| Clone Name | rbaal36n18 |
|---|---|
| Clone Library Name | barley_pub |
>TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein| Length = 507 Score = 63.9 bits (154), Expect = 3e-10 Identities = 27/56 (48%), Positives = 39/56 (69%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTDWNKEVGEARKRL 405 V+G+P GC+LG LG AGIW GMI G +QT+ L+ +T++T+W EV A +R+ Sbjct: 437 VIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWTSEVENAAQRV 492
>NORM_PSESM (Q88BA2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 37.4 bits (85), Expect = 0.031 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILV----WVTVRTDWNKEVGEA 417 ++ P LLG Y D GA+G+W G+ G F V L W T R + VG A Sbjct: 402 LIAAPAAWLLGFYADGGASGVWWGLALGLFCSAVALTYAFEWKTARLLRKEAVGAA 457
>NORM_RHOPA (Q6NB79) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 474 Score = 37.0 bits (84), Expect = 0.040 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 V+G P +LG + DLG G+W G+ G + +LVW Sbjct: 421 VIGFPFCWVLGFHTDLGPFGVWIGLAVGLVVYAALLVW 458
>NORM_PSEAE (Q9HTR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 488 Score = 36.2 bits (82), Expect = 0.068 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGG----TFMQTVILVWVTVRTDWNKEVGEARKRL 405 +VG+P CLL GAAG+W G+ GG T+ W T R EA Sbjct: 402 LVGVPLACLLAFAAGWGAAGVWWGLAGGLACAAIGLTLAFEWKTARLLPKATASEASALN 461 Query: 404 HKWEGNKAP 378 + G AP Sbjct: 462 CRAAGRGAP 470
>NORM_BACSU (O31855) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 452 Score = 35.0 bits (79), Expect = 0.15 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGG 489 V+G+P G ++G + LGA G W G+I G Sbjct: 400 VIGLPVGYMVGTFTSLGAFGYWIGLIAG 427
>NORM_BRUSU (Q8G2I1) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 35.0 bits (79), Expect = 0.15 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVIL 465 VG+P G +L F +G GIW G+ G M V++ Sbjct: 420 VGLPLGAVLAFQFGMGGVGIWLGLAAGLGMVAVLM 454
>NORM_BRUME (Q8YFD7) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 35.0 bits (79), Expect = 0.15 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVIL 465 VG+P G +L F +G GIW G+ G M V++ Sbjct: 420 VGLPLGAVLAFQFGMGGVGIWLGLAAGLGMVAVLM 454
>NORM_BACHD (Q9KEJ2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 34.3 bits (77), Expect = 0.26 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 ++G+P G LL + LG G W G+I G + L W Sbjct: 400 IIGLPTGYLLANFSPLGPYGYWIGLITGLASCAIALSW 437
>NORM_BACLD (Q65IG9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 452 Score = 33.9 bits (76), Expect = 0.34 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGG 489 ++G+P G ++G Y GA G W G+I G Sbjct: 400 IIGLPVGFVIGTYTSFGAFGYWIGLITG 427
>NORM_BURVI (Q9F5N7) Multidrug resistance protein norM (Multidrug-efflux| transporter) Length = 462 Score = 33.5 bits (75), Expect = 0.44 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 +G P G L + LGA G+W G+ G V++ W Sbjct: 412 IGFPTGYWLAFHAGLGARGLWWGLAAGLASVAVLMAW 448
>NORM_BACC1 (Q73BB8) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 454 Score = 33.1 bits (74), Expect = 0.58 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGM-IGGTFMQTVILV 462 V+G+P G +L Y D A G W G+ IG F T +L+ Sbjct: 400 VIGLPLGYILATYTDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_BACHK (Q6HLG9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 33.1 bits (74), Expect = 0.58 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGM-IGGTFMQTVILV 462 V+G+P G +L Y D A G W G+ IG F T +L+ Sbjct: 400 VIGLPLGYILATYTDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_BACCZ (Q63DZ4) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 33.1 bits (74), Expect = 0.58 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGM-IGGTFMQTVILV 462 V+G+P G +L Y D A G W G+ IG F T +L+ Sbjct: 400 VIGLPLGYILATYTDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_BACAN (Q81T85) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 33.1 bits (74), Expect = 0.58 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGM-IGGTFMQTVILV 462 V+G+P G +L Y D A G W G+ IG F T +L+ Sbjct: 400 VIGLPLGYILATYTDWAAKGYWIGLIIGLAFGATFLLI 437
>NORM_RHILO (Q98D15) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 32.7 bits (73), Expect = 0.75 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTD 441 VG+P G LL +F GIW G+ G + +L+ +R D Sbjct: 415 VGLPLGVLLAFHFGFHGVGIWIGLSSGLAVVAALLLTRWLRRD 457
>NORM_NEIMA (Q9JV27) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 459 Score = 32.0 bits (71), Expect = 1.3 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 566 GIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 G+ G LL FD+G G W+ +I + + LVW Sbjct: 408 GLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVW 443
>NORM_GEOKA (Q5KZL2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 455 Score = 31.6 bits (70), Expect = 1.7 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTDWNK 432 VG+P GC L GA G W G+I G + L + +R W + Sbjct: 401 VGLPLGCALALLTAAGAFGYWIGLIAGLATGALFLSF-RLRAVWRR 445
>NORM_THEMA (Q9WZS2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 464 Score = 31.6 bits (70), Expect = 1.7 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = -1 Query: 563 IPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTDWNKEVGEARKRL 405 +P ++ YF LG G W GMI ++ + + + W K R+R+ Sbjct: 408 LPVAFVMVKYFQLGLLGAWIGMIADIIFRSTLKLLFFLSGKWEKRAVLTRERV 460
>NORM_ACIAD (Q6FEY7) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 449 Score = 31.2 bits (69), Expect = 2.2 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILV 462 VV P G L +G AG+W G+I G + V+L+ Sbjct: 399 VVAFPVGTYLARVAKMGPAGVWLGLITGLSIACVLLL 435
>YD338_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7 intergenic| region Length = 695 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = -1 Query: 566 GIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTDWNK 432 GIP +L +FD+ G+W G+ + ++ + + DW+K Sbjct: 614 GIPLALILSWFFDMKLYGLWIGIGSAMLLIGLVEAYYVLFPDWDK 658
>NORM_BURPS (Q63S57) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 468 Score = 30.8 bits (68), Expect = 2.9 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 +G P G + LGA G+W G+ G +++ W Sbjct: 413 IGFPTGYWFAFHAGLGARGLWWGLAAGLASVAMLMTW 449
>NORM_BURMA (Q62LW6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 468 Score = 30.8 bits (68), Expect = 2.9 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 +G P G + LGA G+W G+ G +++ W Sbjct: 413 IGFPTGYWFAFHAGLGARGLWWGLAAGLASVAMLMTW 449
>MDTK_ERWAM (Q7WTR3) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 30.4 bits (67), Expect = 3.7 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDL----GAAGIWSGMIGGTFMQTVILVW 459 ++G+P G LLG L G AG W G I G ++++W Sbjct: 397 ILGLPIGYLLGMTNLLLPAMGPAGFWIGFIIGLTSSAIMMIW 438
>NORM_BRAJA (Q89W72) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 466 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILV 462 V P +L + LGA G+W G GTF+ +LV Sbjct: 419 VAFPVAWVLAFHTGLGAVGVWIGFSIGTFVYAGLLV 454
>NORM_BACCR (Q81G28) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 452 Score = 30.0 bits (66), Expect = 4.9 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGG 489 ++G+P G +L Y + A G W G+I G Sbjct: 400 IIGLPLGYILATYTEWAAKGYWIGLIIG 427
>YMO3_YEAST (Q03673) Hypothetical 22.7 kDa protein in CDC5-MVP1 intergenic| region Length = 198 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/33 (48%), Positives = 17/33 (51%) Frame = -3 Query: 297 KMCKMHCSSCNPPLKFRTSDLLSRLRNHDSSGN 199 K+ K C S L R SDLL RL HDS N Sbjct: 75 KVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSN 107
>NORM_NEIMB (Q9K015) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 459 Score = 30.0 bits (66), Expect = 4.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 Query: 566 GIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 G+ G LL F++G G W+ +I + + LVW Sbjct: 408 GLLPGYLLAYRFNMGIYGFWTALIASLTIAAIALVW 443
>NORM_SYNY3 (Q55364) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 461 Score = 30.0 bits (66), Expect = 4.9 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 +G+ LLG Y L AG+W G G ++ +W Sbjct: 408 IGLTASYLLGFYTPLSGAGVWIGTYIGLAAASIAYLW 444
>HUL4_YEAST (P40985) Probable ubiquitin-protein ligase HUL4 (EC 6.3.2.-) (HECT| ubiquitin ligase 4) Length = 892 Score = 30.0 bits (66), Expect = 4.9 Identities = 19/74 (25%), Positives = 33/74 (44%) Frame = -3 Query: 462 VGHCEDRLEQRGRRSEEKIA*VGRQQGASVSRPGMKQLIVYMISRDGVRSQVDLPKMCKM 283 V H ++RL + GRR+ E+ + G+ + K+ S V + D + + Sbjct: 28 VAHTKNRLPKSGRRTSERSLAASVKDGSCSNSKSNKR-----NSSASVSGEEDKSCLISL 82 Query: 282 HCSSCNPPLKFRTS 241 +C C PL+F S Sbjct: 83 NCLCCGVPLRFPAS 96
>NORM_XYLFA (Q9PA34) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVW 459 +G+P G LG + + G+W G+I G V+L W Sbjct: 419 LGMPLGLGLGFALEWNSRGMWIGLIIGLTAAAVLLGW 455
>MRAZ_BACFR (Q64ZL3) Protein mraZ| Length = 158 Score = 29.6 bits (65), Expect = 6.4 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -1 Query: 440 WNKEVGEARKRLHKWEGN 387 WN+E+ E R+RL+KW N Sbjct: 55 WNEELDELRQRLNKWNAN 72
>MRAZ_BACFN (Q5LII9) Protein mraZ| Length = 158 Score = 29.6 bits (65), Expect = 6.4 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -1 Query: 440 WNKEVGEARKRLHKWEGN 387 WN+E+ E R+RL+KW N Sbjct: 55 WNEELDELRQRLNKWNAN 72
>NORM_DEIRA (Q9RY44) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 451 Score = 29.6 bits (65), Expect = 6.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 572 VVGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILV 462 VVG+ G +L LGA G+W G+ G + + LV Sbjct: 402 VVGLGLGSVLSSVAGLGARGLWFGLTAGLTLAGLSLV 438
>ZN499_HUMAN (Q96K62) Zinc finger protein 499| Length = 511 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +1 Query: 376 RGALLPSHLCNLFLASPTSLFQSVLTVTHTRITVCIKVPPIIPLQ 510 R A L +H C L SP FQ L + H+ I +VPP++P Q Sbjct: 40 REASLRAHRCVLAAGSP--FFQDKLLLGHSEI----RVPPVVPAQ 78
>NORM_BORPA (Q7WAK9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTD 441 VG+P G L + G+WSG+ G + V+++ +R D Sbjct: 410 VGLPSGAALAFWAGWRGVGVWSGLAIGLALVAVLMMQRWLRRD 452
>NORM_BORBR (Q7WJR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 569 VGIPXGCLLGXYFDLGAAGIWSGMIGGTFMQTVILVWVTVRTD 441 VG+P G L + G+WSG+ G + V+++ +R D Sbjct: 410 VGLPSGAALAFWAGWRGVGVWSGLAIGLALVAVLMMQRWLRRD 452
>NORM_VIBF1 (Q5E4Y6) Multidrug resistance protein norM (Na(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 460 Score = 29.3 bits (64), Expect = 8.3 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = -1 Query: 572 VVGIPXGCLLGXYF----DLGAAGIWSGMIGGTFMQTVILVWVTVRTDW 438 +VG+P G +LG +G G W G IGG ++L T R W Sbjct: 396 IVGLPSGYVLGMTDWIREPMGVYGFWFGFIGGLTTSAILL---TCRLLW 441 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,427,953 Number of Sequences: 219361 Number of extensions: 1547940 Number of successful extensions: 3912 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3911 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)