ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37b17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1METX_CHRVO (Q7NZY3) Homoserine O-acetyltransferase (EC 2.3.1.31)... 33 0.63
2SAT1_MESAU (Q01612) Diamine acetyltransferase 1 (EC 2.3.1.57) (S... 30 5.3
3OFUT1_CAEEL (Q18014) Putative GDP-fucose protein O-fucosyltransf... 30 5.3
4METX_ACIAD (Q6FEQ3) Homoserine O-acetyltransferase (EC 2.3.1.31)... 30 5.3
5CAPSD_PCV2 (O56129) Capsid protein 30 6.9

>METX_CHRVO (Q7NZY3) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 380

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 576 DQGACLVLCHLASGHSTARGHTRGDDKTIG 665
           D+   +++CH  SGH    G+ R DDKT G
Sbjct: 46  DKSNAILICHALSGHHHVAGYYRADDKTPG 75



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>SAT1_MESAU (Q01612) Diamine acetyltransferase 1 (EC 2.3.1.57)|
           (Spermidine/spermine N(1)-acetyltransferase 1) (SSAT)
           (SSAT-1) (Putrescine acetyltransferase) (Polyamine
           N-acetyltransferase 1)
          Length = 171

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 30  HFTXPKWXQPSLHVIHRRVVSSLYKNKTWRV 122
           HF   +W +PS++   RR  S L   + WR+
Sbjct: 126 HFLVAEWNEPSINFYKRRAASDLSSEEGWRL 156



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>OFUT1_CAEEL (Q18014) Putative GDP-fucose protein O-fucosyltransferase 1|
           precursor (EC 2.4.1.221) (Peptide-O-fucosyltransferase)
           (O-FucT-1)
          Length = 389

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 273 PPPDHQIASWSGSPCPAPSIKSIYSNHQR*EKKFLKWSSSAR*DHKVLLAAYAATP 440
           P  ++ + ++S +P P PS   ++S      +K+L+WSS      K  ++A  A P
Sbjct: 183 PSEEYPVLAFSSAPAPFPSKGKVWSI-----QKYLRWSSRITEQAKKFISANLAKP 233



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>METX_ACIAD (Q6FEQ3) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 387

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 576 DQGACLVLCHLASGHSTARGHTRGDDKTIG 665
           D    +++CH  SGH  A G+   DDK  G
Sbjct: 46  DYSNAILICHALSGHHHAAGYHHDDDKKAG 75



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>CAPSD_PCV2 (O56129) Capsid protein|
          Length = 233

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 635 THERRRQNDRRHAPRTHLG 691
           T+ RRR   RRH PR+HLG
Sbjct: 2   TYPRRRYRRRRHRPRSHLG 20


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,553,325
Number of Sequences: 219361
Number of extensions: 2252146
Number of successful extensions: 6078
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6064
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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