ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal36n22 |
|---|---|
| Clone Library Name | barley_pub |
>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 839 Score = 57.8 bits (138), Expect = 3e-08 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 +DH+D +E +KV SDA +WL K Q+ L +PV+ VS+I K++ LD FC PI Sbjct: 726 YDHLDPTEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFCNPI 785 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQ-------------SNGADESAEPASDGAQDE 361 + P P+A PE++ +G + ++ D +Q Sbjct: 786 IY---------------KPKPKAEVPEDKPKANSEHNGPMDGQSGTETKSDSTKDSSQHT 830 Query: 360 HVGEQMDTD 334 +M+ D Sbjct: 831 KSSGEMEVD 839
>HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 838 Score = 56.6 bits (135), Expect = 7e-08 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 +DH+D +E ++V SD+ WL K Q+ L +PV+ VS+I K++ LD FC PI Sbjct: 726 YDHLDPAEMERVEKYISDSMNWLNSKMNAQNKLSLTQDPVVKVSEIVTKSKELDNFCNPI 785 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYT------PEEQSNGADESAEPASDGAQDEHVGEQMD 340 + E P +A T P + +G++ S +P +Q GE M+ Sbjct: 786 VYKPKPK--------VEAPEDKAKTGSEHNGPMDGQSGSETSPDPPKGSSQHTDSGE-ME 836 Query: 339 TD 334 D Sbjct: 837 VD 838
>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) (HSP70RY) Length = 840 Score = 43.9 bits (102), Expect = 5e-04 Identities = 27/123 (21%), Positives = 49/123 (39%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 +DH+D ++ KV ++A W+ K Q+ +PV+ +I+ K + L C PI Sbjct: 723 YDHLDAADMTKVEKSTNEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTCSPI 782 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDP 322 + P P+ P+E+ A+++ G + TD P Sbjct: 783 I---------------SKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQGTDTAVP 827 Query: 321 SQA 313 S + Sbjct: 828 SDS 830
>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III| Length = 776 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/61 (27%), Positives = 30/61 (49%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 + H+D E +KV+N D + WL E + +Q+ K PV+ +I + + PI Sbjct: 682 YAHLDSKEMEKVINAIEDKKKWLDEARHKQETRSKTDAPVVFTEEILQNKNVFENVVNPI 741 Query: 501 M 499 + Sbjct: 742 L 742
>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) Length = 841 Score = 40.0 bits (92), Expect = 0.007 Identities = 25/121 (20%), Positives = 47/121 (38%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 ++H+D ++ KV ++A W+ K Q+ +PV+ +I+ K + L C PI Sbjct: 724 YEHLDAADVTKVEKSTNEAMEWMNSKLNLQNKQSLTVDPVVKTKEIEAKIKELTSICSPI 783 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDP 322 + P P+ P+E+ A+++ G + D P Sbjct: 784 I---------------SKPKPKVEPPKEEPKHAEQNGPVDGQGDNPGSQAAEHGADTAVP 828 Query: 321 S 319 S Sbjct: 829 S 829
>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 39.3 bits (90), Expect = 0.011 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 ++HID SE +KV ++ W+ Q H +PV+ +I K + L+ C+P+ Sbjct: 741 YNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLHQDPVVRTHEISAKVKELNNVCEPV 800 Query: 501 M 499 + Sbjct: 801 V 801
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 38.1 bits (87), Expect = 0.025 Identities = 26/115 (22%), Positives = 44/115 (38%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 + HI+ E KV + E W K Q+ + +PV+ I+ + +++ C PI Sbjct: 757 YSHIEKDEMAKVEKCLKEKEAWRDSKTSAQNQKAAYQDPVVTAQQIRSEIQSMKFICDPI 816 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDT 337 + E P TP E + D P ++G + G+Q T Sbjct: 817 INKPKPKPK------EEPPKDNGPTPAEAAK--DGGPAPTTEGEEKMDTGDQAPT 863
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 38.1 bits (87), Expect = 0.025 Identities = 28/121 (23%), Positives = 48/121 (39%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 + HI+ + KV + W K Q+ H +PV+ + I+ + +++ C PI Sbjct: 758 YSHIEKEDMAKVEKCVKEKVAWRDSKVNAQNQKAPHQDPVVTAAQIRSEIQSMKFVCDPI 817 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDP 322 + E P TPEE + A P ++G + E+MDT P Sbjct: 818 INKPKPKPK------EEPPKDNGPTPEEAAKDGG-PAPPTTEGGE-----EKMDTSDQAP 865 Query: 321 S 319 + Sbjct: 866 T 866
>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| (Antigen NY-CO-25) Length = 858 Score = 37.4 bits (85), Expect = 0.043 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 ++HID SE +KV ++ W+ Q +PV+ +IK K + L+ C+P+ Sbjct: 740 YNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTCEPV 799 Query: 501 M 499 + Sbjct: 800 V 800
>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 37.4 bits (85), Expect = 0.043 Identities = 26/118 (22%), Positives = 46/118 (38%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 ++HID SE +KV ++ W+ Q +PV+ +I+ K + L+ C+P+ Sbjct: 741 YNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCEPV 800 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKD 328 + L TP+ +E G D A + H E+ + D Sbjct: 801 V--NQPKPKIESPKLERTPNGPNLDKKEDLEGKDNFGAEAPHQNGECHPNEKGSVNMD 856
>OXRP_RAT (Q63617) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) Length = 999 Score = 37.4 bits (85), Expect = 0.043 Identities = 31/109 (28%), Positives = 47/109 (43%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 F ++++ +KV+N D TW +Q LP PVLL DI+ K ALDR + + Sbjct: 849 FTDVEMTTLEKVIN---DTWTWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYL 905 Query: 501 MXXXXXXXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHV 355 + P P P++++ E AS G Q+E V Sbjct: 906 LNKAKFT----------KPRPR---PKDKNGTRTEPPLNASAGDQEEKV 941
>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 37.0 bits (84), Expect = 0.056 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 ++HID SE +KV ++ W+ Q +PV+ +IK K + L+ C+P+ Sbjct: 740 YNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKESLDQDPVVRAQEIKTKIKELNNTCEPV 799 Query: 501 M 499 + Sbjct: 800 V 800
>HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-related 100 kDa| protein E7I) (HSP-E7I) (Heat shock 110 kDa protein) (42 degrees C-HSP) Length = 858 Score = 36.6 bits (83), Expect = 0.073 Identities = 16/61 (26%), Positives = 31/61 (50%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 ++HID SE +KV ++ W+ Q +PV+ +I+ K + L+ C+P+ Sbjct: 741 YNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCEPV 800 Query: 501 M 499 + Sbjct: 801 V 801
>OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) Length = 999 Score = 35.8 bits (81), Expect = 0.12 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 9/125 (7%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPI 502 F ++++ +KV+NE W +Q LP PVLL DI+ K ALDR + + Sbjct: 849 FTEVEMTTLEKVINE---TWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYL 905 Query: 501 MXXXXXXX-----XXXXXPLAETPSPEAYTPEEQS----NGADESAEPASDGAQDEHVGE 349 + AE P + + + + G E AEP S+ + E E Sbjct: 906 LNKAKFTKPRPRPKDKNGTRAEPPLNASASDQGEKVIPPAGQTEDAEPISEPEKVETGSE 965 Query: 348 QMDTD 334 DT+ Sbjct: 966 PGDTE 970
>OXRP_CRIGR (Q60432) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) (170 kDa glucose-regulated protein) Length = 999 Score = 35.0 bits (79), Expect = 0.21 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -1 Query: 681 FDHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDR 517 F ++++ +KV+N D W +Q LP PVLL DI+ K ALDR Sbjct: 849 FTEVEMTTLEKVIN---DTWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDR 900
>HSP68_DROME (O97125) Heat shock protein 68| Length = 635 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = -1 Query: 678 DHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 499 D I ++K +V CS+A WL +N + + K + L++FC PIM Sbjct: 556 DRISAADKSSIVERCSEAMKWL------------DSNTTAEKEEYEYKLKELEQFCSPIM 603
>CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-binding protein B)| (Fibrinogen receptor B) Length = 907 Score = 31.6 bits (70), Expect = 2.3 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -1 Query: 450 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 313 +P P+ + + +G+D ++ SD D G D+D D S++ Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624
>CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-binding protein B)| (Fibrinogen receptor B) Length = 905 Score = 31.6 bits (70), Expect = 2.3 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -1 Query: 450 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 313 +P P+ + + +G+D ++ SD D G D+D D S++ Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624
>HS70L_RAT (P55063) Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein| 1-like) (Heat shock 70 kDa protein 3) (HSP70.3) Length = 641 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = -1 Query: 678 DHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 499 D I S+K+K++++CS+ +WL AN + + K + L+ C PI+ Sbjct: 562 DKISESDKKKILDKCSEVLSWL------------EANQLAEKEEFDHKRKELENMCNPII 609
>ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (ERP99) (Polymorphic tumor rejection antigen 1) (Tumor rejection antigen gp96) Length = 802 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 441 PEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 316 PEA EE ++++E A D QDE GE+MD ++ + Sbjct: 751 PEAQVEEEPEEEPEDTSEDAEDSEQDE--GEEMDAGTEEEEE 790
>PTMS_HUMAN (P20962) Parathymosin| Length = 101 Score = 31.2 bits (69), Expect = 3.1 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -1 Query: 423 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 325 EE+ NGA+E E ++ ++E GE+ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 70
>PTMS_MOUSE (Q9D0J8) Parathymosin| Length = 100 Score = 30.8 bits (68), Expect = 4.0 Identities = 10/36 (27%), Positives = 23/36 (63%) Frame = -1 Query: 423 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 316 EE+ NGA+E E ++ +D+ G++ D ++++ + Sbjct: 38 EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEDE 73
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%) Frame = -1 Query: 444 SPEAYTPEEQ-------SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 301 SPE P++ +NG+D+ A+P++ AQ++ +D+D++ PS + + S Sbjct: 548 SPEKVGPKQAEDAAKSIANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602
>S6A15_BOVIN (Q9XS59) Orphan sodium- and chloride-dependent neurotransmitter| transporter NTT73 (Orphan transporter v7-3) (Solute carrier family 6 member 15) Length = 729 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/70 (32%), Positives = 34/70 (48%) Frame = +1 Query: 337 GVHLLTHMLILSTVASWFSRLICSI*LFFWCISLG*WGFC*RRGLWFWRWPWFGHDGFAE 516 G +LL ++++L L+ I LFF +S+G G+W + P G GFA Sbjct: 97 GAYLLPYLILL---------LVIGIPLFFLELSVGQRIRRGSIGVWNYISPQLGGIGFAS 147 Query: 517 PVKCFSLLLY 546 V CF + LY Sbjct: 148 CVVCFFVALY 157
>TOLA_ECOLI (P19934) Protein tolA| Length = 421 Score = 30.4 bits (67), Expect = 5.2 Identities = 27/109 (24%), Positives = 38/109 (34%) Frame = -1 Query: 657 KQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXX 478 KQK E + + K + DA +D KKKAEA K Sbjct: 130 KQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKAEA--EAAKAAAEAQKKAE 187 Query: 477 XXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDK 331 + + EA E + A E+AE A A+ + E+ DK Sbjct: 188 AAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADK 236
>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)| Length = 101 Score = 30.4 bits (67), Expect = 5.2 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -1 Query: 423 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 325 EE+ NGA+E E ++ +D+ G++ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEE 70
>HS70L_MOUSE (P16627) Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein| 1-like) (Heat shock 70 kDa-like protein 1) (Spermatid-specific heat shock protein 70) Length = 641 Score = 30.0 bits (66), Expect = 6.8 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = -1 Query: 678 DHIDISEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 499 D I S+K+K++++C++ +WL AN + + K + L+ C PI+ Sbjct: 562 DKISESDKKKILDKCNEVLSWL------------EANQLAEKDEFDHKRKELENMCNPII 609
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 29.6 bits (65), Expect = 8.9 Identities = 13/38 (34%), Positives = 26/38 (68%) Frame = -1 Query: 414 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 301 +NG+D+ A+P++ AQ++ +D+D++D S +VS Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604
>PTMS_BOVIN (P08814) Parathymosin| Length = 101 Score = 29.6 bits (65), Expect = 8.9 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -1 Query: 423 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 325 EE+ NGA+E E ++ ++E G++ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEEEDDGDEEDEEEEE 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,093,808 Number of Sequences: 219361 Number of extensions: 1868419 Number of successful extensions: 5932 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5473 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5913 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
