>RU2A_MOUSE (P57784) U2 small nuclear ribonucleoprotein A' (U2 snRNP-A')|
          Length = 255

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 407 GVPRDSQYGGEVGRRIEILKDACEMNSSLLAEVERLK 297
           G+P D + GG     +E +K+A   N+S LAEVERLK
Sbjct: 186 GLPTDKKKGGPSAGDVEAIKNAIA-NASTLAEVERLK 221

>YJAA_ECOLI (P09162) Hypothetical protein yjaA|
          Length = 127

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = -3

Query: 437 ETMLQSLVLQGVPRDSQYGGEVGRRIEILKDACEMNSSLLAEVE 306
           E +LQ LVLQ  PR + +     +R++I+  A EMN   L++VE
Sbjct: 44  EKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVE 87

>GUC2F_HUMAN (P51841) Retinal guanylyl cyclase 2 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2F, retinal) (RETGC-2) (Rod outer
           segment membrane guanylate cyclase 2) (ROS-GC2)
           (Guanylate cyclase F) (GC-F)
          Length = 1108

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 310 TSAKREEFISHASFKISILRPTSPPYCESRGTPCRTRLWSIVSWCC 447
           TS     FISH       + PT+P YCE+      +    I SW C
Sbjct: 106 TSRALSSFISHHQMASGFIGPTNPGYCEAASLLGNSWDKGIFSWAC 151

>RU2A_MACFA (Q4R8Y8) U2 small nuclear ribonucleoprotein A' (U2 snRNP-A')|
          Length = 255

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 407 GVPRDSQYGGEVGRRIEILKDACEMNSSLLAEVERLK 297
           G+P D + GG     +E +K+A   N+S LAEVERLK
Sbjct: 186 GLPTDKKKGGPSPGDVEAIKNAIA-NASTLAEVERLK 221

>RU2A_HUMAN (P09661) U2 small nuclear ribonucleoprotein A' (U2 snRNP-A')|
          Length = 255

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 407 GVPRDSQYGGEVGRRIEILKDACEMNSSLLAEVERLK 297
           G+P D + GG     +E +K+A   N+S LAEVERLK
Sbjct: 186 GLPTDKKKGGPSPGDVEAIKNAIA-NASTLAEVERLK 221

>GUC2F_RAT (P51842) Retinal guanylyl cyclase 2 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2F, retinal) (RETGC-2) (Rod outer
           segment membrane guanylate cyclase 2) (ROS-GC2)
           (Guanylate cyclase F) (GC-F)
          Length = 1108

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 310 TSAKREEFISHASFKISILRPTSPPYCESRGTPCRTRLWSIVSWCC 447
           TS     FISH       + P +P YCE+      +    I SW C
Sbjct: 106 TSKALTSFISHQQMASGFVGPANPGYCEAASLLGNSWDKGIFSWAC 151

>TX022_DENAN (P25684) Toxin C10S2C2|
          Length = 60

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 373 TSPPYCESRGTPCRTRLWSIVSWCC 447
           TSP Y   RG  C T +W   + CC
Sbjct: 29  TSPDYISDRGCGCPTAMWPYQTACC 53

>MMSA_PSEAE (P28810) Methylmalonate-semialdehyde dehydrogenase [acylating] (EC|
           1.2.1.27) (MMSDH)
          Length = 496

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -3

Query: 449 KQHHETMLQSLVLQGVPRDSQYGGEVGRRIEILKDACEMNSSLLAE-VERLKTSID 285
           K+HH+ + + +  +         G+V R IE+++ AC + S L+ E VE +  +ID
Sbjct: 77  KEHHDELAKIVSSELGKTFEDAKGDVWRGIEVVEHACNVPSLLMGETVENVARNID 132

>MET10_SCHPO (Q09878) Probable sulfite reductase [NADPH] flavoprotein component|
           (EC 1.8.1.2)
          Length = 1006

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 336 LTCILQDFNSPANFTTVLRIPW-YALQDETLEHSLVVLLLGVAPDERLDHLVAHF 497
           LT +++D ++     T  R+P  Y +  +  EHS+ +L   +APDE    L   F
Sbjct: 424 LTDVVKDVDADITILTTDRLPLHYRVLAKAAEHSICLLQSSIAPDEATKKLPYEF 478

>GUC2F_BOVIN (O02740) Retinal guanylyl cyclase 2 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2F, retinal) (RETGC-2) (Rod outer
           segment membrane guanylate cyclase 2) (ROS-GC2)
           (Guanylate cyclase F) (GC-F)
          Length = 1103

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +1

Query: 295 VFSLSTSAKR--EEFISHASFKISILRPTSPPYCESRGTPCRTRLWSIVSWCC 447
           +F+    A R    FISH       + P +P YCE+      +    I SW C
Sbjct: 99  IFNEDCQASRALSSFISHHQMASGFIGPANPGYCEAASLLGNSWDKGIFSWAC 151

>IFE_BRALA (Q04948) Non-neuronal cytoplasmic intermediate filament protein|
          Length = 464

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 350 KDACEMNSSLLAEVERLKTSIDV*LSARA*L*ERWS*AREEDSSPFSFFHLIFAELIRAL 171
           +D   + S L AE+ERLK  +D    AR  L  + S A+EE      F   +  E IR L
Sbjct: 185 QDEAGLRSELEAEIERLKKELDAATMARLDLENKLSTAQEE----IDFLKRVHDEEIRQL 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,716,131
Number of Sequences: 219361
Number of extensions: 1443165
Number of successful extensions: 3830
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3830
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)