| Clone Name | rbaal36n01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | NRCAM_RAT (P97686) Neuronal cell adhesion molecule precursor (Nr... | 29 | 3.4 | 2 | NRCAM_MOUSE (Q810U4) Neuronal cell adhesion molecule precursor (... | 29 | 3.4 | 3 | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast ... | 29 | 3.4 | 4 | CYB_ASTPE (Q33818) Cytochrome b | 28 | 4.5 | 5 | CYB_PELMA (O79217) Cytochrome b | 28 | 5.9 | 6 | CYB_MELGA (P50663) Cytochrome b | 28 | 5.9 | 7 | CYB_FRAFR (O20644) Cytochrome b | 28 | 5.9 | 8 | CYB_CYACH (P92599) Cytochrome b | 28 | 5.9 | 9 | G6PI_GEOSL (Q74DK5) Glucose-6-phosphate isomerase (EC 5.3.1.9) (... | 28 | 7.7 | 10 | CYB_PARLI (P12778) Cytochrome b | 28 | 7.7 | 11 | CYB_BRALA (P92472) Cytochrome b | 28 | 7.7 | 12 | CYB_BRAFL (O47431) Cytochrome b | 28 | 7.7 | 13 | O1102_MOUSE (Q8VES2) Olfactory receptor 1102 (Olfactory receptor... | 28 | 7.7 |
|---|
>NRCAM_RAT (P97686) Neuronal cell adhesion molecule precursor (Nr-CAM)| (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (rBravo) (Ankyrin-binding cell adhesion molecule NrCAM) Length = 1214 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 74 VKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYHASFCLVR 229 + VA + STGT C++R KL K + HL + P R I + +V+ Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAK-----NEVHLEIKDPTRFIKQPGYAVVQ 558
>NRCAM_MOUSE (Q810U4) Neuronal cell adhesion molecule precursor (Nr-CAM)| (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (mBravo) Length = 1256 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 74 VKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYHASFCLVR 229 + VA + STGT C++R KL K + HL + P R I + +V+ Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAK-----NEVHLEIKDPTRIIKQPEYAVVQ 552
>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) (ALDP) Length = 388 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -2 Query: 305 EAKEGMFVKNYSY 267 EAKEGMFVKNY Y Sbjct: 376 EAKEGMFVKNYVY 388
>CYB_ASTPE (Q33818) Cytochrome b| Length = 379 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = -1 Query: 123 LDMHFT--VPVDYSKATFTCVIHGFAWLLQNLHVRT 22 L MH+T V + +S + C + WLL+N+H T Sbjct: 52 LAMHYTSDVSLAFSSVSHICRDVNYGWLLRNIHANT 87
>CYB_PELMA (O79217) Cytochrome b| Length = 380 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -1 Query: 123 LDMHFTVPVD--YSKATFTCVIHGFAWLLQNLH 31 L MH+T +S T TC + WL++NLH Sbjct: 52 LAMHYTADTTLAFSSVTHTCRNVQYGWLIRNLH 84
>CYB_MELGA (P50663) Cytochrome b| Length = 380 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -1 Query: 123 LDMHFTVPVD--YSKATFTCVIHGFAWLLQNLH 31 L MH+T +S +TC + WLL NLH Sbjct: 52 LAMHYTADTTLAFSSVAYTCRNVQYGWLLHNLH 84
>CYB_FRAFR (O20644) Cytochrome b| Length = 380 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -1 Query: 123 LDMHFTVPVD--YSKATFTCVIHGFAWLLQNLH 31 L MH+T +S +TC + WL++NLH Sbjct: 52 LAMHYTADTSLAFSSVAYTCRNVQYGWLIRNLH 84
>CYB_CYACH (P92599) Cytochrome b| Length = 380 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Frame = -1 Query: 123 LDMHFTVPVDYSKATFTCVIH-----GFAWLLQNLH 31 L MH+T Y+ FT V H F WL++NLH Sbjct: 52 LAMHYTADTSYA---FTSVAHMCRNVQFGWLIRNLH 84
>G6PI_GEOSL (Q74DK5) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 529 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +3 Query: 90 NNLLEQ*SAYREAN*RVKKDLENTVIIISGSGSQLDR 200 N +LE +AYR A D + ++G+GS+LDR Sbjct: 187 NGMLEAEAAYRRAG----LDFSRHAVAVTGAGSELDR 219
>CYB_PARLI (P12778) Cytochrome b| Length = 380 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = -1 Query: 123 LDMHFTVPVD--YSKATFTCVIHGFAWLLQNLH 31 L MH+T + +S A+ C + WLL+N+H Sbjct: 52 LAMHYTADISLAFSSASHICRDVNYGWLLRNVH 84
>CYB_BRALA (P92472) Cytochrome b| Length = 380 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -1 Query: 123 LDMHFTVPVD--YSKATFTCVIHGFAWLLQNLH 31 L MH+T V+ +S C + WLL+NLH Sbjct: 52 LAMHYTADVNLAFSSVAHICRDVNYGWLLRNLH 84
>CYB_BRAFL (O47431) Cytochrome b| Length = 380 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -1 Query: 123 LDMHFTVPVD--YSKATFTCVIHGFAWLLQNLH 31 L MH+T V+ +S C + WLL+NLH Sbjct: 52 LAMHYTADVNLAFSSVAHICRDVNYGWLLRNLH 84
>O1102_MOUSE (Q8VES2) Olfactory receptor 1102 (Olfactory receptor 179-4)| Length = 324 Score = 27.7 bits (60), Expect = 7.7 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +3 Query: 135 RVKKDLENTVIIISGSGSQLDRYIMHLSAW*GTYVVVLIGMVRLIAVVFDEHAL 296 +V E TV I+ G +D I + YVV LIG + L+ +V ++ L Sbjct: 14 QVNNVTEITVFILLGFTDDVDMNIFLFILFLAIYVVTLIGNLGLVVLVIEDSRL 67 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,398,063 Number of Sequences: 219361 Number of extensions: 620897 Number of successful extensions: 1923 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1902 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1923 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)