ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37a23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y939_HAEIN (P44080) Hypothetical protein HI0939 32 2.1
2SCXE_ANDAU (Q9BLM2) Probable neurotoxin pcD-1008 precursor 30 6.2
3MQO_BLOFL (Q7VRS0) Probable malate:quinone oxidoreductase (EC 1.... 30 8.1

>Y939_HAEIN (P44080) Hypothetical protein HI0939|
          Length = 238

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 626 DCSRGGCHGTASSKTCESKGKNVCSS 549
           D ++ GC G  S KTC  KGKN   S
Sbjct: 111 DLNKNGCIGKGSPKTCMKKGKNTSKS 136



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>SCXE_ANDAU (Q9BLM2) Probable neurotoxin pcD-1008 precursor|
          Length = 72

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 641 VPAKTDCSRGGCHGTASSKTCE--SKGKNVC 555
           +P+   C RG  H  A+S TC+  SKG NVC
Sbjct: 36  MPSSEVCDRGCKHNGATSGTCKEFSKGGNVC 66



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>MQO_BLOFL (Q7VRS0) Probable malate:quinone oxidoreductase (EC 1.1.99.16)|
           (Malate dehydrogenase [acceptor]) (MQO)
          Length = 524

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 257 VSV*MDKLLLLSSPCWILHLFKEFEKPQREIRSYYQCAPT 138
           +SV +   L +  P WI+H+++   KP +E  + +  A T
Sbjct: 31  MSVTLGSFLTILEPSWIIHIYERLNKPAQESSNSWNNAGT 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,984,300
Number of Sequences: 219361
Number of extensions: 1542710
Number of successful extensions: 3425
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3422
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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