ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37a18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2... 32 1.6
2LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2... 32 2.1
3CCL11_HORSE (Q9TTQ4) Eotaxin precursor (Small inducible cytokine... 31 3.5
4Y1151_HAEIN (P45076) UPF0307 protein HI1151 30 7.9

>LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein)
          Length = 1042

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -2

Query: 320 ISNSRCEKKLNQVHESLMKT--KCLKEYVMGTPNYIMVE 210
           +SN RC  +L  + +   K   +CL   ++GTPNYI  E
Sbjct: 803 VSNCRCGDRLKTLEQRAQKQHQRCLAHSLVGTPNYIAPE 841



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>LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein) (Warts-like kinase)
          Length = 1088

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -2

Query: 320 ISNSRCEKKLNQVHESLMKT--KCLKEYVMGTPNYIMVE 210
           +SN RC  +L  + +   K   +CL   ++GTPNYI  E
Sbjct: 845 VSNCRCGDRLKTLEQRARKQHQRCLAHSLVGTPNYIAPE 883



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>CCL11_HORSE (Q9TTQ4) Eotaxin precursor (Small inducible cytokine A11) (CCL11)|
          Length = 100

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 494 LLCLMLTTASFSSMGVTSSSKISTGCVAGEATASL 598
           LLCL+LTTA+FS+  +     IST C    A+  +
Sbjct: 7   LLCLLLTTAAFSTQVLAQPVSISTVCCFNVASRKI 41



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>Y1151_HAEIN (P45076) UPF0307 protein HI1151|
          Length = 178

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/79 (25%), Positives = 33/79 (41%)
 Frame = -1

Query: 549 LDVTPIEEKLAVVSMRHNNTQHVMAKMYKALDSLCLKVITSSVTVVDGRTVHTMFIETEE 370
           +DV PI E L  +  +HN  Q ++ K+ K  D L          V  G    T  +    
Sbjct: 88  IDVEPIREALDKIENKHNQQQAMLHKIEKVRDEL----------VEKGDVALTDLLNDYP 137

Query: 369 MDGAQTIKEMVQAALSHLE 313
               Q ++ ++++A   LE
Sbjct: 138 NGDRQQLRNLIRSAQKELE 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,806,404
Number of Sequences: 219361
Number of extensions: 1986150
Number of successful extensions: 5257
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5253
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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