| Clone Name | rbaal37d05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | O2T27_HUMAN (Q8NH04) Olfactory receptor 2T27 (Olfactory receptor... | 32 | 1.6 | 2 | OR2T1_HUMAN (O43869) Olfactory receptor 2T1 (Olfactory receptor ... | 32 | 2.0 | 3 | Y110_METJA (Q57574) Hypothetical protein MJ0110 | 31 | 3.5 | 4 | RS7_DEHSC (Q3ZZM7) 30S ribosomal protein S7 | 31 | 3.5 | 5 | RS7_DEHE1 (Q3Z984) 30S ribosomal protein S7 | 31 | 3.5 | 6 | PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-s... | 30 | 4.5 |
|---|
>O2T27_HUMAN (Q8NH04) Olfactory receptor 2T27 (Olfactory receptor OR1-67)| Length = 317 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = -1 Query: 565 VAPLSIIGRVIKTKSVEYMPFSLS--LTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGM 392 + P ++ +V+ +++ + + L LTL+ +FL GL+ D+YVA+ N L + M Sbjct: 77 IVPKMLVDQVMSQRAISFAGCTAQHFLYLTLAGAEFFLLGLMSYDRYVAICNPLHYPVLM 136 Query: 391 IQMVLYM 371 + + ++ Sbjct: 137 SRKICWL 143
>OR2T1_HUMAN (O43869) Olfactory receptor 2T1 (Olfactory receptor 1-25) (OR1-25)| (Olfactory receptor OR1-61) Length = 311 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -1 Query: 565 VAPLSIIGRVIKTKSVEYMPFSLS--LTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGM 392 + P ++ ++ +++ ++ + L LTL +FL GL+ D+YVA+ N L + M Sbjct: 76 IVPKMLVNYLLDQRTISFVGCTAQHFLYLTLVGAEFFLLGLMAYDRYVAICNPLRYPVLM 135 Query: 391 IQMVLYM 371 + V +M Sbjct: 136 SRRVCWM 142
>Y110_METJA (Q57574) Hypothetical protein MJ0110| Length = 93 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = -1 Query: 562 APLSIIGRVIKTKSVEYMPFSLSLTLTLSAIVWFLYGLLIKDKYVALPNILGFTF 398 A L + + +K K + + + +T T +W +YG+L D + + NIL F Sbjct: 23 ASLPQLIKSLKEKDMSNISLAFVITFTTGLTLWLIYGILRNDYPIIVFNILSLMF 77
>RS7_DEHSC (Q3ZZM7) 30S ribosomal protein S7| Length = 156 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +3 Query: 399 KVKPRMFGSATY-LSLMSRP*RNQTMALRVSVREREK 506 +VKPR G ATY + + RP R QTMA+R ++ K Sbjct: 74 EVKPRRVGGATYQVPIEVRPDRAQTMAMRWIIKAARK 110
>RS7_DEHE1 (Q3Z984) 30S ribosomal protein S7| Length = 156 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +3 Query: 399 KVKPRMFGSATY-LSLMSRP*RNQTMALRVSVREREK 506 +VKPR G ATY + + RP R QTMA+R ++ K Sbjct: 74 EVKPRRVGGATYQVPIEVRPDRAQTMAMRWIIKAARK 110
>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2333 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +3 Query: 213 SPAISVTGRTSAHELLSALPTLITTTWSSAGTFHASFPSLASVATT 350 S A V+G +S E+ S+LP+ T+ +G FH +FP++ V T Sbjct: 1698 SGAAEVSGESSGAEVGSSLPS---GTYEGSGNFHPAFPTVFLVDRT 1740 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,644,019 Number of Sequences: 219361 Number of extensions: 1182900 Number of successful extensions: 4031 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3930 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4029 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)