>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)|
            (Protein GYMNOS)
          Length = 1384

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
 Frame = -1

Query: 644  STQEVQVNPTSLSQYRDIQRKIVEFIRKRYHILEKCLDIEYAV----IKTKTPVPDDLTE 477
            S    QVN  S+  YRD+QR++VEF++KR  +LEK ++ EYA     +   + +P +  E
Sbjct: 1153 SADGAQVN--SMFYYRDMQRRLVEFVKKRVLLLEKAMNYEYAEEYYGLGGSSSIPTEEPE 1210

Query: 476  QNVPMGHSPAVPDI---SEVLRELPPLVPI 396
                +  +  V  I    E+L  LP   PI
Sbjct: 1211 AEPKIADTVGVSFIEVDDEMLDGLPKTDPI 1240

>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
          Length = 1120

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
 Frame = -2

Query: 421 ENFPLLYQSMCGVLEDSGARALNSFCGDKAASASLANSLHQFEKVCEDVDRVLRVQENGA 242
           E FP  +     V EDS    LN F G      +   +L +FE + E+V R         
Sbjct: 65  EGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAVAQNT 124

Query: 241 ATPKEEVVDA--IVEEAKPPQVPPQDAGAVAANGVG 140
           A  K+   DA     EA        D+   A+   G
Sbjct: 125 AAAKKSASDASTSAREAATHAADAADSARAASTSAG 160

>HSP7F_CANGA (Q6FJI3) Heat shock protein homolog SSE1|
          Length = 694

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 554 HILEKCLDIEYAVIKTKTPVPDDLTEQNVPMGHSPAVPDISEVLR 420
           HI+E+   +E  V+K + P+P+D  E         AVP++ EV +
Sbjct: 490 HIIEEAYSLEDIVVKEEVPLPEDAPED--------AVPEVKEVTK 526

>APOA_HUMAN (P08519) Apolipoprotein(a) precursor (EC 3.4.21.-) (Apo(a)) (Lp(a))|
          Length = 4548

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 569  IRKRYHILEKCLDIEYAVIKTKTPVPDDLTE---QNVPMGHSPAVPD 438
            +R  Y  L +CL  E +V+ T T VPD  TE   +  P   SP V D
Sbjct: 3629 VRWEYCNLTQCLVTESSVLATLTVVPDPSTEASSEEAPTEQSPGVQD 3675

>RGNEF_MOUSE (P97433) Rho-guanine nucleotide exchange factor (Rho-interacting|
           protein 2) (RhoGEF) (RIP2)
          Length = 1693

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = -2

Query: 250 NGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGPSTVKPEDKMEIDG*CVGMKTES 71
           +GAA  +EEV +  +E  + P    +DA ++ +   GPS  + +D++ +D    G+K   
Sbjct: 295 SGAAETEEEVRN--LESGRSPSEEEEDAKSIKSQVDGPSEHEDQDRLALDRSFDGLKKSK 352

Query: 70  KPPS 59
             P+
Sbjct: 353 HVPA 356

>EVX1_HUMAN (P49640) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 407

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = -2

Query: 256 QENGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGP 137
           +E G   P+EE VD +   A  P   PQ AGA A  G GP
Sbjct: 58  RERGGGGPEEEPVDGLAGSAAGPGAEPQVAGA-AMLGPGP 96

>SRS1_ORYSA (P83649) Salt-stress root protein RS1|
          Length = 204

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = -2

Query: 253 ENGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGPSTVKPEDKME 107
           E  A T   EV  A+ EE K  +  P +  A AA    PST   E+K E
Sbjct: 141 EAAAETTSREV--AVEEEKKEEEAAPAEPAAAAAEAAAPSTEVVEEKKE 187

>TNNT_DROME (P19351) Troponin T, skeletal muscle (Protein upheld) (Protein|
           intended thorax)
          Length = 397

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 253 ENGAATPKEEVVDAIVEEAKPPQVPPQDAGAVAANGVGPSTVKPEDKMEID 101
           E   ++ +EEVV+   EE KPPQ P +  G        P  +K +D+   D
Sbjct: 5   EEYTSSEEEEVVEETREETKPPQTPAEGEG-------DPEFIKRQDQKRSD 48

>APOA_MACMU (P14417) Apolipoprotein(a) (EC 3.4.21.-) (Apo(a)) (Lp(a))|
           (Fragment)
          Length = 1420

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -1

Query: 569 IRKRYHILEKCLDIEYAVIKTKTPVPDDLTE---QNVPMGHSPAVPD 438
           +R  Y  L +CL  E +V++T T VPD  T+   +  P   SP V D
Sbjct: 573 VRWEYCNLTQCLVTESSVLETLTVVPDPSTQASSEEAPTEQSPEVQD 619

>MUCB1_XENLA (P38565) Integumentary mucin B.1 (FIM-B.1) (Fragment)|
          Length = 398

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 503 TPVPDDLTEQNVPMGHSPAVPDISEVLRELPPLV 402
           TP P + T  +VP G S   P  +  LR +PP V
Sbjct: 69  TPAPSETTVPSVPSGESTPAPSETTELRIIPPEV 102

>PACN3_HUMAN (Q9UKS6) Protein kinase C and casein kinase substrate in neurons|
           protein 3 (SH3 domain-containing protein 6511)
           (Endophilin I)
          Length = 424

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 319 LANSLHQFEKVCEDVDRVLRVQENGAATPKEEVVDAIVEEAKPPQVPPQDAGA 161
           +A +  QFE+   D  R +  +E G  +P E  + +IV        PPQ  G+
Sbjct: 292 MAMNWPQFEEWSLDTQRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPPQSPGS 344

>MURG_COXBU (Q820X3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 358

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = -2

Query: 382 LEDSGARALNSFCGDKAASASLANSLHQFEKVCEDVDRVLRVQENGAATPKEEVVDAIVE 203
           LE +GA  + S       S +  + +  FE+  +D DR+L + EN     K E V  ++ 
Sbjct: 295 LEQAGAAIIIS-----EESLTETDLMRWFEQFAQDRDRLLTMAENARKLAKPEAVQRVIA 349

Query: 202 EAK 194
           + K
Sbjct: 350 QCK 352

>GDIT_MOUSE (Q62160) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI|
           gamma) (Rho-GDI2)
          Length = 225

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 271 RVLRVQENGAATPKEEVVDAIVEEAKPP 188
           RVL   ++G +TP +EV+D IV E + P
Sbjct: 24  RVLLADKDGESTPSDEVLDEIVPEYQAP 51

>IF2_LEPIC (Q72NX3) Translation initiation factor IF-2|
          Length = 891

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -2

Query: 244 AATPKEEVVDAIVEEAKPPQVP---PQDAGAVAANGVGPSTVKPEDKMEIDG 98
           AA+PK+E V      +KPP +P   P D+G        PS+  P  + E  G
Sbjct: 56  AASPKKETVAESAPSSKPPVMPLPLPGDSGQSPIVRPAPSSHSPAKREESPG 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,260,075
Number of Sequences: 219361
Number of extensions: 1938674
Number of successful extensions: 6756
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6748
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)