ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37c19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 1082 bits (546), Expect = 0.0 Identities = 575/581 (98%), Gaps = 3/581 (0%) Strand = Plus / Minus Query: 16 agaagagacttacaattgggttacctgtgcggcgatgaat-aaaaagtttgagtggattt 74 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4166 agaagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggattt 4107 Query: 75 cgggtccaaa-tagtc-aacatatatatagtgcatgcatgcatcttaagtagagtaggac 132 |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4106 cgggtccaaaatagtccaacatatatatagtgcatgcatcgatcttaagtagagtaggac 4047 Query: 133 cttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4046 cttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgc 3987 Query: 193 cgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggac 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3986 cgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggac 3927 Query: 253 cagcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtggg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3926 cagcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtggg 3867 Query: 313 cggcccctccctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgac 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3866 cggcccctccctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgac 3807 Query: 373 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3806 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 3747 Query: 433 ctgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3746 ctgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcg 3687 Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3686 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 3627 Query: 553 catgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 3626 catgcgcccgtcacggatcaggggagcgtacagcgtcgaga 3586 Score = 105 bits (53), Expect = 2e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 482 ttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccag 541 |||||||| ||||||| |||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 6824 ttgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccag 6765 Query: 542 tagaacttctccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 |||||||||||||| || || |||||||||| |||||||| |||||||||| Sbjct: 6764 tagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgaga 6713 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 7229 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 7170 Query: 278 ttctctatggtcatcttgggctggtcgaa 306 ||||| | |||||||| ||||| ||||| Sbjct: 7169 ttctcgactgtcatctttggctgctcgaa 7141 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 367 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 426 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 7080 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 7021
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 1082 bits (546), Expect = 0.0 Identities = 575/581 (98%), Gaps = 3/581 (0%) Strand = Plus / Minus Query: 16 agaagagacttacaattgggttacctgtgcggcgatgaat-aaaaagtttgagtggattt 74 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1597 agaagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggattt 1538 Query: 75 cgggtccaaa-tagtc-aacatatatatagtgcatgcatgcatcttaagtagagtaggac 132 |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1537 cgggtccaaaatagtccaacatatatatagtgcatgcatcgatcttaagtagagtaggac 1478 Query: 133 cttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1477 cttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgc 1418 Query: 193 cgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggac 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1417 cgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggac 1358 Query: 253 cagcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtggg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1357 cagcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtggg 1298 Query: 313 cggcccctccctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgac 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 cggcccctccctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgac 1238 Query: 373 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 1178 Query: 433 ctgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1177 ctgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcg 1118 Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 1058 Query: 553 catgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1057 catgcgcccgtcacggatcaggggagcgtacagcgtcgaga 1017
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 846 bits (427), Expect = 0.0 Identities = 552/589 (93%), Gaps = 15/589 (2%) Strand = Plus / Minus Query: 16 agaagagacttacaattgggttacctgtgcggcgatgaat-aaaaagtttgagtggattt 74 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 1451 agaagagacttacaattgggctacctgtgcggcgatgaatcaaaaagtttgagtggatt- 1393 Query: 75 cgggtccaaa-tagtcaa-catatatatagtgcatgcatgca--------tcttaagtag 124 || ||||||| || || | ||||||||||||||||||||||| ||||||||| Sbjct: 1392 cgagtccaaaatattccagcatatatatagtgcatgcatgcacgcatgcatcttaagta- 1334 Query: 125 agtaggaccttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttgg 184 |||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 1333 --taggactttctacttgccgtagaaggcgccggtcgccatggcgtcgtcgttggcttgg 1276 Query: 185 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1275 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacgcgcttcacgttctcctgc 1216 Query: 245 tcctggaccagcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcg 304 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1215 tcctggaccagcatgtggccgtactccatgagcttctcgatggtcatcttgggctggtcg 1156 Query: 305 aacgtgggcggcccctccctggagttgacgaggcgcttggagatgttctccacgccgatc 364 ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1155 aacgtcggcggcccctccctggagttgacgagccgcttggagatgttctcgacgccgatc 1096 Query: 365 tcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaag 424 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1095 tcgccgacccacttgcgcacctcgtcgtcgtacacccgcgcccgcagcgcgccgaagaag 1036 Query: 425 tcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttg 484 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1035 tcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcggggacgttg 976 Query: 485 tcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtag 544 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 tcggtgcggaagatgcccttgcacacgccgatgcggtcctcccgggtgggcgcccagtag 916 Query: 545 aacttctccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 |||||||||||||| ||||| ||||| | ||| |||||||||||||||| Sbjct: 915 aacttctccatgcggccgtcccggatgaggggcgcgtacagcgtcgaga 867
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 391 bits (197), Expect = e-105 Identities = 359/413 (86%) Strand = Plus / Minus Query: 158 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 217 |||||||||||||| |||||||||| || || || |||||| ||||||||||||| || Sbjct: 908 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 849 Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 848 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 789 Query: 278 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 337 ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 788 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 729 Query: 338 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 397 | ||| ||||||||| |||||| |||||| |||||| || |||||||||||||| Sbjct: 728 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 669 Query: 398 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 457 ||||| || ||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 668 acccgggcacgcagcgcgccgaagaagtcgatggactggccagggaaggtgtcgaccagc 609 Query: 458 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 517 || ||| ||| || |||| |||||||||||||||||||||||| ||||||||| Sbjct: 608 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 549 Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggat 570 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 548 cggtcctcgcgggtgggcgcccagtagaacttctccatgcggccgtcgcggat 496
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 383 bits (193), Expect = e-103 Identities = 358/413 (86%) Strand = Plus / Minus Query: 158 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 217 |||||||||||||| |||||||||| || || || |||||| ||||||||||||| || Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244 Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184 Query: 278 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 337 ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124 Query: 338 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 397 | ||| ||||||||| |||||| |||||| |||||| || |||||||||||||| Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064 Query: 398 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 457 ||||| || ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 1063 acccgggcacgcagcgcgccgaagaaatcgatggactggccagggaaggtgtcgaccagc 1004 Query: 458 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 517 || ||| ||| || |||| |||||||||||||||||||||||| ||||||||| Sbjct: 1003 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 944 Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggat 570 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 943 cggtcctcgcgggtgggcgcccagtagaacttctccatgcggccgtcgcggat 891
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 367 bits (185), Expect = 3e-98 Identities = 356/413 (86%) Strand = Plus / Minus Query: 158 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 217 |||||||||||||| |||||||||| || || || |||||| ||||||||||||| || Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244 Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184 Query: 278 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 337 ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124 Query: 338 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 397 | ||| ||||||||| |||||| |||||| |||||| || |||||||||||||| Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064 Query: 398 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 457 ||| || ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 1063 accgtggcacgcagcgcgccgaagaaatcgatggactggccggggaaggtgtcgaccagc 1004 Query: 458 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 517 || ||| ||| || |||| |||||||||||||||||||||||| ||||||||| Sbjct: 1003 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 944 Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggat 570 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 943 cggtcctcgcgggtgggcgcccagtagaacttctccatgcggccgtcgcggat 891
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1070 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1069 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1010 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1009 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 950 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 949 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 890 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 889 tcacggatgagcggcgcgtacagcgtggaga 859
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1357 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1298 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1297 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1238 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1237 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1178 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1177 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1118 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1117 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1058 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1057 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 998 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 997 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 938 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 937 tcacggatgagcggcgcgtacagcgtggaga 907
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1308 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1249 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1189 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1188 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1129 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1128 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1069 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1068 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1009 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1008 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 949 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 948 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 889 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 888 tcacggatgagcggcgcgtacagcgtggaga 858
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1346 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1287 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1286 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1227 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1226 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1167 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1166 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1107 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1106 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1047 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1046 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 987 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 986 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 927 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 926 tcacggatgagcggcgcgtacagcgtggaga 896
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1345 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1286 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1285 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1226 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1225 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1166 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1165 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1106 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1105 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1046 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1045 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 986 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 985 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 926 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 925 tcacggatgagcggcgcgtacagcgtggaga 895
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1129 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1070 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1069 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1010 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1009 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 950 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 949 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 890 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 889 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 830 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 829 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 770 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 769 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 710 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 709 tcacggatgagcggcgcgtacagcgtggaga 679
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1350 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1291 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1290 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1231 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1230 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1171 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1170 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1111 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1110 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1051 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1050 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 991 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 990 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 931 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 930 tcacggatgagcggcgcgtacagcgtggaga 900
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 270 bits (136), Expect = 5e-69 Identities = 372/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1105 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1104 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1045 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1044 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 985 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 984 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 925 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 924 tcacggatgagcggcgcgtacagcgtggaga 894
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 262 bits (132), Expect = 1e-66 Identities = 371/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1314 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1255 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1254 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1195 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 |||||||| |||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1194 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1135 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1134 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1075 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1074 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1015 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1014 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 955 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 954 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 895 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 894 tcacggatgagcggcgcgtacagcgtggaga 864
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 262 bits (132), Expect = 1e-66 Identities = 371/451 (82%) Strand = Plus / Minus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 563 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 504 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 503 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 444 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 |||||||| |||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 443 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 384 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 383 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 324 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 442 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 323 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 264 Query: 443 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 502 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 263 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 204 Query: 503 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 562 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 203 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 144 Query: 563 tcacggatcangggagcgtacagcgtcgaga 593 |||||||| | || ||||||||||| |||| Sbjct: 143 tcacggatgagcggcgcgtacagcgtggaga 113
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 212 bits (107), Expect = 1e-51 Identities = 181/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||||||||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 627 gtcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 568 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 567 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 508 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 507 cacgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 448 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 447 gatgagcggcgcgtacagcgtggaga 422
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 208 bits (105), Expect = 2e-50 Identities = 193/223 (86%) Strand = Plus / Minus Query: 371 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 430 ||||||||||||||||| ||||||||||||| || ||||| || ||||||||||||||| Sbjct: 1124 acccacttgcgcacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatg 1065 Query: 431 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 490 ||||| || ||||| ||||| || | | | || || | |||||| |||||||||||| Sbjct: 1064 gactgtcctgggaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtc 1005 Query: 491 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 550 ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1004 tggaagatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttc 945 Query: 551 tccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 ||||| || ||||||||||| | ||| |||||||||||||||| Sbjct: 944 tccatacgaccgtcacggatgaggggcgcgtacagcgtcgaga 902 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| ||||||||||||||||||| | | Sbjct: 1277 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1218 Query: 278 ttctctatggtcatcttgggctggtcgaa 306 ||||| | |||||||||||||| ||||| Sbjct: 1217 ttctccaccgtcatcttgggctgctcgaa 1189
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||||||||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 619 gtcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 560 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 559 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 500 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 499 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 440 Query: 568 gatcangggagcgtacagcgtcgaga 593 || | || ||||||||||| |||| Sbjct: 439 aatgagcggcgcgtacagcgtggaga 414
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 514 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 454 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 453 gatgagcggcgcgtacagcgtggaga 428
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 639 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 580 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 579 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 520 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 519 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 460 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 459 gatgagcggcgcgtacagcgtggaga 434
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 204 bits (103), Expect = 2e-49 Identities = 180/206 (87%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 637 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 578 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 577 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 518 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 517 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 458 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 457 gatgagcggcgcgtacagcgtggaga 432
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 202 bits (102), Expect = 9e-49 Identities = 191/221 (86%) Strand = Plus / Minus Query: 371 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 430 |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 1134 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatg 1075 Query: 431 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 490 ||||| || ||||||||||| || | | | || || | |||||| |||||||||||| Sbjct: 1074 gactgtcctgggaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtc 1015 Query: 491 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 550 ||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1014 tggaagatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttc 955 Query: 551 tccatgcgcccgtcacggatcangggagcgtacagcgtcga 591 ||||| || |||||| | || | ||| |||||||||||||| Sbjct: 954 tccatacgaccgtcaggaataaggggggcgtacagcgtcga 914 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| ||||||||||||||||||| | | Sbjct: 1287 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1228 Query: 278 ttctctatggtcatcttgggctggtcgaa 306 ||||| | |||||||||||||| ||||| Sbjct: 1227 ttctccaccgtcatcttgggctgctcgaa 1199
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 196 bits (99), Expect = 6e-47 Identities = 179/206 (86%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 637 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 578 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 577 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 518 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 517 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 458 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 457 gatgagcggcgcgtacagcgtggaga 432
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 196 bits (99), Expect = 6e-47 Identities = 179/206 (86%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 196 bits (99), Expect = 6e-47 Identities = 179/206 (86%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 456 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 455 gatgagcggcgcgtacagcgtggaga 430
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 196 bits (99), Expect = 6e-47 Identities = 179/206 (86%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 639 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 580 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 579 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 520 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 519 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 460 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 459 gatgagcggcgcgtacagcgtggaga 434
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 188 bits (95), Expect = 1e-44 Identities = 178/206 (86%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||| ||||||||||||||||||| Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcgttgcggaagatgcccttgca 514 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 454 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 453 gatgagcggcgcgtacagcgtggaga 428
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 188 bits (95), Expect = 1e-44 Identities = 178/206 (86%) Strand = Plus / Minus Query: 388 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 447 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574 Query: 448 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 507 ||| || ||| || ||| |||||| |||||| |||| ||||||||||||||||||| Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcgttgcggaagatgcccttgca 514 Query: 508 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 567 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 454 Query: 568 gatcangggagcgtacagcgtcgaga 593 ||| | || ||||||||||| |||| Sbjct: 453 gatgagcggcgcgtacagcgtggaga 428
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 174 bits (88), Expect = 2e-40 Identities = 189/223 (84%) Strand = Plus / Minus Query: 371 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 430 |||||||||||||||||||||||||||||||| || ||||| || ||||| ||||||||| Sbjct: 263 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatg 204 Query: 431 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 490 || || || ||||||||||| || | | | || |||| |||||| ||| |||||||| Sbjct: 203 gattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtc 144 Query: 491 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 550 ||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 143 tggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttc 84 Query: 551 tccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 ||||| || || |||||||||| || ||||||| |||||||| Sbjct: 83 tccatacgaccatcacggatcagaggggcgtacaacgtcgaga 41 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 416 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 357 Query: 278 ttctctatggtcatcttgggctg 300 ||||| | |||||||| ||||| Sbjct: 356 ttctccactgtcatctttggctg 334
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 174 bits (88), Expect = 2e-40 Identities = 189/223 (84%) Strand = Plus / Minus Query: 371 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 430 |||||||||||||||||||||||||||||||| || ||||| || ||||| ||||||||| Sbjct: 1113 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatg 1054 Query: 431 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 490 || || || ||||||||||| || | | | || |||| |||||| ||| |||||||| Sbjct: 1053 gattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtc 994 Query: 491 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 550 ||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 993 tggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttc 934 Query: 551 tccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 ||||| || || |||||||||| || ||||||| |||||||| Sbjct: 933 tccatacgaccatcacggatcagaggggcgtacaacgtcgaga 891 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1266 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1207 Query: 278 ttctctatggtcatcttgggctg 300 ||||| | |||||||| ||||| Sbjct: 1206 ttctccactgtcatctttggctg 1184
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 159 bits (80), Expect = 1e-35 Identities = 190/227 (83%) Strand = Plus / Minus Query: 367 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 426 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 1197 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 1138 Query: 427 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 486 ||||| || || ||||||||||| || | | | || || | |||||| ||| ||||| Sbjct: 1137 aatggattgtcctgggaaggtgtcgacgatctttacgacagactcgtcacagacattgtc 1078 Query: 487 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 546 ||| ||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct: 1077 ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 1018 Query: 547 cttctccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 ||||||||| || || |||||||||| |||||||| |||||||||| Sbjct: 1017 cttctccatacgaccatcacggatcagaggagcgtagagcgtcgaga 971 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1346 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1287 Query: 278 ttctctatggtcatcttgggctggtcgaa 306 ||||| | |||||||| ||||| ||||| Sbjct: 1286 ttctcgactgtcatctttggctgctcgaa 1258
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 159 bits (80), Expect = 1e-35 Identities = 190/227 (83%) Strand = Plus / Minus Query: 367 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 426 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 942 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 883 Query: 427 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 486 ||||| || || ||||||||||| || | | | || || | |||||| ||| ||||| Sbjct: 882 aatggattgtcctgggaaggtgtcgacgatctttacgacagactcgtcacagacattgtc 823 Query: 487 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 546 ||| ||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct: 822 ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 763 Query: 547 cttctccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 ||||||||| || || |||||||||| |||||||| |||||||||| Sbjct: 762 cttctccatacgaccatcacggatcagaggagcgtagagcgtcgaga 716 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1091 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1032 Query: 278 ttctctatggtcatcttgggctggtcgaa 306 ||||| | |||||||| ||||| ||||| Sbjct: 1031 ttctcgactgtcatctttggctgctcgaa 1003
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 149 bits (75), Expect = 1e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 468 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 527 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 108728 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 108787 Query: 528 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcg 587 ||||||| |||||||||||||||||||| |||||||||||||| | || |||||||||| Sbjct: 108788 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 108847 Query: 588 tcgaga 593 | |||| Sbjct: 108848 tggaga 108853 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 108311 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 108370 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 108371 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 108430 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 108431 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 108490 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 108491 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 108550 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 423 |||||||||||||| || || || || || ||||||||||| Sbjct: 108551 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 108591 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 471 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 530 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 112435 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 112494 Query: 531 tgggcgcccagtagaacttctccatgcgcccgtcacggat 570 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 112495 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 112534 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 185 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 244 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 112186 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 112245 Query: 245 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 300 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 112246 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 112305 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 346 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 405 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 112344 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 112403 Query: 406 ccgcagcgcgccgaagaagtcgatgg 431 ||||||||| |||||||||||||||| Sbjct: 112404 ccgcagcgccccgaagaagtcgatgg 112429
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 149 bits (75), Expect = 1e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 468 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 527 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 30605 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 30664 Query: 528 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcg 587 ||||||| |||||||||||||||||||| |||||||||||||| | || |||||||||| Sbjct: 30665 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 30724 Query: 588 tcgaga 593 | |||| Sbjct: 30725 tggaga 30730 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 30188 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 30247 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 30248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 30307 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 30308 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 30367 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 30368 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 30427 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 423 |||||||||||||| || || || || || ||||||||||| Sbjct: 30428 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 30468 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 471 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 530 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 34312 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 34371 Query: 531 tgggcgcccagtagaacttctccatgcgcccgtcacggat 570 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 34372 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 34411 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 185 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 244 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 34063 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 34122 Query: 245 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 300 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 34123 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 34182 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 346 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 405 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 34221 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 34280 Query: 406 ccgcagcgcgccgaagaagtcgatgg 431 ||||||||| |||||||||||||||| Sbjct: 34281 ccgcagcgccccgaagaagtcgatgg 34306
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 149 bits (75), Expect = 1e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 468 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 527 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 28303867 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 28303926 Query: 528 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcg 587 ||||||| |||||||||||||||||||| |||||||||||||| | || |||||||||| Sbjct: 28303927 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 28303986 Query: 588 tcgaga 593 | |||| Sbjct: 28303987 tggaga 28303992 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 28303450 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28303509 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 28303510 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28303569 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 28303570 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28303629 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 28303630 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28303689 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 423 |||||||||||||| || || || || || ||||||||||| Sbjct: 28303690 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 28303730 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 471 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 530 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 28307574 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 28307633 Query: 531 tgggcgcccagtagaacttctccatgcgcccgtcacggat 570 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 28307634 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 28307673 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 185 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 244 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 28307325 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28307384 Query: 245 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 300 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 28307385 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28307444 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 346 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 405 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 28307483 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28307542 Query: 406 ccgcagcgcgccgaagaagtcgatgg 431 ||||||||| |||||||||||||||| Sbjct: 28307543 ccgcagcgccccgaagaagtcgatgg 28307568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 149 bits (75), Expect = 1e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 468 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 527 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 28286316 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 28286375 Query: 528 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcg 587 ||||||| |||||||||||||||||||| |||||||||||||| | || |||||||||| Sbjct: 28286376 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 28286435 Query: 588 tcgaga 593 | |||| Sbjct: 28286436 tggaga 28286441 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 143 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 202 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 28285899 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28285958 Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 28285959 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28286018 Query: 263 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 322 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 28286019 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28286078 Query: 323 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 382 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 28286079 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28286138 Query: 383 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 423 |||||||||||||| || || || || || ||||||||||| Sbjct: 28286139 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 28286179 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 471 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 530 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 28290023 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 28290082 Query: 531 tgggcgcccagtagaacttctccatgcgcccgtcacggat 570 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 28290083 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 28290122 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 185 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 244 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 28289774 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28289833 Query: 245 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 300 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 28289834 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28289893 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 346 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 405 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 28289932 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28289991 Query: 406 ccgcagcgcgccgaagaagtcgatgg 431 ||||||||| |||||||||||||||| Sbjct: 28289992 ccgcagcgccccgaagaagtcgatgg 28290017
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 194 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 253 |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| ||| Sbjct: 952 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 893 Query: 254 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 313 ||||||| ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 892 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 833 Query: 314 ggcccctcc 322 ||||||||| Sbjct: 832 ggcccctcc 824 Score = 95.6 bits (48), Expect = 2e-16 Identities = 182/227 (80%) Strand = Plus / Minus Query: 356 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 415 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 790 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 731 Query: 416 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 475 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 730 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 671 Query: 476 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 535 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 670 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 611 Query: 536 gcccagtagaacttctccatgcgcccgtcacggatcangggagcgta 582 |||||||||||||||||||| || ||||||||||| | ||| ||||| Sbjct: 610 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgta 564
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 194 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 253 |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| ||| Sbjct: 1146 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 1087 Query: 254 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 313 ||||||| ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 1086 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1027 Query: 314 ggcccctcc 322 ||||||||| Sbjct: 1026 ggcccctcc 1018 Score = 95.6 bits (48), Expect = 2e-16 Identities = 182/227 (80%) Strand = Plus / Minus Query: 356 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 415 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 984 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 925 Query: 416 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 475 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 924 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 865 Query: 476 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 535 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 864 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 805 Query: 536 gcccagtagaacttctccatgcgcccgtcacggatcangggagcgta 582 |||||||||||||||||||| || ||||||||||| | ||| ||||| Sbjct: 804 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgta 758
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 194 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 253 |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| ||| Sbjct: 1253 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1194 Query: 254 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 313 ||||| | ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 1193 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1134 Query: 314 ggcccctcc 322 ||||||||| Sbjct: 1133 ggcccctcc 1125 Score = 95.6 bits (48), Expect = 2e-16 Identities = 182/227 (80%) Strand = Plus / Minus Query: 356 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 415 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 1091 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 1032 Query: 416 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 475 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 1031 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 972 Query: 476 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 535 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 971 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 912 Query: 536 gcccagtagaacttctccatgcgcccgtcacggatcangggagcgta 582 |||||||||||||||||||| || ||||||||||| | ||| ||||| Sbjct: 911 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgta 865
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 194 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 253 |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| ||| Sbjct: 1116 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1057 Query: 254 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 313 ||||| | ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 1056 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 997 Query: 314 ggcccctcc 322 ||||||||| Sbjct: 996 ggcccctcc 988 Score = 95.6 bits (48), Expect = 2e-16 Identities = 182/227 (80%) Strand = Plus / Minus Query: 356 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 415 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 954 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 895 Query: 416 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 475 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 894 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 835 Query: 476 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 535 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 834 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 775 Query: 536 gcccagtagaacttctccatgcgcccgtcacggatcangggagcgta 582 |||||||||||||||||||| || ||||||||||| | ||| ||||| Sbjct: 774 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgta 728
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 109 bits (55), Expect = 1e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 492 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 551 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 2370 ggaagatgcccatgcacacgccgatgcggtcctcgcgggtggggttccagtagtacttct 2311 Query: 552 ccatgcgcccgtcacggatcangggagcgtacag 585 ||||||| || || ||||||| ||| |||||||| Sbjct: 2310 ccatgcggccatcgcggatcaggggcgcgtacag 2277 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 373 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 432 ||||| ||||||| |||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 2739 ccactggcgcaccatgtcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 2680 Query: 433 ctgccccgggaaggtgtccaccag 456 ||| || ||||||||||||||||| Sbjct: 2679 ctggccggggaaggtgtccaccag 2656 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 212 tcggcgagctgcacacgcttgacgttctcctgctc 246 ||||| |||||||| |||||||||||||||||||| Sbjct: 3239 tcggccagctgcacgcgcttgacgttctcctgctc 3205
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 109 bits (55), Expect = 1e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 492 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 551 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 930 ggaagatgcccatgcacacgccgatgcggtcctcgcgggtggggttccagtagtacttct 871 Query: 552 ccatgcgcccgtcacggatcangggagcgtacag 585 ||||||| || || ||||||| ||| |||||||| Sbjct: 870 ccatgcggccatcgcggatcaggggcgcgtacag 837 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 373 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 432 ||||| ||||||| |||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 1049 ccactggcgcaccatgtcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 990 Query: 433 ctgccccgggaaggtgtccaccag 456 ||| || ||||||||||||||||| Sbjct: 989 ctggccggggaaggtgtccaccag 966 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 212 tcggcgagctgcacacgcttgacgttctcctgctc 246 ||||| |||||||| |||||||||||||||||||| Sbjct: 1207 tcggccagctgcacgcgcttgacgttctcctgctc 1173
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 93.7 bits (47), Expect = 6e-16 Identities = 82/94 (87%) Strand = Plus / Minus Query: 492 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 551 ||||||| ||| |||| ||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 1859 ggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtacttct 1800 Query: 552 ccatgcgcccgtcacggatcangggagcgtacag 585 ||||||| ||||||||||| | ||| |||||||| Sbjct: 1799 ccatgcggccgtcacggatgaggggggcgtacag 1766 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 215 gcgagctgcacacgcttgacgttctcctgctc 246 ||||||||||| |||||||| ||||||||||| Sbjct: 2136 gcgagctgcacgcgcttgacattctcctgctc 2105 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 416 ccgaagaagtcgatggactgccccgggaagg 446 |||||||||||||| |||||||| ||||||| Sbjct: 1935 ccgaagaagtcgatcgactgcccggggaagg 1905
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 83.8 bits (42), Expect = 6e-13 Identities = 65/73 (89%) Strand = Plus / Minus Query: 512 ccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatc 571 ||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 1065 ccgatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacggata 1006 Query: 572 angggagcgtaca 584 | ||||||||||| Sbjct: 1005 aggggagcgtaca 993
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 79.8 bits (40), Expect = 9e-12 Identities = 60/67 (89%) Strand = Plus / Minus Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcanggga 577 |||||||| |||||||| |||||||||||||||||||| || || |||||||| | |||| Sbjct: 2801 cggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacggataagggga 2742 Query: 578 gcgtaca 584 ||||||| Sbjct: 2741 gcgtaca 2735
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 79.8 bits (40), Expect = 9e-12 Identities = 60/67 (89%) Strand = Plus / Minus Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcanggga 577 |||||||| |||||||| |||||||||||||||||||| || || |||||||| | |||| Sbjct: 1173 cggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacggataagggga 1114 Query: 578 gcgtaca 584 ||||||| Sbjct: 1113 gcgtaca 1107
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 218 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 277 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 210 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 151 Query: 278 ttctctatggtcatcttgggctg 300 ||||| | |||||||| ||||| Sbjct: 150 ttctcgactgtcatctttggctg 128 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 371 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 426 |||||||||||||||||||||||||||||||| || ||||| || ||||| ||||| Sbjct: 57 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtc 2
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 75.8 bits (38), Expect = 1e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 524 tcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtac 583 ||||||||||| |||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 1014 tcgcgggtgggagcccagtagaacttctccatacgaccgtcacggatgagaggagcgtac 955 Query: 584 a 584 | Sbjct: 954 a 954
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 1074 catacgtccatcacggatgagaggagcgta 1045
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 1074 catacgtccatcacggatgagaggagcgta 1045
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 1103 catacgtccatcacggatgagaggagcgta 1074
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 985 catacgtccatcacggatgagaggagcgta 956
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 900 catacgtccatcacggatgagaggagcgta 871
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Plus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 14214 catacgtccatcacggatgagaggagcgta 14243
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 988 catacgtccatcacggatgagaggagcgta 959
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 977 catacgtccatcacggatgagaggagcgta 948
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 985 catacgtccatcacggatgagaggagcgta 956
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 988 catacgtccatcacggatgagaggagcgta 959
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 1103 catacgtccatcacggatgagaggagcgta 1074
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 69.9 bits (35), Expect = 9e-09 Identities = 76/90 (84%) Strand = Plus / Minus Query: 493 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 552 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070 Query: 553 catgcgcccgtcacggatcangggagcgta 582 ||| || || |||||||| | |||||||| Sbjct: 3069 catacgtccatcacggatgagaggagcgta 3040
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/65 (87%) Strand = Plus / Minus Query: 529 ggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcgt 588 |||||| |||||||| ||||||||||| || ||||||||||| | || ||||||||||| Sbjct: 993 ggtgggtgcccagtaaaacttctccatacgaccgtcacggatgagcggcgcgtacagcgt 934 Query: 589 cgaga 593 ||||| Sbjct: 933 cgaga 929
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 60.0 bits (30), Expect = 9e-06 Identities = 89/109 (81%) Strand = Plus / Minus Query: 485 tcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtag 544 ||||||||||| || |||||||| || || | |||||| || | || || ||||||||| Sbjct: 1046 tcggtgcggaaaattcccttgcaaacaccaacgcggtcgtcccttgttggtgcccagtag 987 Query: 545 aacttctccatgcgcccgtcacggatcangggagcgtacagcgtcgaga 593 ||||||||||| ||||| ||||| || | ||||| |||||||| |||| Sbjct: 986 aacttctccatacgcccatcacgaatgagaggagcatacagcgttgaga 938
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 229 cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 288 |||||||||||||||||||||||| |||||| ||||| | | |||||| || || || Sbjct: 1293 cttgacgttctcctgctcctggacaagcatgcctccgtagccaaggagcttatcaattgt 1234 Query: 289 catcttgggctg 300 |||||||||||| Sbjct: 1233 catcttgggctg 1222 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggat 570 |||||||| | |||||| ||||||||||| |||||||| || || |||||||| Sbjct: 1004 cggtcctccctggtgggtgcccagtagaatttctccatacggccatcacggat 952
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 52.0 bits (26), Expect = 0.002 Identities = 52/61 (85%) Strand = Plus / Minus Query: 524 tcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtac 583 |||||||| || ||||||||||| |||||||| || || |||||||| | |||||| ||| Sbjct: 123 tcgcgggttggtgcccagtagaatttctccatacgaccatcacggataaggggagcatac 64 Query: 584 a 584 | Sbjct: 63 a 63
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Minus Query: 529 ggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcgt 588 |||||||||||||||||| |||||||| || || ||||| || | |||||||||| || Sbjct: 836 ggtgggcgcccagtagaatttctccatacgaccatcacgaatgagaggagcgtacaatgt 777 Query: 589 cgaga 593 ||||| Sbjct: 776 cgaga 772
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/65 (84%) Strand = Plus / Minus Query: 529 ggtgggcgcccagtagaacttctccatgcgcccgtcacggatcangggagcgtacagcgt 588 |||||||||||||||||| |||||||| || || ||||| || | |||||||||| || Sbjct: 1009 ggtgggcgcccagtagaatttctccatacgaccatcacgaatgagaggagcgtacaatgt 950 Query: 589 cgaga 593 ||||| Sbjct: 949 cgaga 945
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 485 tcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtag 544 ||||| ||||| || |||||||| || || |||||||| || | || || ||||||||| Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983 Query: 545 aacttctccatgcgcccgtcacggat 570 ||||||||||| || || |||||||| Sbjct: 982 aacttctccatacgaccatcacggat 957
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 518 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggat 570 |||||||| || ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 208 cggtcctcacgagtgggtgcccagtagaatttctccatacgaccatcacggat 156
>gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H08 mRNA sequence Length = 488 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 233 acgttctcctgctcctggaccagcatgtggccgtac 268 |||||||||||||| ||||| ||||||| ||||||| Sbjct: 36 acgttctcctgctcttggacgagcatgttgccgtac 1
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 48.1 bits (24), Expect = 0.033 Identities = 41/47 (87%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtaca 584 |||||||||||||||||| ||||| ||||| |||| ||||| |||| Sbjct: 678 ccagtagaacttctccatacgcccatcacgaatcaatggagcataca 632
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 536 gcccagtagaacttctccatgcgcccgtcacggat 570 |||||||||||||||||||| || || |||||||| Sbjct: 424 gcccagtagaacttctccatacgaccatcacggat 390
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 536 gcccagtagaacttctccatgcgcccgtcacggat 570 |||||||||||||||||||| || || |||||||| Sbjct: 222 gcccagtagaacttctccatacgaccatcacggat 188 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 263 ccgtactccatgagcttctctatggtcatctt 294 |||||||| | ||||||||| ||||||||||| Sbjct: 495 ccgtactcgaggagcttctcaatggtcatctt 464
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 536 gcccagtagaacttctccatgcgcccgtcacggat 570 |||||||||||||||||||| || || |||||||| Sbjct: 963 gcccagtagaacttctccatacgaccatcacggat 929
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 536 gcccagtagaacttctccatgcgcccgtcacggat 570 |||||||||||||||||||| || || |||||||| Sbjct: 982 gcccagtagaacttctccatacgaccatcacggat 948 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 263 ccgtactccatgagcttctctatggtcatctt 294 |||||||| | ||||||||| ||||||||||| Sbjct: 1255 ccgtactcgaggagcttctcaatggtcatctt 1224
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 923
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Minus Query: 386 tcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaag 445 ||||| ||||| ||||| |||| || || |||||||| |||||||| || || |||||| Sbjct: 950 tcgtcatcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaag 891 Query: 446 gtgtc 450 ||||| Sbjct: 890 gtgtc 886
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 170620 gcttgacattctcctgttcctggaccagc 170592
>ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA Length = 8280 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 4777 gcttgacattctcctgttcctggaccagc 4749
>ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript variant 3 (Dsp), mRNA Length = 8583 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 4996 gcttgacattctcctgttcctggaccagc 4968
>ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA Length = 9592 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 5360 gcttgacattctcctgttcctggaccagc 5332
>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence Length = 199240 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 40085 gcttgacattctcctgttcctggaccagc 40057
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 936 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 889
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 923
>dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300002E22 product:desmoplakin, full insert sequence Length = 1423 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 803 gcttgacattctcctgttcctggaccagc 775
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 998 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 951
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 944 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 897
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Minus Query: 386 tcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaag 445 ||||| ||||| ||||| |||| || || |||||||| |||||||| || || |||||| Sbjct: 951 tcgtcatcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaag 892 Query: 446 gtgtc 450 ||||| Sbjct: 891 gtgtc 887
>gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:4949004) Length = 2915 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 gcttgacgttctcctgctcctggaccagc 256 ||||||| |||||||| |||||||||||| Sbjct: 2607 gcttgacattctcctgttcctggaccagc 2579
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 957 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 910
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 42.1 bits (21), Expect = 2.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 538 ccagtagaacttctccatgcgcccgtcacggatcangggagcgtacag 585 |||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 97615 ccagtagaacttctccattcttccttcacggatcagtggagcatacag 97662
>gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome 12, complete sequence Length = 155861 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 ggtgtccaccagcctcacca 464 |||||||||||||||||||| Sbjct: 136818 ggtgtccaccagcctcacca 136799
>gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IMAGE:5188566), complete cds Length = 1475 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 956 ctccatgagcttctctatgg 937
>gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 989 ctccatgagcttctctatgg 970
>gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IMAGE:5590211), complete cds Length = 1471 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 959 ctccatgagcttctctatgg 940
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 40.1 bits (20), Expect = 8.1 Identities = 74/92 (80%) Strand = Plus / Minus Query: 203 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 262 ||||||||||| || | ||| || | ||| || ||||| ||||| || || ||||||| | Sbjct: 1332 aggtacttgtcagctaactgaactctcttaacattctcttgctcttgaacaagcatgttg 1273 Query: 263 ccgtactccatgagcttctctatggtcatctt 294 |||||||| | |||||| || || |||||||| Sbjct: 1272 ccgtactcgaggagcttatcgatagtcatctt 1241
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 catatatatagtgcatgcatgcat 115 ||||| |||||||||||||||||| Sbjct: 122744 catatgtatagtgcatgcatgcat 122721
>ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g05590) partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccgtactccatgagcttctc 282 |||||||||||||||||||| Sbjct: 212 ccgtactccatgagcttctc 193
>gb|L00071.1|HUMREN08 Human renin gene, exon 8 Length = 172 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 124 ctccatgagcttctctatgg 105
>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence Length = 198453 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 catatatatagtgcatgcat 111 |||||||||||||||||||| Sbjct: 31511 catatatatagtgcatgcat 31492
>ref|NM_000537.2| Homo sapiens renin (REN), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the SOX13 gene for SOX13 SRY (sex determining region Y)-box 13, two novel genes, a novel gene (FLJ10761), the 3' end of the REN gene for renin and two CpG islands, complete sequence Length = 101862 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 95051 ctccatgagcttctctatgg 95070
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 cccgtgcccgcagcgcgccg 418 |||||||||||||||||||| Sbjct: 2456174 cccgtgcccgcagcgcgccg 2456155
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19, complete sequence Length = 187377 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tatatagtgcatgcatgcat 115 |||||||||||||||||||| Sbjct: 65570 tatatagtgcatgcatgcat 65551
>emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105-401) Length = 1096 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 609 ctccatgagcttctctatgg 590
>emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clone DKFZp469I191) Length = 1474 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>emb|CR536498.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0620D for gene REN, renin; complete cds, incl. stopcodon Length = 1221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 930 ctccatgagcttctctatgg 911
>gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds Length = 14148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 11638 ctccatgagcttctctatgg 11619
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ccacggcctcgtccgggacg 481 |||||||||||||||||||| Sbjct: 20046 ccacggcctcgtccgggacg 20027
>emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin Length = 1203 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 912 ctccatgagcttctctatgg 893
>emb|CR857478.1| Pongo pygmaeus mRNA; cDNA DKFZp469O0929 (from clone DKFZp469O0929) Length = 2747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 ggtgtccaccagcctcacca 464 |||||||||||||||||||| Sbjct: 224 ggtgtccaccagcctcacca 243
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atagtcaacatatatatagt 103 |||||||||||||||||||| Sbjct: 82063 atagtcaacatatatatagt 82082
>gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, 8, and 9 Length = 3057 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 2172 ctccatgagcttctctatgg 2153
>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence Length = 36615 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 cctcgtccgggacgttgtcg 487 |||||||||||||||||||| Sbjct: 34609 cctcgtccgggacgttgtcg 34590
>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence Length = 177303 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 catatatatagtgcatgcat 111 |||||||||||||||||||| Sbjct: 68633 catatatatagtgcatgcat 68652
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cacgccgatctcgccgaccc 374 |||||||||||||||||||| Sbjct: 2558497 cacgccgatctcgccgaccc 2558516
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete sequence Length = 146998 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aacatatatatagtgcatgc 109 |||||||||||||||||||| Sbjct: 109 aacatatatatagtgcatgc 90
>gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8 Length = 142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 112 ctccatgagcttctctatgg 93
>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence Length = 157544 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 acatatatatagtgcatgcatgca 114 ||||||||||||| |||||||||| Sbjct: 121059 acatatatatagtacatgcatgca 121036
>ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 930 ctccatgagcttctctatgg 911
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cgcgccgaagaagtcgatgg 431 |||||||||||||||||||| Sbjct: 2367826 cgcgccgaagaagtcgatgg 2367845 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgcgccgaagaagtcgatgg 431 |||||||||||||||||||| Sbjct: 425250 cgcgccgaagaagtcgatgg 425231
>gb|AC153534.2| Mus musculus 10 BAC RP23-360K7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207306 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aaatagtcaacatatatata 101 |||||||||||||||||||| Sbjct: 106986 aaatagtcaacatatatata 107005
>gb|AC153863.6| Mus musculus 10 BAC RP23-149M7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203121 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aaatagtcaacatatatata 101 |||||||||||||||||||| Sbjct: 35055 aaatagtcaacatatatata 35074
>gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ctccatgagcttctctatgg 287 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20, complete sequence Length = 170767 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tgagcttctctatggtcatcttgg 296 |||||||||| ||||||||||||| Sbjct: 59941 tgagcttctcaatggtcatcttgg 59964
>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence Length = 151468 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 aacatatatatagtgcatgc 109 |||||||||||||||||||| Sbjct: 19290 aacatatatatagtgcatgc 19309
>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete sequence Length = 224188 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 ggtgtccaccagcctcacca 464 |||||||||||||||||||| Sbjct: 69683 ggtgtccaccagcctcacca 69664
>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete sequence Length = 175802 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tgcatgcatgcatcttaagt 122 |||||||||||||||||||| Sbjct: 22325 tgcatgcatgcatcttaagt 22306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,191,842 Number of Sequences: 3902068 Number of extensions: 4191842 Number of successful extensions: 80156 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 79394 Number of HSP's gapped (non-prelim): 711 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
