ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37c13 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 150 bits (380), Expect = 2e-36 Identities = 69/129 (53%), Positives = 94/129 (72%) Frame = -2 Query: 578 DISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVA 399 D SY Y AE IL+SL RRA+ + D FN+ + CN EGAMY FPQI LP++A++ A Sbjct: 354 DESYAAYKAEKDGILQSLARRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPKKAIEAA 413 Query: 398 KSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFN 219 K+A K PD +Y L+LLE+TGI VPGSGFGQ G +H+R TILP E+ +PA+++ FK F+ Sbjct: 414 KAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVITRFKAFH 473 Query: 218 DSFMDQYQD 192 ++FM +Y+D Sbjct: 474 EAFMAEYRD 482
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 146 bits (369), Expect = 4e-35 Identities = 69/129 (53%), Positives = 89/129 (68%) Frame = -2 Query: 578 DISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVA 399 D SY Y AE IL SL RRA+ + FN + CN EGAMY FPQI LPQ+A++ A Sbjct: 354 DESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAA 413 Query: 398 KSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFN 219 K+A K PD +Y L+LLE+TGI VPGSGFGQ G +H R TILP E+ +PA++S F F+ Sbjct: 414 KAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFH 473 Query: 218 DSFMDQYQD 192 ++FM +Y+D Sbjct: 474 EAFMSEYRD 482
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 121 bits (303), Expect = 2e-27 Identities = 54/127 (42%), Positives = 83/127 (65%) Frame = -2 Query: 578 DISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVA 399 D S+ ++ AE +++L L +A++ FN + CN +GAMYSFP+++LP RA++ A Sbjct: 368 DPSFAQFQAEKQAVLAELAAKAKLTEQVFNEAPGISCNPVQGAMYSFPRVQLPPRAVERA 427 Query: 398 KSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFN 219 + G PD+++CL+LLE TGI VPGSGFGQ+EG +H R TILP E + ++ +F+ Sbjct: 428 QELGLAPDMFFCLRLLEETGICVVPGSGFGQREGTYHFRMTILPPLEKLRLLLEKLSRFH 487 Query: 218 DSFMDQY 198 F +Y Sbjct: 488 AKFTLEY 494
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 117 bits (293), Expect = 2e-26 Identities = 54/125 (43%), Positives = 79/125 (63%) Frame = -2 Query: 572 SYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKS 393 S+ ++ AE + +L L +A++ FN + CN +GAMYSFPQI+LP +A+ A+ Sbjct: 370 SFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQIQLPLKAVQRAQD 429 Query: 392 AGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDS 213 G PD+++CL LLE TGI VPGSGFGQ+EG +H R TILP E + ++ + F+ Sbjct: 430 LGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRVLLEKLRHFHAK 489 Query: 212 FMDQY 198 F +Y Sbjct: 490 FTHEY 494
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 115 bits (289), Expect = 7e-26 Identities = 53/125 (42%), Positives = 78/125 (62%) Frame = -2 Query: 572 SYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKS 393 S+ ++ AE + +L L +A++ FN + CN +GAMYSFPQ++LP +A+ A+ Sbjct: 370 SFKQFQAERQEVLAELAAKAKLTEQVFNEAPGIRCNPVQGAMYSFPQVQLPLKAVQRAQE 429 Query: 392 AGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDS 213 G PD+++CL LLE TGI VPGSGFGQ+EG +H R TILP E + ++ F+ Sbjct: 430 LGLAPDMFFCLCLLEETGICVVPGSGFGQQEGTYHFRMTILPPMEKLRLLLEKLSHFHAK 489 Query: 212 FMDQY 198 F +Y Sbjct: 490 FTHEY 494
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 107 bits (268), Expect = 2e-23 Identities = 57/127 (44%), Positives = 76/127 (59%) Frame = -2 Query: 572 SYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKS 393 S+ AE SI E L RA + + FNS + C +GAMY FP+I LP +A+ A+ Sbjct: 469 SFESDQAERNSIHEKLITRAMTLYETFNSLEGIECQKPQGAMYLFPKIDLPFKAVQEARH 528 Query: 392 AGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDS 213 PD +YC KLLE+TGI TVPGSGFGQ+ G +HLRTT L + + ++ F+ Sbjct: 529 LELTPDEFYCKKLLESTGICTVPGSGFGQEPGTYHLRTTFLAPGLEW---IKKWESFHKE 585 Query: 212 FMDQYQD 192 F DQY+D Sbjct: 586 FFDQYRD 592
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 101 bits (252), Expect = 1e-21 Identities = 50/129 (38%), Positives = 76/129 (58%) Frame = -2 Query: 578 DISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVA 399 D SY + E I +R RA ++ + F + C +GAMY FP++ LP++A+ + Sbjct: 382 DESYEQDHDERLKIFHEMRTRANLLYETFKELEGIECQKPQGAMYLFPRLVLPKKALCES 441 Query: 398 KSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFN 219 + G EPD +YC LLE+TGI TVPGSGFGQ+ G +H+RTT L + +K+F+ Sbjct: 442 ERLGIEPDEFYCTSLLESTGICTVPGSGFGQRPGTYHVRTTFLAPGTKW---IQDWKEFH 498 Query: 218 DSFMDQYQD 192 F +Y++ Sbjct: 499 QDFFSKYRN 507
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 85.1 bits (209), Expect = 1e-16 Identities = 46/128 (35%), Positives = 71/128 (55%) Frame = -2 Query: 578 DISYLKYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVA 399 D SY + E I E+LR + + + +G + V C GAMY P + LP++ + A Sbjct: 381 DPSYDLFIKEVDEIHEALRLQCRQLYEGTKRMKRVSCLEPHGAMYLHPSVSLPEKLITTA 440 Query: 398 KSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFN 219 K+ +PD +Y ++LL+ +GI VPGSGFGQ EG +H+R T L + + F K + Sbjct: 441 KAQKIQPDEFYAIELLKRSGICVVPGSGFGQPEGDYHIRITFLAKGTE---YIERFVKAH 497 Query: 218 DSFMDQYQ 195 + MD Y+ Sbjct: 498 NEIMDLYE 505
>AATB2_RHIME (Q06191) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 46.6 bits (109), Expect = 5e-05 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Frame = -2 Query: 545 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDV 372 K ES +RR ++ +G N+ + C EGA Y+F R + +GK E D Sbjct: 302 KERTESFQRRRNLVVNGLNAIEGLDCRVPEGAFYTFSGCAGVARRV---TPSGKRIESDT 358 Query: 371 YYCLKLLEATGISTVPGSGFG 309 +C LLE + ++ VPGS FG Sbjct: 359 DFCAYLLEDSHVAVVPGSAFG 379
>AAT_SULTO (Q972A2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 399 Score = 45.8 bits (107), Expect = 9e-05 Identities = 30/115 (26%), Positives = 54/115 (46%) Frame = -2 Query: 551 ESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDV 372 E K ++ ++R IM + + + + ++GA Y FP I ++ K A Sbjct: 290 EVKEMISLFKKRRDIMYEELKKIKGIQVHKSQGAFYMFPFIG------EILKKANLSVKD 343 Query: 371 YYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 207 + LKL+E G++T+PG F + G +R + E+D+ + K+F D M Sbjct: 344 F-SLKLIEEKGVTTIPGEVFPLEVGKDFVRLSFAVKEDDIREGIKRMKEFIDMLM 397
>AATB1_RHIME (P58350) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 43.5 bits (101), Expect = 4e-04 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -2 Query: 545 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDV 372 K ES +RR ++ +G N+ + C EGA Y+F + +GK + D Sbjct: 302 KERTESFQRRRDLVVNGLNAIDGLDCRVPEGAFYTFSGC---AGVLGKVTPSGKRIKTDT 358 Query: 371 YYCLKLLEATGISTVPGSGFG 309 +C LLE ++ VPGS FG Sbjct: 359 DFCAYLLEDAHVAVVPGSAFG 379
>AAT_RHILP (O86459) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 400 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = -2 Query: 551 ESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EP 378 E+K I E R ++ N + +VC EGA Y +P + + +GK E Sbjct: 293 ENKKIFEG---RRDLVVSMLNQAKGIVCPVPEGAFYVYPSCK---GLIGKTAPSGKVIET 346 Query: 377 DVYYCLKLLEATGISTVPGSGFG 309 D + +LLE+ G++ V GS FG Sbjct: 347 DEDFVSELLESEGVAVVHGSAFG 369
>AAT_BACST (Q59228) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 38.1 bits (87), Expect = 0.018 Identities = 28/92 (30%), Positives = 38/92 (41%) Frame = -2 Query: 533 ESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKL 354 ++ +R I+ D C +GA Y FP R + A AG + L Sbjct: 294 QAFEQRLNIIYDKLVQIPGFTCVKPQGAFYLFPNAR------EAAAMAGCRTVDEFVAAL 347 Query: 353 LEATGISTVPGSGFGQKEGVFHLRTTILPAEE 258 LE ++ VPGSGFG + V T L A E Sbjct: 348 LEEAKVALVPGSGFGAPDNVRLSYATSLDALE 379
>AAT1_BACSU (P53001) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 37.4 bits (85), Expect = 0.031 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = -2 Query: 470 CNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGV 294 C EGA Y FP A + A+S G + + LLE ++ VPGSGFG E V Sbjct: 315 CVKPEGAFYLFPN------AKEAAQSCGFKDVDEFVKALLEEEKVAIVPGSGFGSPENV 367
>AAT_STRVG (Q60013) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 397 Score = 37.4 bits (85), Expect = 0.031 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEP--DVYYCLKLLE 348 RR Q M N V C EGA Y++P + + + + GK P V +L+ Sbjct: 297 RRRQTMVKMLNEIDGVFCPTPEGAFYAYPSV----KELLGKEIRGKRPQSSVELAALILD 352 Query: 347 ATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKK 225 ++ VPG FG +LR + +ED+ +S +K Sbjct: 353 EVEVAVVPGEAFGTPG---YLRLSYALGDEDLVEGVSRIQK 390
>AAT_SYNY3 (Q55128) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 389 Score = 36.6 bits (83), Expect = 0.053 Identities = 20/84 (23%), Positives = 43/84 (51%) Frame = -2 Query: 545 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYY 366 ++++++ R Q++ +G N + C +GA Y F +D+AK+ + + Sbjct: 291 ETMVKAFTERRQVIVEGINQIAGLSCPNPKGAFYVF---------VDIAKTGLNSLE--F 339 Query: 365 CLKLLEATGISTVPGSGFGQKEGV 294 +LLE+ ++ +PG+ FG + V Sbjct: 340 SARLLESHQVAVIPGAAFGADDCV 363
>AATA_RHIME (Q02635) Aspartate aminotransferase A (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 35.0 bits (79), Expect = 0.16 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = -2 Query: 533 ESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSA--GK--EPDVYY 366 E + R ++ N + + C EGA Y +P A + K+A GK E D + Sbjct: 296 EIFQGRRDLVVSMLNQAKGISCPTPEGAFYVYPSC-----AGLIGKTAPSGKVIETDEDF 350 Query: 365 CLKLLEATGISTVPGSGFG 309 +LLE G++ V GS FG Sbjct: 351 VSELLETEGVAVVHGSAFG 369
>AAT_SULAC (Q4J8X2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/113 (18%), Positives = 49/113 (43%) Frame = -2 Query: 545 KSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYY 366 K ++++ ++R +M + + N ++GA Y FP + ++ + +G + Sbjct: 293 KKMIDTFKKRRDVMYSELKKIKGIQVNKSQGAFYMFPYLG------EILRKSGMSTK-DF 345 Query: 365 CLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 207 + L++ G+ T+PG F G +R + E + + +F + M Sbjct: 346 SVNLIKEKGVVTIPGEVFPLDAGKEFVRLSFAVDENVIKEGVQRMSEFINQLM 398
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = -1 Query: 372 LLLPQASGSHWNIHCSRLRFWSERRGVPSEDNDPA 268 +L P +SGSH I S L SE +PSED DPA Sbjct: 20 ILDPGSSGSHVEISESSLESDSEADSLPSEDLDPA 54
>AAT_MYCTU (P63498) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 1.7 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -2 Query: 491 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 312 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 311 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 210 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>AAT_MYCBO (P63499) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 1.7 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -2 Query: 491 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 312 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 311 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 210 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>YARA_PROST (P46117) Putative HTH-type transcriptional regulator in aarA| 3'region Length = 282 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -2 Query: 389 GKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILP 267 G PD+ + LKL G ST+ + FGQ E V L +LP Sbjct: 190 GNTPDINHMLKLANKKGCSTIVLTRFGQDEAV-RLADLVLP 229
>THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC| Length = 619 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -2 Query: 437 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 258 PQIR+P R + V +AG+ P + Y + +G T P ++G+ LR + A Sbjct: 35 PQIRVPMREISVHPTAGEPPVIVY-----DPSGPYTDPTVETSIEKGLARLRHEWITARG 89 Query: 257 DMPA 246 D+ A Sbjct: 90 DVEA 93
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 208 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 339 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 1369 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 1413 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 208 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 339 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 917 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 961 Score = 29.6 bits (65), Expect = 6.5 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 259 SSAGRIVVLRWNTPSF*PKPEPGTVDI 339 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>YDT4_SCHPO (O14209) Hypothetical aminotransferase C6B12.04c (EC 2.6.1.-)| Length = 421 Score = 30.0 bits (66), Expect = 5.0 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 7/124 (5%) Frame = -2 Query: 560 YSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYS---FPQIRLPQRAMDVAKSA 390 Y E KS S ++R +I+ F+ + +G+ Y+ F +++LP+ + A Sbjct: 302 YYEEYKS---SYKKRFEILAKAFDQLE-IPYTIPDGSYYTMANFSKLKLPKDYPFPEEIA 357 Query: 389 GKEPDVYYCLKLLEATGISTVPGSGFGQKEGV----FHLRTTILPAEEDMPAIMSSFKKF 222 + D C +L+ G++T+P + F E +LR E + +K Sbjct: 358 NRPRDFKLCYWILKEIGVATIPPTEFYTDEDAPVAENYLRFAFCKTFETLEEAARRLQKL 417 Query: 221 NDSF 210 D F Sbjct: 418 KDYF 421
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 29.6 bits (65), Expect = 6.5 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 259 SSAGRIVVLRWNTPSF*PKPEPGTVDI 339 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>NUOL_CAMJE (Q9PMA7) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH| dehydrogenase I, chain L) (NDH-1, chain L) Length = 596 Score = 29.6 bits (65), Expect = 6.5 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 35 ISPLYISSIATSFLHHSYSSQLINQLQLLVEKSSIILIC 151 +SPL + +I F HS+ L +L + ++ I++IC Sbjct: 446 MSPLMVLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMIC 484
>FAS_HUMAN (P49327) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.6 bits (65), Expect = 6.5 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +1 Query: 448 IAPSVKLQTTLRQLLKPSVIICALLLKDSRIDL 546 IAP LQ L++ LKPS I L+ KD R +L Sbjct: 761 IAPHALLQAVLKRGLKPSCTIIPLMKKDHRDNL 793
>FAS_CHICK (P12276) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 Query: 448 IAPSVKLQTTLRQLLKPSVIICALLLKDSRIDL 546 IAP LQ LR+ LKP+ I L+ KD + +L Sbjct: 759 IAPHALLQAILRRTLKPTCTILPLMKKDHKNNL 791
>ATTY_TRYCR (P33447) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 416 Score = 29.3 bits (64), Expect = 8.5 Identities = 23/88 (26%), Positives = 35/88 (39%) Frame = -2 Query: 539 ILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCL 360 I+ + A + + C + GAMY +I D+ K + DV + Sbjct: 314 IVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI-------DLEKYRDIKTDVEFFE 366 Query: 359 KLLEATGISTVPGSGFGQKEGVFHLRTT 276 KLLE + +PG+ F G L TT Sbjct: 367 KLLEEENVQVLPGTIF-HAPGFTRLTTT 393
>POL_HV1Y2 (P35963) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix| protein p17 (MA); Capsid protein p24 (CA); p2 spacer peptide; Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6 pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse trans Length = 1434 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -2 Query: 563 KYSAESKSILESLRRRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK 384 K+S+E +RR Q+ NS + +SFPQI L QR + K G+ Sbjct: 446 KFSSEQTRANSPIRRERQVWRRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQ 505 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,914,370 Number of Sequences: 219361 Number of extensions: 1800899 Number of successful extensions: 5038 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5031 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
