>UVRA_CLOPE (Q8XNI5) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 939

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -3

Query: 297 DVMILVSIVQPLLEEINAILV-KHQLDMLKC 208
           DV  LV I+Q L++  N ++V +H LDM+KC
Sbjct: 866 DVNRLVKILQRLVDGGNTVIVIEHNLDMIKC 896

>VGLH_MEHV1 (P36337) Glycoprotein H precursor|
          Length = 808

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
 Frame = +1

Query: 70  GTNHQQFLKETPTNLHFTMQARLIR-----LCSTVVDMYNHQVIGHPCVSGAFEHVQLVF 234
           G +   F K+  T  HF +    I+     L  +++      + GH     A +H+ L+ 
Sbjct: 363 GISSAAFRKDAST--HFLISGTPIKDSKADLIKSLLSKVIRPISGHTRPLSAIQHLFLLR 420

Query: 235 NQNGIDLL*QRLYNGDQYHDISSKILRILAAPHQQLNKDLSFWNET 372
           +   +D+  Q   NG     +S+  L  +   H +  +D+  WN T
Sbjct: 421 SAYALDIPRQ---NGSLSEQVSTVALSFIENIHSEAMRDILSWNTT 463

>TRMU_LACAC (Q5FKU0) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 375

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 292 HDIGLHCTASARGDQCHFG*TPAGHA 215
           HD  +HCTA  R  QC  G T   HA
Sbjct: 301 HDFEMHCTAKFRYRQCDIGVTVKYHA 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,524,740
Number of Sequences: 219361
Number of extensions: 1504937
Number of successful extensions: 3013
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3013
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)