| Clone Name | rbaal36m22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | IF4E5_CAEEL (P56570) Eukaryotic translation initiation factor 4E... | 30 | 2.4 | 2 | CREG1_MOUSE (O88668) CREG1 protein precursor (Cellular repressor... | 29 | 5.4 |
|---|
>IF4E5_CAEEL (P56570) Eukaryotic translation initiation factor 4E-5 (eIF4E-5)| (eIF-4E-5) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) Length = 240 Score = 30.4 bits (67), Expect = 2.4 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Frame = -3 Query: 223 LADFPLARXX*KVKLKVMEAWRSGRDLLCAIRAREYNCLMGI-----VRALEQKYNCLME 59 L D+ + R + K + E W GR L+ + + L + + + +++ ME Sbjct: 99 LCDYNVFRDDIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDME 158 Query: 58 SICVTVCNIRYQ 23 SIC VCN+R Q Sbjct: 159 SICGLVCNVRGQ 170
>CREG1_MOUSE (O88668) CREG1 protein precursor (Cellular repressor of| E1A-stimulated genes 1) Length = 220 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +2 Query: 218 RQTRAKLLAQTSSALFISPVDTEGFLSSGDWGRIVIDFRPQATPPR 355 R A LLA AL +SP G GDW +D R PPR Sbjct: 10 RSLLAALLAPALVALLVSPASGRGGRDHGDWD---VDRRLPPLPPR 52 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,413,900 Number of Sequences: 219361 Number of extensions: 1433255 Number of successful extensions: 3555 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3552 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)