>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                      
Query: 115    caatcaactacacaaaattagccacaattaacggcaagtaacaggaccgcctcaca 170
              |||||||||||| ||| |||||||||||||||||||| ||||| | || |||||||
Sbjct: 126412 caatcaactacagaaatttagccacaattaacggcaactaacacgtcctcctcaca 126467



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 115   caatcaactacacaaaattagccacaattaacggcaagtaacaggaccgcctcaca 170
             |||||||||||| ||| |||||||||||||||||||| ||||| | || |||||||
Sbjct: 86699 caatcaactacagaaatttagccacaattaacggcaactaacacgtcctcctcaca 86754



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 230    ccgcccaccctgtcctgcaccatcgcc 256
              |||||| ||||||||||||||||||||
Sbjct: 126481 ccgcccgccctgtcctgcaccatcgcc 126507



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 230   ccgcccaccctgtcctgcaccatcgcc 256
             |||||| ||||||||||||||||||||
Sbjct: 86768 ccgcccgccctgtcctgcaccatcgcc 86794

>emb|AL035699.4|HS73H22 Human DNA sequence from clone RP1-73H22 on chromosome 6q23 Contains the
             TBPL1 gene for TBP-like 1, the 3' part of the SLC2A12 gene
             for solute carrier family 2 (facilitated glucose
             transporter) member 12 and one CpG island, complete
             sequence
          Length = 104824

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 120   aactacacaaaattagccacaattaa 145
             ||||||||||||| ||||||||||||
Sbjct: 21549 aactacacaaaataagccacaattaa 21574

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 92      caaaaaggaaaaattggtaaaggcaa 117
               |||||||||||||||||||| |||||
Sbjct: 4490796 caaaaaggaaaaattggtaatggcaa 4490821

>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1297_C09
          Length = 163378

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 92    caaaaaggaaaaattggtaaaggcaa 117
             |||||||||||||||||||| |||||
Sbjct: 26175 caaaaaggaaaaattggtaatggcaa 26200

>gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome 14, complete sequence
          Length = 235368

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 108    gtaaaggcaatcaactacacaaaat 132
              ||||| |||||||||||||||||||
Sbjct: 145681 gtaaaagcaatcaactacacaaaat 145657

>gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome 14, complete sequence
          Length = 211932

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 108   gtaaaggcaatcaactacacaaaat 132
             ||||| |||||||||||||||||||
Sbjct: 37335 gtaaaagcaatcaactacacaaaat 37359

>gb|AC123831.4| Mus musculus BAC clone RP24-125K16 from chromosome 14, complete sequence
          Length = 181266

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 108    gtaaaggcaatcaactacacaaaat 132
              ||||| |||||||||||||||||||
Sbjct: 106822 gtaaaagcaatcaactacacaaaat 106798

>emb|AL031585.2|HS227L5 Human DNA sequence from clone RP6-227L5 on chromosome Xp11.22-11.3
             Contains a novel pseudogene and a pseudogene similar to
             part of keratin 18 (K18, CYK18) (KRT18), complete sequence
          Length = 85304

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 336   cagttccatcccagttgatcttgatgcct 364
             |||| |||||||||||||||||| |||||
Sbjct: 27705 cagtaccatcccagttgatcttgctgcct 27733

>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence
          Length = 113964

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   acaaaattagccacaattaa 145
             ||||||||||||||||||||
Sbjct: 69531 acaaaattagccacaattaa 69512

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      atcggccttggagttgccct 41
               ||||||||||||||||||||
Sbjct: 1534428 atcggccttggagttgccct 1534447

>emb|AL356491.12| Human DNA sequence from clone RP11-310C13 on chromosome 9 Contains
            part of a novel gene, complete sequence
          Length = 60350

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gttgatcttgatgcctttct 368
            ||||||||||||||||||||
Sbjct: 3080 gttgatcttgatgcctttct 3099

>emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chromosome 1q42.2-43
             Contains the 5' end of the TARBP1 gene for TAR (HIV) RNA
             binding protein 1 and a CpG island, complete sequence
          Length = 104632

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   ttttcttcccaggcaagact 579
             ||||||||||||||||||||
Sbjct: 89687 ttttcttcccaggcaagact 89668

>gb|AC110772.3| Homo sapiens BAC clone RP11-217E13 from 4, complete sequence
          Length = 192046

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    ttcctgccttttcccacccg 215
              ||||||||||||||||||||
Sbjct: 188071 ttcctgccttttcccacccg 188052

>gb|AC112173.3| Homo sapiens chromosome 5 clone CTD-2275D10, complete sequence
          Length = 125551

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 94     aaaaggaaaaattggtaaaggcaa 117
              |||||||||||| |||||||||||
Sbjct: 109556 aaaaggaaaaataggtaaaggcaa 109533

>gb|AE012230.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 138
            of 460 of the complete genome
          Length = 10813

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  tgtcctgcaccatcgccgcc 259
            ||||||||||||||||||||
Sbjct: 3358 tgtcctgcaccatcgccgcc 3377

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     tgtcctgcaccatcgccgcc 259
               ||||||||||||||||||||
Sbjct: 3516500 tgtcctgcaccatcgccgcc 3516481

>gb|AC064843.5| Homo sapiens BAC clone RP11-12I17 from 2, complete sequence
          Length = 66898

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tctatcttcctgccttttcc 209
             ||||||||||||||||||||
Sbjct: 25528 tctatcttcctgccttttcc 25547

>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete
             sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    ccaccaccccgcaaaaaggaaaaa 104
             |||||||||| |||||||||||||
Sbjct: 54575 ccaccaccccccaaaaaggaaaaa 54598


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,328,016
Number of Sequences: 3902068
Number of extensions: 5328016
Number of successful extensions: 103318
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103170
Number of HSP's gapped (non-prelim): 148
length of query: 656
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 633
effective length of database: 17,143,297,704
effective search space: 10851707446632
effective search space used: 10851707446632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)