>XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)|
           (HMSH)
          Length = 281

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -2

Query: 581 DDGIISNKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFL 438
           +D II  + +  L Q +P+A L   GQCGH   +E     A+ V +FL
Sbjct: 226 EDRIIPLQASLTLAQWIPNAQLHVFGQCGHWTQIEHAERFARLVENFL 273

>MURI_PSEPK (Q88PW2) Glutamate racemase (EC 5.1.1.3)|
          Length = 265

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = -2

Query: 581 DDGIISNKQAYRLQQELPSAILRQVGQCGHIPHVEKP----REAAKHVLDF 441
           D G+        +Q+ LP+  L  VG CGHIP+ EK     RE  + +  F
Sbjct: 12  DSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRRIAGF 62

>TODF_PSEPU (P23133) 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase (EC 3.1.1.-)|
           (HOHH)
          Length = 276

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 581 DDGIISNKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFLGGD 429
           DD +I  + + RL Q +  + L   G+CGH   +E+ R   + V DFL  +
Sbjct: 225 DDRVIPLETSLRLNQLIEPSQLHVFGRCGHWVQIEQNRGFIRLVNDFLAAE 275

>RSBQ_BACSU (O07015) Sigma factor sigB regulation protein rsbQ|
          Length = 269

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 581 DDGIISNKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFL 438
           DD I        + Q LP + L+Q+   GH PH+  P E  + + D+L
Sbjct: 218 DDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYL 265

>AXUD1_HUMAN (Q96S65) Axin-1 up-regulated gene 1 protein (TGF-beta-induced|
           apoptosis protein 3) (TAIP-3) (URAX1 protein)
          Length = 589

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 376 VDTRVDDMEEAWFALSTLSPPRKSSTCFAASL-GFS 480
           V   +D++E   F L  LSPP  +S+CF  SL GFS
Sbjct: 525 VSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFS 560

>YTXM_BACSU (P23974) Putative esterase ytxM (EC 3.1.-.-)|
          Length = 274

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = -2

Query: 563 NKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFL 438
           N++ +++   LPS+ +  V + GH  HVE+PR   K V +FL
Sbjct: 233 NQEVHKM---LPSSRIEIVPKAGHTVHVEQPRLFGKIVSEFL 271

>PDR15_ORYSA (Q7FMW4) Pleiotropic drug resistance protein 15|
          Length = 1509

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
 Frame = -3

Query: 346  GALLLFNARPAISLTWAKPCNKPSKILPAFWSSRADQRTG--------------PKITSP 209
            G  +LFN   ++SL +  P  KP  ILP    S+ + + G              P+  SP
Sbjct: 800  GFTILFNVLFSLSLMYLNPVGKPQSILPEETDSQENIQEGKNKAHIKQIITVETPEPVSP 859

Query: 208  ---VGMEKVALD*R---TGTASRGRTHVSVCARPSP 119
               + ++KV    R     T+ R  ++++   R +P
Sbjct: 860  NSIITLDKVIQQLRGYSANTSDRSHSYINAAGRTAP 895

>FYV1_DROME (O96838) Putative FYVE finger-containing phosphoinositide kinase|
           (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate
           5-kinase) (PIP5K) (PtdIns(4)P-5-kinase)
          Length = 1809

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 433 PPRKSSTCFAASLGFSTWGMWPHCPTCLKIALGSSCCNR 549
           P  K+  C+  S  FST+    HC  C +I   S CCN+
Sbjct: 185 PDSKAKECYDCSQKFSTFRRKHHCRLCGQI-FCSKCCNQ 222

>MURI_PSESM (Q888B8) Glutamate racemase (EC 5.1.1.3)|
          Length = 275

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 581 DDGIISNKQAYRLQQELPSAILRQVGQCGHIPHVEKPRE 465
           D G+        ++Q LP+  L  +  CGHIP+ EK  E
Sbjct: 22  DSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPE 60

>ALR_BORBU (O51182) Alanine racemase (EC 5.1.1.1)|
          Length = 372

 Score = 24.6 bits (52), Expect(2) = 5.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
 Frame = -1

Query: 411 PGFFHVINSG------INTE-DPVNSTHMAHFYCLTLAQRSP*LGQSPVIS 280
           P F H+ NSG      +N + + V    + + YC +L  + P L   PV+S
Sbjct: 199 PKFVHISNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLS 249



 Score = 23.9 bits (50), Expect(2) = 5.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 527 SAILRQVGQCGHIPHVEKPREAAKHVLDFL 438
           S  L   G C H+P +E  +   K +  FL
Sbjct: 157 SKFLELEGICSHLPSIENFKTTQKQIEQFL 186

>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 496

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -2

Query: 563 NKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFLGG 432
           N  A  + + LP  +L+Q+G  G + ++ K   +AK ++   GG
Sbjct: 449 NMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGMFGG 492

>BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 250

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -2

Query: 578 DGIISNKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFLGG 432
           D ++    A  L   LP A L +   CGH P +  P + A  + D + G
Sbjct: 202 DALMPLAAAEWLATRLPDARLARFDDCGHAPFLSHPEDCAVLIEDVVRG 250

>K0310_HUMAN (O15027) Protein KIAA0310|
          Length = 2179

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 26/97 (26%), Positives = 39/97 (40%)
 Frame = +2

Query: 221 LGACTLISSAAPERRQDLAGLITGLCPSQGDRWASVKQ*KCAMCVLFTGSSVLIPELMTW 400
           +GA +L  +  P    + AG + G   S G   AS  Q +    + F  +  ++P     
Sbjct: 240 VGAGSLCQALLPGPSNEAAGDVWGDTASTGVPDASGSQYENVENLEFVQNQEVLPSEPLN 299

Query: 401 KKPGSPCPRYRLRGSQAHALPPPSASRHGECGRTALP 511
             P SP  ++R        LP P+  RHG    T  P
Sbjct: 300 LDPSSPSDQFRYG-----PLPGPAVPRHGAVCHTGAP 331

>NDED_ALCXX (P94211) N-acyl-D-glutamate deacylase (EC 3.5.1.82)|
           (N-acyl-D-glutamate amidohydrolase)
          Length = 488

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +2

Query: 407 PGSPCPRYRLRGSQAHALPPPSASRHGECGRTALPALKLRWGVPAVTDMLAYC 565
           PGS       R  Q   +    ++ H ECG  +L  +  RWG  AVT     C
Sbjct: 283 PGSSTILIPERADQIDDIRITWSTPHPECGGQSLAEIAARWGCDAVTAARRLC 335

>XYLS1_PSEPU (Q04710) XylDLEGF operon transcriptional activator 1|
          Length = 321

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = -3

Query: 406 LLPCHQLWYQH*GPCEQHAHGALLLFNARPAISLTWAKPCNKPSKILPAFWSSRA 242
           +L  H LW  H G     A G LLL N      LT+++ C K    LP+    RA
Sbjct: 81  ILKGHCLWRDH-GQEHYFAPGELLLLNPDDQADLTYSEDCEKFIVKLPSVVLDRA 134

>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 499

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -2

Query: 563 NKQAYRLQQELPSAILRQVGQCGHIPHVEKPREAAKHVLDFLGG 432
           N  A  + + LP  +L+Q+G  G + ++ K   +AK ++  +GG
Sbjct: 449 NMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGGMGG 492


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,804,610
Number of Sequences: 219361
Number of extensions: 1683315
Number of successful extensions: 4951
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4951
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)