ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37c19 |
|---|---|
| Clone Library Name | barley_pub |
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 306 bits (785), Expect = 2e-83 Identities = 150/151 (99%), Positives = 150/151 (99%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA Sbjct: 275 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 334 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV Sbjct: 335 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 394 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYGK 139 KRVQLADKYLSEAALGQANDDAMKTGAFYGK Sbjct: 395 KRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 273 bits (699), Expect = 2e-73 Identities = 128/151 (84%), Positives = 142/151 (94%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGA Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 337 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NV Sbjct: 338 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 397 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYGK 139 KRVQLAD Y+S+AALG AN DAMKTG+FYGK Sbjct: 398 KRVQLADTYMSQAALGDANQDAMKTGSFYGK 428
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 272 bits (696), Expect = 5e-73 Identities = 128/150 (85%), Positives = 142/150 (94%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTR+DR+GVCKGIFRTDNVPDE +V++VD+FPGQSIDFFGA Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGA 337 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWV + GVENI KRLVNSREGPP F+QPKMTIEKL+EYG+MLV+EQENV Sbjct: 338 LRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENV 397 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYG 142 KRVQLA++YLSEAALG AN DAMKTG+FYG Sbjct: 398 KRVQLAEQYLSEAALGDANSDAMKTGSFYG 427
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 268 bits (686), Expect = 7e-72 Identities = 127/149 (85%), Positives = 142/149 (95%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTD V +E VV+LVDTFPGQSIDFFGA Sbjct: 284 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGA 343 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVR+WV E GVENI+++LVNS+EGPPTF+QPK+TIEKL+EYGHMLV EQENV Sbjct: 344 LRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENV 403 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFY 145 KRVQLADKYL+EAALG+AN+DAMKTG+F+ Sbjct: 404 KRVQLADKYLNEAALGEANEDAMKTGSFF 432
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 264 bits (674), Expect = 2e-70 Identities = 126/150 (84%), Positives = 138/150 (92%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVC GIFR+DNV E +V+LVDTFPGQSIDFFGA Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGA 347 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKW+ +GV++I K+LVNS+EGPPTF+QPKMTIEKL+EYG+MLVQEQENV Sbjct: 348 LRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENV 407 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYG 142 KRVQLADKYLSEAALG AN DAM TG FYG Sbjct: 408 KRVQLADKYLSEAALGDANSDAMNTGTFYG 437
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 262 bits (669), Expect = 6e-70 Identities = 124/150 (82%), Positives = 138/150 (92%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTDNV D+ +V+LVDTFPGQSIDFFGA Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGA 347 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVY DEVRKWV E+GV+ I K+LVNS+EGPP+F+QPKMTI+KL+ YG MLVQEQENV Sbjct: 348 LRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENV 407 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYG 142 KRVQLADKY+SEAALG AN+DA+K G FYG Sbjct: 408 KRVQLADKYMSEAALGDANNDAIKRGTFYG 437
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 261 bits (668), Expect = 8e-70 Identities = 122/148 (82%), Positives = 138/148 (93%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP+E +V++VD FPGQSIDFFGA Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGA 347 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWV E+GV+ I K+LVNS+EGPPTF+QPKMTI+KL++YG+MLV+EQENV Sbjct: 348 LRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENV 407 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAF 148 KRVQLADKY+SEAALG AN DA+K G F Sbjct: 408 KRVQLADKYMSEAALGDANQDAIKRGTF 435
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 257 bits (656), Expect = 2e-68 Identities = 117/149 (78%), Positives = 139/149 (93%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTR+DR+GVCKGIFRTD VP+E + +LVDTFPGQSIDFFGA Sbjct: 290 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGA 349 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKW+ +GV+ K+LVNS+EGPPTFDQPKM+++KL++YG+MLVQEQENV Sbjct: 350 LRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENV 409 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFY 145 KRVQLADKYL+EAALG AN+DA+K+G+F+ Sbjct: 410 KRVQLADKYLNEAALGNANEDAIKSGSFF 438
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 253 bits (647), Expect = 2e-67 Identities = 120/146 (82%), Positives = 135/146 (92%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP+EAVV++VD+FPGQSIDFFGA Sbjct: 287 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGA 346 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWV G+E I ++L+NSR+GPPTF+QPKMT+EKL+EYG+MLVQEQENV Sbjct: 347 LRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENV 406 Query: 231 KRVQLADKYLSEAALGQANDDAMKTG 154 KRVQLA+ YL EAALG AN DA+ TG Sbjct: 407 KRVQLAETYLKEAALGDANADAINTG 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 253 bits (646), Expect = 3e-67 Identities = 120/148 (81%), Positives = 134/148 (90%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP+EAV+++VDTFPGQSIDFFGA Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGA 351 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWV G+E I +L+NS +GPPTF+QPKMT+EKL+EYG+MLVQEQENV Sbjct: 352 LRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENV 411 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAF 148 KRVQLA+ YL EAALG AN DA+ TG F Sbjct: 412 KRVQLAETYLKEAALGDANADAINTGNF 439
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 251 bits (640), Expect = 1e-66 Identities = 117/151 (77%), Positives = 134/151 (88%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVC GIF+TD VP E VV+LVD FPGQSIDFFGA Sbjct: 286 STLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGA 345 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVY DEVRKWV +GV+N+ K+LVNS++GPP F+QP+MT++KLMEYG+MLVQEQENV Sbjct: 346 LRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENV 405 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYGK 139 KRVQLAD+Y+S AALG AN DA+ G F+GK Sbjct: 406 KRVQLADQYMSSAALGDANKDAIDRGTFFGK 436
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 251 bits (640), Expect = 1e-66 Identities = 120/149 (80%), Positives = 132/149 (88%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVC GIFRTDNVP E VV++VD FPGQSIDFFGA Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGA 351 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKWV G+E I +L+NS +GPPTF+QPKMTIEKL+EYG+MLVQEQENV Sbjct: 352 LRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENV 411 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFY 145 KRVQLADKYL EAALG AN DA+ G+F+ Sbjct: 412 KRVQLADKYLKEAALGDANADAINNGSFF 440
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 250 bits (639), Expect = 2e-66 Identities = 116/149 (77%), Positives = 136/149 (91%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTD VP++ +V LVD PGQSIDFFGA Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGA 351 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKW+ +GV+++ K+LVNS+EGPPTFDQPKMT++KL+ Y MLVQEQENV Sbjct: 352 LRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENV 411 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFY 145 KRVQLAD+YL+EAALG AN+DA+K+G+F+ Sbjct: 412 KRVQLADQYLNEAALGNANEDAIKSGSFF 440
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 250 bits (639), Expect = 2e-66 Identities = 122/151 (80%), Positives = 132/151 (87%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYWAPTREDRIGVCKGIFRTD + DE +V LVD FPGQSIDFFGA Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGA 347 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRK+V +GVE I KRLVNSREGPP F+QP+MT EKLMEYG+MLV EQENV Sbjct: 348 LRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENV 407 Query: 231 KRVQLADKYLSEAALGQANDDAMKTGAFYGK 139 KRVQLA+ YLS+AALG AN DA+ G FYGK Sbjct: 408 KRVQLAETYLSQAALGDANADAIGRGTFYGK 438
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 216 bits (550), Expect = 4e-56 Identities = 102/125 (81%), Positives = 112/125 (89%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRM+KFYWAPTREDRIG+C GIFRTD VP E +V+LVDTFPGQSIDFFGA Sbjct: 285 STLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGA 344 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDDEVRKW +GVE I + LVNS+E PPTFDQPKMTIEKL+EYG+MLV EQENV Sbjct: 345 LRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENV 404 Query: 231 KRVQL 217 KRV+L Sbjct: 405 KRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 176 bits (445), Expect = 6e-44 Identities = 89/135 (65%), Positives = 103/135 (76%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEK+YW PTREDRIGVC GIF+ DNV V LVDTFPGQSIDFFGA Sbjct: 261 STLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGA 320 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LRARVYDD VR+W+ + GV+ I ++LVN+R+ + M + L++YG LV EQENV Sbjct: 321 LRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENV 379 Query: 231 KRVQLADKYLSEAAL 187 KRVQLAD YLS A L Sbjct: 380 KRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 152 bits (384), Expect = 7e-37 Identities = 67/129 (51%), Positives = 95/129 (73%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYW P R++++G+ GIF D + V +LVD+FP QSIDFF A Sbjct: 161 STLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSA 220 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LR+R+YD+++R ++ ++G EN+S R+VNS EGPP F +P T+ L+E + +V EQ+ + Sbjct: 221 LRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRI 280 Query: 231 KRVQLADKY 205 + QL D+Y Sbjct: 281 ETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 147 bits (372), Expect = 2e-35 Identities = 67/129 (51%), Positives = 93/129 (72%) Frame = -3 Query: 591 STLYAPXIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 412 STLYAP IRDGRMEKFYW P R+D++G+ GIF D + + +LVDTFP QSIDFF A Sbjct: 161 STLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSA 220 Query: 411 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 232 LR+R+YD ++R ++ ++G E IS R+VNS E PP F +P ++ L+E G++++ EQ+ V Sbjct: 221 LRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRV 280 Query: 231 KRVQLADKY 205 QL D+Y Sbjct: 281 DNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 51.6 bits (122), Expect = 2e-06 Identities = 30/60 (50%), Positives = 31/60 (51%) Frame = -3 Query: 456 LVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 277 LVDTFPGQSIDFFGAL REGPPTF+QP MTIEK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -2 Query: 343 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 200 QAPRQ A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -2 Query: 343 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 200 QAPRQ A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 30.8 bits (68), Expect = 3.1 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -2 Query: 502 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 323 GH PH + PG G G GGH P + P Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839 Query: 322 GGAAHVRPAQ-DDHREAHGVRPHAGPG 245 GG+ RP + H HG RPH PG Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.8 bits (68), Expect = 3.1 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -2 Query: 502 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 323 GH PH + PG G G GGH P + P Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 840 Query: 322 GGAAHVRPAQDD-HREAHGVRPHAGPG 245 GG+ RP + H HG RPH PG Sbjct: 841 GGSGGHRPHEGPGHGGPHGHRPHDVPG 867 Score = 30.4 bits (67), Expect = 4.0 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%) Frame = -2 Query: 502 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 323 GH PH + PG G G + GH P H + Sbjct: 751 GHRPH-EGPGGGMGNSSGHRPHEGPGSGMGSGHRPHEGPGSSMGGGGGHRPHEGPGGGIS 809 Query: 322 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 161 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 810 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 864
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.8 bits (68), Expect = 3.1 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -2 Query: 502 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 323 GH PH + PG G G GGH P + P Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839 Query: 322 GGAAHVRPAQDD-HREAHGVRPHAGPG 245 GG+ RP + H HG RPH PG Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866 Score = 29.6 bits (65), Expect = 6.9 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%) Frame = -2 Query: 502 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 323 GH PH + PG G G + GH P H + Sbjct: 750 GHRPH-EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGIS 808 Query: 322 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 161 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 809 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 863
>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson| protein) (D-ash) Length = 1620 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = -1 Query: 443 SRGSPSTSSARCGHGCTTTRCASGSARSA 357 S +PSTS G G TTT ASG A S+ Sbjct: 647 SSSAPSTSGVATGGGATTTTAASGCASSS 675
>TRPA_BORPE (Q7VTF0) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 285 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 472 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDXGSVQR 588 +RD A+ AHADAV+ G + +E + G+ Q+ Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQAGAQAGADQK 256
>TRPA_BORPA (Q7W5G9) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 285 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 472 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDXGSVQR 588 +RD A+ AHADAV+ G + +E + G+ Q+ Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQTGAQAGADQK 256
>TRPA_BORBR (Q7WD05) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 285 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 472 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDXGSVQR 588 +RD A+ AHADAV+ G + +E + G+ Q+ Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQAGAQAGADQK 256
>IF2_TROWT (Q83GT8) Translation initiation factor IF-2| Length = 803 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 529 PRGPHRRVQGHLPHRQRPGRGRGEAG 452 P HRRV LP ++ P RGRG G Sbjct: 144 PASTHRRVPAPLPQKRTPLRGRGAPG 169
>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2| Length = 803 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 529 PRGPHRRVQGHLPHRQRPGRGRGEAG 452 P HRRV LP ++ P RGRG G Sbjct: 144 PASTHRRVPAPLPQKRTPLRGRGAPG 169
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.3 bits (64), Expect = 9.0 Identities = 29/92 (31%), Positives = 31/92 (33%), Gaps = 4/92 (4%) Frame = -2 Query: 502 GHLPHRQRPGRGRGEAGGHLP--GAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQ 329 GH PH + PG G G GGH P G H G H P Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPHEGPGH-----------------------GGPHGHRPHD 848 Query: 328 LQGGAAHVRPAQDDHR--EAHGVRPHAGPGAG 239 + G H DHR H R H GPG G Sbjct: 849 VPGHRGH------DHRGPPPHEHRGHDGPGHG 874
>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)| Length = 4639 Score = 29.3 bits (64), Expect = 9.0 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -3 Query: 513 GVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 364 G+C+ I D++P E +VRL + +++ F + R+ DD R+W E Sbjct: 2790 GICEAIRPLDSLPVEGLVRL---WAHEALRLF---QDRLVDDSERRWTNE 2833
>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA| Length = 653 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = -2 Query: 334 RQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHED 158 R +G + R DDHR+ H R GPG + P RG P+ R + D Sbjct: 125 RGREGYEGYGRHRADDHRQGHNDRHQGGPG---------DQLPPSRGDQLPTARPAYPD 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,991,416 Number of Sequences: 219361 Number of extensions: 1424529 Number of successful extensions: 5342 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5045 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5328 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
