| Clone Name | rbaal8g15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VGLG_HHV2H (P13290) Glycoprotein G | 32 | 2.4 | 2 | IL6RB_RAT (P40190) Interleukin-6 receptor beta chain precursor (... | 32 | 2.4 | 3 | ZN490_HUMAN (Q9ULM2) Zinc finger protein 490 | 31 | 3.2 | 4 | MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc an... | 30 | 5.4 | 5 | GP111_HUMAN (Q8IZF7) Probable G-protein coupled receptor 111 (G-... | 30 | 7.1 |
|---|
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 31.6 bits (70), Expect = 2.4 Identities = 31/104 (29%), Positives = 33/104 (31%), Gaps = 13/104 (12%) Frame = +1 Query: 229 PPACRTEPHPRPATPRLM------CVPSPVEVEAMSCG----AALPPVHYPGKGQWXXXX 378 PP T PRP TP P PV A A PP PG Sbjct: 456 PPPTSTHATPRPTTPGPQTTPPGPATPGPVGASAAPTADSPLTASPPATAPGP----SAA 511 Query: 379 XXXXXXXXXXXGTRGTARW--RSP*QY-HHQVDPSPTAPRMLPP 501 GTRGTAR P + H D P +P PP Sbjct: 512 NVSVAATTATPGTRGTARTPPTDPKTHPHGPADAPPGSPAPPPP 555
>IL6RB_RAT (P40190) Interleukin-6 receptor beta chain precursor (IL-6R-beta)| (Interleukin 6 signal transducer) (Membrane glycoprotein 130) (gp130) (CD130 antigen) Length = 918 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = +3 Query: 33 DTIILVH-----QESPETSMEFTMYAKRGATTSVHRAMSPFMCGFILTTLMSGLWCGRSR 197 DT+ +VH +E + EFT + A + + P F+LTTL+ L+C R Sbjct: 584 DTLYMVHMAAYTEEGGKDGPEFTFTTLKFAQGEIEAIVVPVCLAFLLTTLLGVLFCFNKR 643
>ZN490_HUMAN (Q9ULM2) Zinc finger protein 490| Length = 529 Score = 31.2 bits (69), Expect = 3.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 Query: 470 HHQQRPECCHHYDLKLHRCPDC 535 H +Q+P CH Y K H+C +C Sbjct: 178 HTEQKPNECHEYGEKPHKCKEC 199
>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 591 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = +1 Query: 226 QPPACRTE---PHPRPATPRLMCVPSPVEVEAMSCGAALPPVH 345 QPP +T P P PATP VP+PV + A + G + H Sbjct: 404 QPPQQKTPLPGPPPPPATPTQTLVPAPVHLVATAGGGSTVIAH 446
>GP111_HUMAN (Q8IZF7) Probable G-protein coupled receptor 111 (G-protein coupled| receptor PGR20) Length = 708 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Frame = -3 Query: 607 FKLDPHTGDISRKVTGRSSKVDEKTIRTPVKLQIIVVA--TFGALLVMDQLDDDTAMGFA 434 F D S +VTGR ++ + P Q+I +A T GA+L L++ T G Sbjct: 306 FTFSMRINDTSNEVTGRVLISRDELRKVPSPSQVISIAFPTIGAILEASLLENVTVNGLV 365 Query: 433 ISQFL 419 +S L Sbjct: 366 LSAIL 370 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,860,929 Number of Sequences: 219361 Number of extensions: 1903113 Number of successful extensions: 5596 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5583 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)