ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37c15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransf... 177 2e-44
2PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (... 176 3e-44
3PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransf... 174 2e-43
4PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC... 170 2e-42
5GH317_ARATH (Q9FZ87) Indole-3-acetic acid-amido synthetase GH3.1... 32 1.4
6OS9_YARLI (Q6C3U1) Protein OS-9 homolog precursor 31 3.1
7EFG_LACLA (Q9CDG1) Elongation factor G (EF-G) 30 4.0
8TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine syntheta... 30 4.0
9SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2 30 4.0
10CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-de... 30 4.0
11SAFB2_HUMAN (Q14151) Scaffold attachment factor B2 30 5.3
12KSGA_METKA (Q8TWU7) Probable dimethyladenosine transferase (EC 2... 30 5.3
13RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 29 9.0

>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC|
           2.1.1.103)
          Length = 475

 Score =  177 bits (449), Expect = 2e-44
 Identities = 83/111 (74%), Positives = 98/111 (88%)
 Frame = -2

Query: 580 KVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVL 401
           KVLI+DYCRS  TPS EFA YIKQRGYDLHDV+ YG+ML+DAGF DVIAEDRTDQF++VL
Sbjct: 364 KVLITDYCRSAETPSPEFAEYIKQRGYDLHDVQAYGQMLKDAGFDDVIAEDRTDQFVQVL 423

Query: 400 ERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 248
            REL + EK KE F++DFS+EDY+DIV GWSAKL+R+++GEQKWGLFIA K
Sbjct: 424 RRELEKVEKEKEEFISDFSEEDYNDIVGGWSAKLERTASGEQKWGLFIADK 474



to top

>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)|
           (PEAMT 1) (AtNMT1)
          Length = 491

 Score =  176 bits (447), Expect = 3e-44
 Identities = 82/111 (73%), Positives = 96/111 (86%)
 Frame = -2

Query: 580 KVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVL 401
           KVLISDYCRSP TPS EF+ YIKQRGYDLHDV+ YG+ML+DAGF DVIAEDRTDQF++VL
Sbjct: 380 KVLISDYCRSPKTPSAEFSEYIKQRGYDLHDVQAYGQMLKDAGFTDVIAEDRTDQFMQVL 439

Query: 400 ERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 248
           +REL   EK KE F++DFS+EDYDDIV GW +KL+R ++ EQKWGLFIA K
Sbjct: 440 KRELDRVEKEKEKFISDFSKEDYDDIVGGWKSKLERCASDEQKWGLFIANK 490



to top

>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC|
           2.1.1.103)
          Length = 490

 Score =  174 bits (440), Expect = 2e-43
 Identities = 79/111 (71%), Positives = 96/111 (86%)
 Frame = -2

Query: 580 KVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVL 401
           KVLI+DYCRSP TPS +FA YIK+RGYDLHDV+ YG+ML DAGF +VIAEDRTDQF++VL
Sbjct: 379 KVLITDYCRSPKTPSPDFAIYIKKRGYDLHDVQAYGQMLRDAGFEEVIAEDRTDQFMKVL 438

Query: 400 ERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 248
           +REL   EK KE F++DFS+EDY+DI+ GW +KL RSS+GEQKWGLFIA +
Sbjct: 439 KRELDAVEKEKEEFISDFSKEDYEDIIGGWKSKLLRSSSGEQKWGLFIAKR 489



to top

>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)|
          Length = 494

 Score =  170 bits (431), Expect = 2e-42
 Identities = 79/111 (71%), Positives = 97/111 (87%)
 Frame = -2

Query: 580 KVLISDYCRSPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVL 401
           KVLISDYC+S GTPS EFAAYI+QRGYDLHDVK YGKML+DAGF +VIAE+RTDQF++VL
Sbjct: 383 KVLISDYCKSAGTPSAEFAAYIRQRGYDLHDVKAYGKMLKDAGFVEVIAENRTDQFIQVL 442

Query: 400 ERELGETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 248
           ++EL   E+ K+ F+ DFS+EDY+DIV+GW AKL R++ GEQ+WGLFIA K
Sbjct: 443 QKELDALEQEKDDFIDDFSEEDYNDIVDGWKAKLVRTTEGEQQWGLFIAKK 493



to top

>GH317_ARATH (Q9FZ87) Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-)|
           (Auxin-responsive GH3-like protein 17) (AtGH3-17)
          Length = 609

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = -2

Query: 496 LHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDI 323
           L D+ T  + ++    H +++++   Q+LR      GE +KN+++F       +YDD+
Sbjct: 17  LEDLTTNAEAIQQQVLHQILSQNSGTQYLRAFLD--GEADKNQQSFKNKVPVVNYDDV 72



to top

>OS9_YARLI (Q6C3U1) Protein OS-9 homolog precursor|
          Length = 558

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -2

Query: 535 EEFAAYIKQRGYDLHDVKTYG-KMLEDAGFHDVIAEDRTDQFLRVLERELGETEK 374
           EE  A+ +++G D+ +++  G  ML+DAG  DV+A   TD+ ++ L +E  +++K
Sbjct: 385 EEKYAWWQEQG-DMSNLEIQGLTMLDDAGIEDVLAR-ATDEVMKQLNKEAKQSKK 437



to top

>EFG_LACLA (Q9CDG1) Elongation factor G (EF-G)|
          Length = 709

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 406 VLERELGETEKNKEAFLADFSQEDYDDIVNGWSAKL 299
           + E  +G  E N E    DF+ E+Y ++ N W  KL
Sbjct: 194 IKETVVGSDEFNAELAALDFNAEEYTELANEWREKL 229



to top

>TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine synthetase III)|
            [Includes: ATP-dependent asparagine adenylase (AsnA)
            (Asparagine activase); ATP-dependent glutamine adenylase
            (GlnA) (Glutamine activase); ATP-dependent tyrosine
            adenylase (TyrA) (Ty
          Length = 6486

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = -2

Query: 553  SPGTPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEK 374
            S G  + E A  +++RGY + D+  +    +D      +AE   D  +  L  E+GE   
Sbjct: 6316 SGGNLAFEVAKELEERGYGVTDIILFDSYWKDKAIERTVAETEND--IAQLFAEIGE--- 6370

Query: 373  NKEAFLADFSQEDY 332
            N E F  + +QED+
Sbjct: 6371 NTEMF--NMTQEDF 6382



to top

>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -2

Query: 556 RSPGTP--SEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGE 383
           +S G P  S +  +  K R     D K+ G+   D    D I E R  +  R  ERE+ E
Sbjct: 618 KSKGEPVISVKATSRSKDRSSKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRE 677

Query: 382 TEKNKE 365
           TE+ +E
Sbjct: 678 TERRRE 683



to top

>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase|
            CHD1)
          Length = 1468

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
 Frame = -2

Query: 532  EFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVI--AEDRTDQFLRVLERELGETEKNKEAF 359
            E +A +K    ++       K LED    DV+  AED       V   +LGE+    E F
Sbjct: 864  ELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDH------VTTPDLGESHLGGEEF 917

Query: 358  LADFSQEDY------DDIVNGWSAKLKRSSAGEQK 272
            L  F   DY      DDI+     +LK+    EQK
Sbjct: 918  LKQFEVTDYKADIDWDDIIP--EEELKKLQDEEQK 950



to top

>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2|
          Length = 953

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -2

Query: 556 RSPGTP--SEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHDVIAEDRTDQFLRVLERELGE 383
           +S G P  S +  +  K+R     D K+  K   D    D I E R  +  R  ERE+ E
Sbjct: 576 KSKGEPVISVKTTSRSKERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRE 635

Query: 382 TEKNKE 365
           TE+ +E
Sbjct: 636 TERRRE 641



to top

>KSGA_METKA (Q8TWU7) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 278

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -2

Query: 442 VIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVN 317
           VIA +   + + +L+RELGE   N E   ADF + D  D VN
Sbjct: 69  VIAVELDGRMVEILKRELGEA-PNLEIVRADFLEYDVPDDVN 109



to top

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = -2

Query: 478 YGKMLEDAGFHDVIAEDRTDQFLRVLERELGETEKNKEAFLADFSQEDYDDIVNG 314
           +GK L+      V +   +++ LRV+ +E+ ET++++   L D + +D  DI  G
Sbjct: 33  FGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDETKEDRWKGLYDNTSDDQQDIARG 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,827,937
Number of Sequences: 219361
Number of extensions: 1125206
Number of successful extensions: 4092
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4092
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top