ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37e02 |
|---|---|
| Clone Library Name | barley_pub |
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 70.5 bits (171), Expect = 5e-12 Identities = 49/175 (28%), Positives = 83/175 (47%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 ++LF+S + ++E + G+S WW N + I SA L A + +LK L +T F Sbjct: 843 ISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFT 902 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT K + D G L+ F + IP T + ++NIV + G A+ Sbjct: 903 VTSKATDDDDFGE--------LYAFKWTTLLIPPTTVLIINIVGVVAGISDAI--NNGYQ 952 Query: 261 HGGPGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 97 GP G+ W+++ +PF++GL+ R ++ P V + + L+ + F L R Sbjct: 953 SWGPLFGKLFFSFWVIVHLYPFLKGLMGR-QNRTPTIVVIWSVLLASIFSLLWVR 1006
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 69.3 bits (168), Expect = 1e-11 Identities = 54/175 (30%), Positives = 85/175 (48%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 ++LFLS ++E + G+ WW N + I SA L A ILK L +T F Sbjct: 881 LSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFT 940 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT K +S DG D A+ L+ F + IP T L ++N+V + G A+ + Sbjct: 941 VTSK-ASDEDG----DFAE--LYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAI--NSGYQ 991 Query: 261 HGGPGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 97 GP G+ W+++ +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 992 SWGPLFGKLFFAFWVIVHLYPFLKGLMGR-QNRTPTIVVVWSVLLASIFSLLWVR 1045
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 65.5 bits (158), Expect(2) = 2e-11 Identities = 51/173 (29%), Positives = 83/173 (47%) Frame = -1 Query: 615 LFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVT 436 LF S + ++E K ++ WW N + I SA L A +LK +T F VT Sbjct: 885 LFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVT 944 Query: 435 RKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHG 256 K +S DG D A+ L+ F + IP T + ++N+V + G A+ + Sbjct: 945 SK-ASDEDG----DFAE--LYVFKWTSLLIPPTTILLVNLVGIVAGVSYAI--NSGYQSW 995 Query: 255 GPGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 97 GP +G+ + W+V +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 996 GPLMGKLLFAFWVVAHLYPFLKGLLGR-QNRTPTIVIVWSALLASIFSLLWVR 1047 Score = 23.1 bits (48), Expect(2) = 2e-11 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -2 Query: 710 LCYALLGPFCLLTNPVLL 657 L Y +L FCL+TN ++ Sbjct: 854 LAYCMLPAFCLITNTFII 871
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 66.6 bits (161), Expect = 7e-11 Identities = 51/175 (29%), Positives = 85/175 (48%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 + LF+S + ++E + G+S WW N + I SA L A +LK L +T F Sbjct: 896 ILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFT 955 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT K ++ DG D A+ L+ F + IP T + ++N++ + G AV + Sbjct: 956 VTSK-ATDEDG----DFAE--LYIFKWTALLIPPTTVLLVNLIGIVAGVSYAV--NSGYQ 1006 Query: 261 HGGPGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 97 GP G+ W++ +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 1007 SWGPLFGKLFFALWVIAHLYPFLKGLLGR-QNRTPTIVIVWSVLLASIFSLLWVR 1060
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 63.9 bits (154), Expect = 5e-10 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 2/151 (1%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 +ALFLS ++E + G+S W N + I SA L A +LK L +T F Sbjct: 864 LALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFT 923 Query: 441 VTRKESSTSDGGAGTDEADP--GLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAA 268 VT K +S DEAD L+ F + IP T L +LN+V + G A+ Sbjct: 924 VTSKGAS--------DEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAI--NNG 973 Query: 267 VVHGGPGIGEFVCCGWMVLCFWPFVRGLVSR 175 GP G+ W+++ +PF++GL+ R Sbjct: 974 YGSWGPLFGKLFFAFWVIVHLYPFLKGLMGR 1004
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 62.4 bits (150), Expect = 1e-09 Identities = 41/147 (27%), Positives = 68/147 (46%) Frame = -1 Query: 615 LFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVT 436 +F+S + ++E + G+ WW N + I AS+ L A +LK L T F VT Sbjct: 902 MFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVT 961 Query: 435 RKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHG 256 K A D A L+ F + IP T L ++NI+ + VG A+ + Sbjct: 962 SK--------AADDGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAI--SNGYDSW 1011 Query: 255 GPGIGEFVCCGWMVLCFWPFVRGLVSR 175 GP G W+++ +PF++G++ + Sbjct: 1012 GPLFGRLFFALWVIVHLYPFLKGMLGK 1038
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 60.8 bits (146), Expect = 4e-09 Identities = 43/149 (28%), Positives = 67/149 (44%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 +ALF S + ++E + + WW N + I SA L A +LK L ET F Sbjct: 886 MALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFT 945 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT K A D L+ F + IP T L ++N++ + VG A+ + Sbjct: 946 VTSK--------AADDGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAI--SNGYD 995 Query: 261 HGGPGIGEFVCCGWMVLCFWPFVRGLVSR 175 GP G W++L +PF++GL+ + Sbjct: 996 SWGPLFGRLFFAFWVILHLYPFLKGLLGK 1024
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 59.3 bits (142), Expect = 1e-08 Identities = 42/149 (28%), Positives = 69/149 (46%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 +ALF S I ++E + + WW N + I SA L A +LK L +T F Sbjct: 901 MALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFT 960 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT S +D G +D L+ F + IP L ++N++ + VG A+ + Sbjct: 961 VT---SKAADDGEFSD-----LYLFKWTSLLIPPMTLLIINVIGVIVGVSDAI--SNGYD 1010 Query: 261 HGGPGIGEFVCCGWMVLCFWPFVRGLVSR 175 GP G W+++ +PF++GL+ + Sbjct: 1011 SWGPLFGRLFFALWVIIHLYPFLKGLLGK 1039
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 57.4 bits (137), Expect = 4e-08 Identities = 45/173 (26%), Positives = 75/173 (43%) Frame = -1 Query: 615 LFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVT 436 +F+S + ++E + + WW N + I S+ L A +LK L T F VT Sbjct: 906 MFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVT 965 Query: 435 RKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHG 256 K A D L+ F + IP T L ++NIV + VG A+ Sbjct: 966 SK--------AADDGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAI--NNGYDSW 1015 Query: 255 GPGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 97 GP G W+++ +PF++GL+ + + +P + V + L+ + L R Sbjct: 1016 GPLFGRLFFALWVIVHLYPFLKGLLGK-QDRVPTIILVWSILLASILTLLWVR 1067
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 56.6 bits (135), Expect = 7e-08 Identities = 41/149 (27%), Positives = 67/149 (44%) Frame = -1 Query: 621 VALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFE 442 + LF+S + ++E + G+S W N + I SA L A LK L +T F Sbjct: 800 LGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFT 859 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT K + + G L+ + IP T+L ++N+V + G A+ Sbjct: 860 VTSKTADDLEFGE--------LYIVKWTTLLIPPTSLLIINLVGVVAGFSDAL--NKGYE 909 Query: 261 HGGPGIGEFVCCGWMVLCFWPFVRGLVSR 175 GP G+ W++L +PF++GL+ R Sbjct: 910 AWGPLFGKVFFAFWVILHLYPFLKGLMGR 938
>CSTN3_MOUSE (Q99JH7) Calsyntenin-3 precursor| Length = 956 Score = 33.9 bits (76), Expect = 0.52 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = -1 Query: 648 HRMKVFASPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLT---VI 478 H M A P + S H ++ + ++HR + SA+ ++ V+ Sbjct: 802 HSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSHRNSMVPSAATLIIVVCVGFLVL 861 Query: 477 LKTLGLSETVFEVTRKESSTSD-GGAGTDEADPGLFTFDSAPVFI 346 + LGL + + R+ S T GA TD DP LF DSA I Sbjct: 862 MVILGLVR-IHSLHRRVSGTGGPSGASTDPKDPDLFWDDSALTII 905
>UL03_HHV11 (P10187) Protein UL3| Length = 235 Score = 33.9 bits (76), Expect = 0.52 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = +1 Query: 112 HERSHNQTSLHLDAPRDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGA 291 HE + + D+ R + ++ D+P H PE + ATA S RA DDG Sbjct: 39 HESGISPDTTPADSIRGAAVASPDQPLHGGPERE---ATAPSFSPTRA--------DDGP 87 Query: 292 PCPDG 306 PC DG Sbjct: 88 PCTDG 92
>CSTN3_HUMAN (Q9BQT9) Calsyntenin-3 precursor| Length = 956 Score = 32.3 bits (72), Expect = 1.5 Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 3/121 (2%) Frame = -1 Query: 648 HRMKVFASPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLT---VI 478 H M A P + S H ++ + ++HR I SA+ ++ V+ Sbjct: 802 HSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSHRNSMIPSAATLIIVVCVGFLVL 861 Query: 477 LKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVG 298 + LGL R + GA +D DP LF DSA I S N + G Sbjct: 862 MVVLGLVRIHSLHRRVSGAGGPPGASSDPKDPDLFWDDSALTIIVNPMESYQNRQSCVTG 921 Query: 297 A 295 A Sbjct: 922 A 922
>CSTN3_RAT (Q8R553) Calsyntenin-3 precursor| Length = 957 Score = 32.0 bits (71), Expect = 2.0 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Frame = -1 Query: 648 HRMKVFASPVALFLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLT---VI 478 H M A P + S H ++ + ++HR + SA+ ++ V+ Sbjct: 803 HSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSHRNSMVPSAATLIIVVCVGFLVL 862 Query: 477 LKTLGLSETVFEVTRKESSTSD-GGAGTDEADPGLFTFDSAPVFI 346 + LGL + + R+ S T GA D DP LF DSA I Sbjct: 863 MVILGLVR-IHSLHRRVSGTGGPSGASADPKDPDLFWDDSALTII 906
>MEP2_YEAST (P41948) Ammonium transporter MEP2| Length = 499 Score = 32.0 bits (71), Expect = 2.0 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = -1 Query: 549 WWNNHRMQ------RITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEA 388 W N+H Q I +A AW + +++L T+ + S + GTD A Sbjct: 382 WINHHYKQVGYQLAGICAALAWTVTVTSILLLTMN----AIPFLKLRLSADEEELGTDAA 437 Query: 387 DPGLFTFDSAPVFIP 343 G FT++ + +IP Sbjct: 438 QIGEFTYEESTAYIP 452
>CAC1D_HUMAN (Q01668) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) Length = 2161 Score = 31.6 bits (70), Expect = 2.6 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Frame = -1 Query: 519 TSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPV 340 +SAS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 649 SSASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ---- 693 Query: 339 TALSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 205 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 694 ---ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 736
>COX10_NEUCR (Q7S5E7) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 535 Score = 31.2 bits (69), Expect = 3.3 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = -1 Query: 609 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAF--LTVILKTLGLSETVFEVT 436 LS+ I H EYK GL AW N R R+ A + LAF L V L G++E F VT Sbjct: 388 LSWGIRH--EYKAAGLRMLAWTNPARNGRV--ALRYSLAFIPLCVGLSATGVTEWSFAVT 443
>NCKX5_BRARE (Q49SH1) Sodium/potassium/calcium exchanger 5 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 5) (Solute carrier family 24 member 5) (Protein golden) Length = 513 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = -1 Query: 555 RAWWNNHRMQRITSASAWLLAF-------LTVILKTLGLSETVFEVTRKESSTS 415 R +W N M ++ W+ AF +T++ +TLG+ +TV +T + TS Sbjct: 340 RPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIVGETLGIPDTVMGMTLLAAGTS 393
>COX10_GIBZE (Q4I5G1) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 507 Score = 31.2 bits (69), Expect = 3.3 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Frame = -1 Query: 582 EYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR--------KE 427 EYK+ GL AW N R R+ +++ L + L G++E F VT +E Sbjct: 366 EYKKAGLRMLAWTNPARNGRVALRYSFVFIPLCLSLCAAGVTEWSFAVTSFPINAWLIRE 425 Query: 426 SSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIG 277 S G + GLF + S V L++L+ + WR+V G Sbjct: 426 SVRFWRYEGNKGSARGLF-WASVWHLPGVMILALLHKKGMWTRVWRSVFG 474
>DAF2_MOUSE (Q61476) Complement decay-accelerating factor transmembrane isoform| precursor (DAF-TM) (CD55 antigen) Length = 407 Score = 30.8 bits (68), Expect = 4.4 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +1 Query: 160 DSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDG 288 +S+ +P D+P+ ++P PAT HE T D+ + G Sbjct: 319 ESVPNPGDQPTPQKPSTVKVPATQHEPDTTTRTSTDKGESNSG 361
>CBRB_DICD3 (Q47085) Achromobactin transport system permease protein cbrB| Length = 340 Score = 30.8 bits (68), Expect = 4.4 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 390 ADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTA 271 A PGLF ++ +F + +S+ VA++V W A G A Sbjct: 96 ASPGLFGINAGAMFFLIVCVSLFPKVAMSVWLWSAFAGAA 135
>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)| (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX) Length = 365 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Frame = +1 Query: 82 PGRLVPCAEVHERSHNQTSLHLDAP----RDSMLSPADKPSHERPEAQHHPATAHELSDA 249 PGR P A +RS + ++ D+P D SPA PS + TAH+L + Sbjct: 122 PGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPA--PSKRKKRRHRTVFTAHQLEEL 179 Query: 250 RATMNDRRSPD 282 ++ PD Sbjct: 180 EKAFSEAHYPD 190
>GNAS_HOMAM (O16118) Guanine nucleotide-binding protein G(s), alpha subunit| (Adenylate cyclase-stimulating G alpha protein) Length = 379 Score = 30.0 bits (66), Expect = 7.5 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -1 Query: 471 TLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIV 313 TLG+ ET F+V + D G DE + F+ I VTA S N+V Sbjct: 189 TLGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV 241
>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (CHCACHA1D) Length = 2190 Score = 29.6 bits (65), Expect = 9.7 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -1 Query: 513 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 334 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 672 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 714 Query: 333 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 205 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 715 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 757
>CAC1D_MESAU (Q99244) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide isoform 2) Length = 1610 Score = 29.6 bits (65), Expect = 9.7 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -1 Query: 513 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 334 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 650 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 692 Query: 333 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 205 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 693 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 735
>IF2_NEIG1 (Q5F797) Translation initiation factor IF-2| Length = 943 Score = 29.6 bits (65), Expect = 9.7 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +1 Query: 157 RDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGAPCPDGEGHNVQH*ER 336 R PA+KP P ++ P ++ A+A DRR+ DD + +G + Sbjct: 268 RQRPAKPAEKPQAAAPAVENKP-----VNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRD 322 Query: 337 RHRDENG 357 R+ NG Sbjct: 323 RNNARNG 329
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic| kidney disease protein 1) Length = 4303 Score = 29.6 bits (65), Expect = 9.7 Identities = 24/71 (33%), Positives = 28/71 (39%) Frame = -1 Query: 441 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 262 VT DG A D A P P VTA+ LA+GA A++GT V Sbjct: 300 VTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAV-------LALGAGSALLGTDVQV 352 Query: 261 HGGPGIGEFVC 229 P E VC Sbjct: 353 EAAPAALELVC 363
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 29.6 bits (65), Expect = 9.7 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -1 Query: 513 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 334 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 710 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 752 Query: 333 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 205 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 753 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 795
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 29.6 bits (65), Expect = 9.7 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +1 Query: 151 APRDSMLSPADK-PSHERPEAQHHPATAHELSDARATMNDRRSPDD 285 AP+ +LSP+ PSH RP A P+T + AT + +R +D Sbjct: 115 APQHLLLSPSRAGPSHPRPTAVPGPSTRQNQAQWEATRHQQRLHND 160
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 29.6 bits (65), Expect = 9.7 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +1 Query: 136 SLHLDAPRDSMLSPADKPSHER--------PEAQHHPATAHELSDARATMNDRR 273 SLHL +P S L+PA PS R EA P L A A M D R Sbjct: 297 SLHLQSPHSSPLAPAAAPSDPRLQDLKAREAEAWEEPTELLGLPSALAGMQDLR 350
>Y3480_MYCTU (O06343) Hypothetical UPF0089 protein Rv3480c/MT3584| Length = 497 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -3 Query: 610 LELPHIPLDGVQGVRALCPRLVEQPQDATHHLGLRLAPRLPHRDPQDTR 464 +++ H +DG G + L L P D TH L + P R P DT+ Sbjct: 139 IKMHHSLIDGYTGQKMLARSLSTDPHDTTHPLFFNIP--TPGRSPADTQ 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,102,694 Number of Sequences: 219361 Number of extensions: 2086572 Number of successful extensions: 6987 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 6688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6967 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
