 LREITDWEKPIYV 230

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>IAA6_PEA (P49680) Auxin-induced protein IAA6|
          Length = 179

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF-------GMEKAELMSHV-FYRDAAG 385
           + K+ M      R +DL     Y EL   L  +F        ++ AE   HV  Y D  G
Sbjct: 77  YMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDCCGIEEALKDAENCEHVPIYEDKDG 136

Query: 384 ALKHTGDEPFSDFTKTARRLTIL 316
                GD P+  F ++ +RL I+
Sbjct: 137 DWMLVGDVPWEMFIESCKRLRIM 159

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>IAA3_ARATH (Q38822) Auxin-responsive protein IAA3 (Indoleacetic acid-induced|
           protein 3) (Short hypocotyl) (Suppressor of HY2)
          Length = 189

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH---------VFYRDAA 388
           + K+ M      R +DL+    Y EL + L  MF     E               Y D  
Sbjct: 94  YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKD 153

Query: 387 GALKHTGDEPFSDFTKTARRLTIL 316
           G     GD P+  F  T +RL I+
Sbjct: 154 GDWMLIGDVPWEMFICTCKRLRIM 177

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>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced|
           protein ARG13)
          Length = 193

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSH---------VFYRDAA 388
           + K+ M      R +DL    SY EL + L +MF     E               Y D  
Sbjct: 99  YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKD 158

Query: 387 GALKHTGDEPFSDFTKTARRLTIL 316
           G     GD P++ F  + +RL I+
Sbjct: 159 GDWMLVGDVPWNMFVSSCKRLRIM 182

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>DHA_BACSH (P17556) Alanine dehydrogenase (EC 1.4.1.1)|
          Length = 372

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 510 VGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYRDAAGALKHT 370
           VG   D+T +    E  R+L DMFG +   LMS+ +  + A ++KH+
Sbjct: 188 VGMGADVTVIDLSPERLRQLEDMFGRDVQTLMSNPY--NIAESVKHS 232

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>AX22A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic acid-induced|
           protein ARG3)
          Length = 194

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFG-------MEKAELMSHV-FYRDAAG 385
           + K+ M      R +DL     Y +L   L  +FG       ++  E   HV  Y D  G
Sbjct: 87  YVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCYGMVEALKNVENGEHVPIYEDKDG 146

Query: 384 ALKHTGDEPFSDFTKTARRLTIL 316
                GD P+  F ++ +RL I+
Sbjct: 147 DWMLVGDVPWEMFMESCKRLRIM 169

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>IAA8_ARATH (Q38826) Auxin-responsive protein IAA8 (Indoleacetic acid-induced|
           protein 8)
          Length = 321

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 24/97 (24%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMF-----------GMEKAELMSHV------ 406
           K+ M      R +DL    SY++L   L  MF           G +  E MS +      
Sbjct: 203 KVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLL 262

Query: 405 -------FYRDAAGALKHTGDEPFSDFTKTARRLTIL 316
                   Y D  G     GD P+  FT+T ++L I+
Sbjct: 263 HGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIM 299

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>AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic acid-induced|
           protein ARG14)
          Length = 203

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
 Frame = -2

Query: 540 HCKIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHV---------FYRDAA 388
           + K+ M      R +DL    SY EL + L ++F     E               Y D  
Sbjct: 109 YLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKD 168

Query: 387 GALKHTGDEPFSDFTKTARRLTIL 316
           G     GD P++ F  + +RL I+
Sbjct: 169 GDWMLVGDVPWNMFVSSCKRLRII 192

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>IAA15_ORYSA (Q6AT10) Auxin-responsive protein IAA15 (Indoleacetic acid-induced|
           protein 15)
          Length = 212

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
 Frame = -2

Query: 504 RTLDLTAVGSYEELYRRLSDMF---------GMEKAELMSHVF-------YRDAAGALKH 373
           R +DL A   Y++L   L D F         G E+ +L+  V        Y D  G    
Sbjct: 121 RKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWML 180

Query: 372 TGDEPFSDFTKTARRLTIL 316
            GD P+  F +T +RL ++
Sbjct: 181 VGDVPWKMFVETCQRLRLM 199

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>CEP2_MOUSE (Q60952) Centrosomal protein 2 (Intranuclear matrix protein)|
           (Fragment)
          Length = 609

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
 Frame = -1

Query: 355 QRLHEDGA*ADDTNGHERRQQRSELGGEEGSKLFRHLYVLQLGGAQR-RTVAVLRERR*S 179
           Q L + GA     NG + +Q   +   EE  +L   L  LQL  AQR   + +LRE    
Sbjct: 240 QLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLRE---- 295

Query: 178 GGKPRMASHRGLDASQEA-PPVQAASVFLRL 89
                  SHR L A + A  P+ A     RL
Sbjct: 296 ---ASSPSHRALPAEKPALQPLPAQQELERL 323

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>IAA33_ARATH (Q9FKM7) Putative auxin-responsive protein IAA33 (Putative|
           indoleacetic acid-induced protein 33)
          Length = 171

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
 Frame = -2

Query: 531 IFMQSEDVGRTLDLTAVGSYEELYRRLSDMF--GMEKAE-------LMSHVF-YRDAAGA 382
           + ++   + + + L   GSY+ L   L  MF  G +  +       +  H+  Y D    
Sbjct: 77  VVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTDDLDLSNAIPGHLIAYEDMEND 136

Query: 381 LKHTGDEPFSDFTKTARRLTIL 316
           L   GD  + DF + A+R+ IL
Sbjct: 137 LLLAGDLTWKDFVRVAKRIRIL 158

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>IAA1_ORYSA (Q5VRD1) Auxin-responsive protein IAA1 (Indoleacetic acid-induced|
           protein 1)
          Length = 199

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
 Frame = -2

Query: 504 RTLDLTAVGSYEELYRRLSDMF---------GMEKAELMSHV-------FYRDAAGALKH 373
           R +DL A   Y++L R L D F           ++ +L+  V        Y D  G    
Sbjct: 107 RKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWML 166

Query: 372 TGDEPFSDFTKTARRLTIL 316
            GD P+  F +T +RL ++
Sbjct: 167 VGDVPWKMFVETCQRLRLM 185

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>POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1839

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = -2

Query: 255  FATCTCYSWEGRSAARWRFSESVDRVAANPEWRATAAWMQVKKHHRCRQLQFFSDY 88
            F+ C C +   + +++ + +   +   ++P+WR TA  +  K  H+      FS +
Sbjct: 1454 FSECICINDYAQLSSKTQATIVANHQRSDPDWRLTAVRIFAKAQHKVNDASIFSGW 1509

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>XPO7_MOUSE (Q9EPK7) Exportin-7 (Exp7) (Ran-binding protein 16)|
          Length = 1086

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 468 ELYRRLSDMFGMEKAELMSHVFYRDAAGALKHTGD-EPFSDFTKTARRLTILTDTS-GDS 295
           +LYRRLS++ G+    ++  VF       LK+ G  EP      T++ L +L D S G S
Sbjct: 570 KLYRRLSEVLGLNDETMVLSVFIGKVITNLKYWGRCEPI-----TSKTLQLLNDLSIGYS 624

Query: 294 SV 289
           SV
Sbjct: 625 SV 626

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>POLG_BSTV1 (Q65730) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral ge
          Length = 3093

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 118 VQAASVFLRLLERSQNGTDDCLCDPWTLFFLSLCGGTH 5
           V++ S F+  L +      D +C+P TLF LS    TH
Sbjct: 822 VKSKSAFMEKLNQDNEWLVDMICNPSTLFVLSQLMDTH 859

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>IAA22_ORYSA (Q69TU6) Auxin-responsive protein IAA22 (Indoleacetic acid-induced|
           protein 22)
          Length = 265

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 3/127 (2%)
 Frame = -2

Query: 534 KIFMQSEDVGRTLDLTAVGSYEELYRRLSDMFGMEKAELMSHVFYRDAAGALKHTGDEPF 355
           K+ ++   VGR +DL A  SY+ L + L  MF         H F  D       T D   
Sbjct: 95  KVNLEGYAVGRKIDLKAHRSYDSLSQALQSMF---------HGFLSDGIA----TRDNEL 141

Query: 354 SDFTKTARRLTILT--DTSGDSSVAS*GVRKEASSFATCTCYSWEGRSAARWRF-SESVD 184
               + +++  +L   D  GD  +                   W+GR A   R  +  VD
Sbjct: 142 QRMEEGSKKRYVLVYEDNEGDRMLVG--------------DVPWDGREAGSGRRPAAGVD 187

Query: 183 RVAANPE 163
           +V+  P+
Sbjct: 188 QVSERPD 194

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>TEN3_TENMO (Q27270) Tenecin-3 precursor|
          Length = 96

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 346 HEDGA*ADDTNGHERRQQRSELGGEEGSKLFRH 248
           H DG       GH+  QQ   LGG++G  L  H
Sbjct: 20  HHDGHLGGHQTGHQGGQQGGHLGGQQGGHLGGH 52

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>SYR_RHOBA (Q7URC7) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 671

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
 Frame = +1

Query: 7   GYRHTTKERKVSKDHTNNH---PSHSG--TSLIIGE----KLKLPAPVVLLDLHPGRGGS 159
           G   TT  +KV  D ++ +   P H G   S +IG+     L+     V+ D H G  G+
Sbjct: 107 GVSKTTDPKKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTLRFYGEDVVTDNHLGDWGT 166

Query: 160 PFGVCRHSIYAL*EPPPCGAAPLPAVA 240
            FG+  +      +P    A P+P ++
Sbjct: 167 QFGIIIYGYRNFGDPAKVAANPVPELS 193

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>XPO7_HUMAN (Q9UIA9) Exportin-7 (Exp7) (Ran-binding protein 16)|
          Length = 1086

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 468 ELYRRLSDMFGMEKAELMSHVFYRDAAGALKHTGD-EPFSDFTKTARRLTILTDTS-GDS 295
           +LYRRLS++ G+    ++  VF       LK+ G  EP      T++ L +L D S G S
Sbjct: 570 KLYRRLSEVLGLNDETMVLSVFIGKIITNLKYWGRCEPI-----TSKTLQLLNDLSIGYS 624

Query: 294 SV 289
           SV
Sbjct: 625 SV 626


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,563,304
Number of Sequences: 219361
Number of extensions: 1702714
Number of successful extensions: 5530
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 5255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5496
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result