>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 489 EAGPVHETWVPPQGQTGDGRTSLNDRLGY 403
           E  P +  WVPP+GQ+GDGRT LND+ GY
Sbjct: 768 EDDPDYCVWVPPEGQSGDGRTHLNDKYGY 796

>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein|
           5.1) (Ultrahigh sulfur keratin-associated protein 5.1)
          Length = 278

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 40/113 (35%), Positives = 43/113 (38%), Gaps = 9/113 (7%)
 Frame = -1

Query: 340 LCCCSWIVNMCSESSDGIKPLGV-----GACGILGRHWSRG*LT*IGN--GGYWSLGQSF 182
           +CCC   V  CS SS G    G      GACG  G   S+G     G   GG  S G S 
Sbjct: 140 MCCC---VPACSCSSCGKGGCGSCGCSKGACGSCGG--SKGGCGSCGGCKGGCGSCGGSK 194

Query: 181 KGT*IQSSG*AFRTYVCRY*DCRRECIS--PCQGFRNGCISSCLITRFCKVLC 29
            G     SG       C    C   C S   C G + GC SSC     CK  C
Sbjct: 195 GGC---GSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCC 244

>YL688_MIMIV (Q5UNV2) Hypothetical protein L688|
          Length = 236

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -1

Query: 142 TYVC-RY*DCRRECISPCQGFRNGCISSCLITRFCKVLC 29
           TY C  Y +C   C SPC  +   C+  C  ++ C   C
Sbjct: 27  TYPCVTYGNCYTTCASPCLPYPTNCVQVCTSSQPCPSPC 65

>KUP_CORGL (Q8NSG3) Probable potassium transport system protein kup|
          Length = 624

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = -2

Query: 132 VVIKIVEENVYH--PVKVSEMDVYHHVSLR 49
           V+++IV+E+V H  P + +EM+V HH  +R
Sbjct: 510 VIVRIVQEHVPHVPPEERAEMEVLHHAPIR 539

>RCOR2_RAT (Q5FWT8) REST corepressor 2|
          Length = 523

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 174 VPLKL*PSDQ*PPLPI*VSQPLLQCRPSIPQAPT 275
           VP  + P+   PP P  +SQP    RP +P APT
Sbjct: 429 VPRSVPPAPPPPPPPTSLSQPPPLLRPPLPTAPT 462

>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)|
          Length = 523

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 174 VPLKL*PSDQ*PPLPI*VSQPLLQCRPSIPQAPT 275
           VP  + P+   PP P  +SQP    RP +P APT
Sbjct: 429 VPRSVPPAPPPPPPPTSLSQPPPLLRPPLPTAPT 462

>RCOR2_HUMAN (Q8IZ40) REST corepressor 2|
          Length = 523

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 174 VPLKL*PSDQ*PPLPI*VSQPLLQCRPSIPQAPT 275
           VP  + P+   PP P  +SQP    RP +P APT
Sbjct: 429 VPRSVPPAPPPPPPPTSLSQPPPLLRPPLPTAPT 462


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,788,768
Number of Sequences: 219361
Number of extensions: 2004539
Number of successful extensions: 5659
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5643
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)