ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cycla... 32 2.0
2CLPB_HAEDU (Q7VNH1) Chaperone clpB 29 9.8

>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC|
           4.6.1.1) (ATP pyrophosphate-lyase) (Protein rutabaga)
          Length = 2248

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -3

Query: 463 LISGAL--TTQLPGQLLMMKMKPPLRTVSLVIAMIMIPLKIMATATKRMKLMTWNIQTTT 290
           LI GA    T LP  L+++ +         + A I +   +M     R+K + W+I  + 
Sbjct: 715 LILGAALQVTALPRTLILLLL--------FLFAFIWVSAILMLLLAVRLKWIIWDISESF 766

Query: 289 RMKTASPL*FLLVIFSLSCIRIFLMVTD 206
            ++ A  +  +++I+S+  + +F  V+D
Sbjct: 767 SLRMAITIFTVILIYSVGQVNVFTCVSD 794



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>CLPB_HAEDU (Q7VNH1) Chaperone clpB|
          Length = 856

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 614 IEKLNRRVNQLRSELVQMEDVKDQGDEELYAKLD 513
           ++KL RR+ QL+ E   ++  KD+   +  AKLD
Sbjct: 410 LDKLERRIIQLKLERQALQKEKDEASRQRLAKLD 443


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,940,921
Number of Sequences: 219361
Number of extensions: 721728
Number of successful extensions: 1877
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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