>NUOM_BUCAI (P57263) NADH-quinone oxidoreductase chain M (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain M) (NDH-1, chain M)
          Length = 505

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 629 FLGDFMSLTGALSTFPLTFVLANHMYLVSNRQRLSSLQKSWH 504
           F+G+F+ L+G    FPL  +LA    + S+   L+ +QK ++
Sbjct: 403 FIGEFLILSGVFEVFPLVSILATIGIVFSSIYSLNVIQKIFY 444

>RPA1_MOUSE (O35134) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
            (RNA polymerase I 194 kDa subunit) (RPA194)
          Length = 1717

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 546  DEVHMVGEHEGERECAERPSEAHEVPQEGQHRGHE 650
            +EV    E EGE E  E   E   +  +G H+GHE
Sbjct: 1430 EEVDYESEEEGEEEEEEEVQEEGNIKGDGVHQGHE 1464

>TAO1A_XENLA (Q6NU21) Serine/threonine-protein kinase TAO1-A (EC 2.7.11.1)|
           (Thousand and one amino acid protein 1-A)
          Length = 1001

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +3

Query: 552 VHMVGEHEG---ERECAERPSEAHEVPQEGQHRGHER 653
           +H+  E E    E E   RPSE H  PQ  +H+ H R
Sbjct: 397 IHLKPEEENYPEEPEPRTRPSEPHSPPQVSRHKSHYR 433

>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +3

Query: 564 GEHEGERECAERPSEAHEVPQEGQHRGHERVDG 662
           G  E E E  +   E H VP  G HRGHE  DG
Sbjct: 456 GHGEEEDEDDDDEGEHHHVPHRG-HRGHEEDDG 487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,913,342
Number of Sequences: 219361
Number of extensions: 1164164
Number of successful extensions: 3176
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3173
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)