ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36l12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468773.1| Oryza sativa (japonica cultivar-group), mRNA 137 5e-29
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 137 5e-29
3gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 137 5e-29
4gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genom... 137 5e-29
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
6dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
7dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
8gb|AY107812.1| Zea mays PCO119122 mRNA sequence 129 1e-26
9dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for h... 58 4e-05
10gb|AC133176.2| Mus musculus BAC clone RP24-111D1 from chromosome... 44 0.55
11emb|BX015981.1|CNS08KHT Single read from an extremity of a full-... 44 0.55
12emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 42 2.2
13emb|CR339064.10| Zebrafish DNA sequence from clone CH211-152J3 i... 42 2.2
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
15dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
16ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 40 8.6
17gb|AC123761.17| Mus musculus chromosome 3, clone RP24-331E24, co... 40 8.6
18gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, com... 40 8.6
19ref|XM_747822.1| Aspergillus fumigatus Af293 C6 transcription fa... 40 8.6
20emb|BX004847.31| Zebrafish DNA sequence from clone CH211-59C8 in... 40 8.6
21ref|XM_947841.1| Theileria annulata strain Ankara DEAD-box famil... 40 8.6
22emb|AL731547.9| Human DNA sequence from clone RP11-565H13 on chr... 40 8.6
23emb|AL589941.6| Human DNA sequence from clone RP13-377P8 on chro... 40 8.6
24emb|AL589736.6| Human DNA sequence from clone RP11-298P24 on chr... 40 8.6
25dbj|AK143474.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN ... 40 8.6
26gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 40 8.6
27gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.6
28gb|AC096533.3| Homo sapiens chromosome 1 clone RP11-6B6, complet... 40 8.6
29emb|AL935305.13| Zebrafish DNA sequence from clone CH211-226I4 i... 40 8.6
30gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 40 8.6
31gb|AC006961.16|AC006961 Homo sapiens chromosome 18, clone RP11-3... 40 8.6
32emb|CR759840.6| Zebrafish DNA sequence from clone DKEY-239O7 in ... 40 8.6
33emb|AL139296.4|CNS01DXF Human chromosome 14 DNA sequence BAC C-2... 40 8.6
34emb|AL824706.8| Mouse DNA sequence from clone RP23-218A4 on chro... 40 8.6
35emb|AL929309.6| Zebrafish DNA sequence from clone CH211-51L3 in ... 40 8.6

>ref|XM_468773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3546

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 471  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 531  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                                         
Query: 591  agcactcgcttcactggcctggcaccgta 619
            | |||||||||||||||||||||||||||
Sbjct: 2975 atcactcgcttcactggcctggcaccgta 2947



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                            
Query: 411      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17651152 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17651093

                                                                            
Query: 471      tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17651092 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17651033

                                                                            
Query: 531      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17651032 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17650973

                                             
Query: 591      agcactcgcttcactggcctggcaccgta 619
                | |||||||||||||||||||||||||||
Sbjct: 17650972 atcactcgcttcactggcctggcaccgta 17650944



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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence,
            complete sequence
          Length = 97152

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Plus

                                                                        
Query: 411  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3925 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3984

                                                                        
Query: 471  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3985 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 4044

                                                                        
Query: 531  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 4045 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 4104

                                         
Query: 591  agcactcgcttcactggcctggcaccgta 619
            | |||||||||||||||||||||||||||
Sbjct: 4105 atcactcgcttcactggcctggcaccgta 4133



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>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
              sequence
          Length = 136916

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Plus

                                                                          
Query: 411    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
              |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 132855 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 132914

                                                                          
Query: 471    tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
              ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 132915 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 132974

                                                                          
Query: 531    tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
              ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 132975 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 133034

                                           
Query: 591    agcactcgcttcactggcctggcaccgta 619
              | |||||||||||||||||||||||||||
Sbjct: 133035 atcactcgcttcactggcctggcaccgta 133063



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                            
Query: 411      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17644693 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17644634

                                                                            
Query: 471      tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17644633 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17644574

                                                                            
Query: 531      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17644573 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17644514

                                             
Query: 591      agcactcgcttcactggcctggcaccgta 619
                | |||||||||||||||||||||||||||
Sbjct: 17644513 atcactcgcttcactggcctggcaccgta 17644485



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>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17, full
            insert sequence
          Length = 3303

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 471  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 531  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                                         
Query: 591  agcactcgcttcactggcctggcaccgta 619
            | |||||||||||||||||||||||||||
Sbjct: 2975 atcactcgcttcactggcctggcaccgta 2947



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>dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D01, full
            insert sequence
          Length = 2290

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 470
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 2109 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 2050

                                                                        
Query: 471  tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 530
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 2049 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 1990

                                                                        
Query: 531  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 590
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 1989 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 1930

                                         
Query: 591  agcactcgcttcactggcctggcaccgta 619
            | |||||||||||||||||||||||||||
Sbjct: 1929 atcactcgcttcactggcctggcaccgta 1901



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>gb|AY107812.1| Zea mays PCO119122 mRNA sequence
          Length = 696

 Score =  129 bits (65), Expect = 1e-26
 Identities = 196/239 (82%), Gaps = 3/239 (1%)
 Strand = Plus / Plus

                                                                       
Query: 390 catcagactgtcggcaggaacttctcgtcttgagcagcagccggcttggattcctcgttc 449
           |||||||| | ||||| |||||||||| |||   ||||||| ||||| |||| |||   |
Sbjct: 368 catcagacagccggcaagaacttctcgcctt---cagcagcgggcttcgattgctcaccc 424

                                                                       
Query: 450 atcttccggaagacaagcttctgctgggggagctgtccgttcgacggcaccgtcacctga 509
           |  |||||||| || |||||||| || || ||||| ||||| || |||||||| ||||| 
Sbjct: 425 actttccggaaaactagcttctgttgcggaagctggccgttagagggcaccgtgacctgg 484

                                                                       
Query: 510 gtgtcgacggagatgctgtcctcgtccttgaactcgcctctgaggatacccttggccagt 569
           ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||| || |||
Sbjct: 485 gtgtccacaaagatgctgtcctcgtccttgaaatcacctctgaggatgcccttcgcgagt 544

                                                                      
Query: 570 tcgttctccacgtactgctggagcactcgcttcactggcctggcaccgtagttggggtc 628
           ||||||||||||| ||| || | ||||| |||||| ||||| || || ||||| |||||
Sbjct: 545 tcgttctccacgtgctgttgaatcactctcttcaccggcctcgcgccatagttcgggtc 603



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>dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for heat shock protein,
            complete cds
          Length = 3144

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 528  tcctcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgc 587
            ||||| |||||||| || ||||| |  || || ||||||| ||||||||| || | ||||
Sbjct: 2831 tcctcatccttgaattctcctcttaatattcctttggccaattcgttctcaacattctgc 2772

                                                     
Query: 588  tggagcactcgcttcactggcctggcaccgtagttggggtc 628
            |||| ||| |||||||||||||  || || |||||||||||
Sbjct: 2771 tggatcacccgcttcactggccgtgctccatagttggggtc 2731



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>gb|AC133176.2| Mus musculus BAC clone RP24-111D1 from chromosome 14, complete sequence
          Length = 171069

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 162    agacaaacaaccttagtatgct 183
              ||||||||||||||||||||||
Sbjct: 102841 agacaaacaaccttagtatgct 102862



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>emb|BX015981.1|CNS08KHT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA24AA05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 567

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 303 atatgcccaaagagatacactaccagttcg 332
           ||||||||||||| |||||| |||||||||
Sbjct: 219 atatgcccaaagacatacacgaccagttcg 190



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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 575   ctccacgtactgctggagcac 595
             |||||||||||||||||||||
Sbjct: 23702 ctccacgtactgctggagcac 23722



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>emb|CR339064.10| Zebrafish DNA sequence from clone CH211-152J3 in linkage group 23,
             complete sequence
          Length = 98209

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    atctgtaaaactcactcaccg 84
             |||||||||||||||||||||
Sbjct: 24015 atctgtaaaactcactcaccg 23995



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                            
Query: 584     ctgctggagcactcgcttcactggcctggcaccgtagttggggtc 628
               |||||||| ||| | |||||| ||||| ||||||||||| |||||
Sbjct: 4568010 ctgctggatcaccctcttcacaggcctagcaccgtagttagggtc 4568054



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>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1297_C09
          Length = 163378

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 584    ctgctggagcactcgcttcactggcctggcaccgtagttggggtc 628
              |||||||| ||| | |||||| ||||| ||||||||||| |||||
Sbjct: 103389 ctgctggatcaccctcttcacaggcctagcaccgtagttagggtc 103433



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>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT2G25140 mRNA,
            complete cds
          Length = 3223

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 593  cactcgcttcactggcctggcaccgtagttggggtc 628
            |||||||||||| ||||| || |||||||| |||||
Sbjct: 2887 cactcgcttcaccggccttgccccgtagttagggtc 2852



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>gb|AC123761.17| Mus musculus chromosome 3, clone RP24-331E24, complete sequence
          Length = 192157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tcttgaactttctataagct 37
             ||||||||||||||||||||
Sbjct: 80134 tcttgaactttctataagct 80153



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>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence
          Length = 205076

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   gaagcaaaacagaattttgaaatg 158
             |||||||||||| |||||||||||
Sbjct: 40467 gaagcaaaacagcattttgaaatg 40444



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>ref|XM_747822.1| Aspergillus fumigatus Af293 C6 transcription factor UaY (Afu1g15470)
            partial mRNA
          Length = 3267

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  gacaagcttctgctggggga 480
            ||||||||||||||||||||
Sbjct: 2437 gacaagcttctgctggggga 2418



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>emb|BX004847.31| Zebrafish DNA sequence from clone CH211-59C8 in linkage group 21,
             complete sequence
          Length = 179765

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gaaatgcagtgaatgcattc 117
             ||||||||||||||||||||
Sbjct: 33410 gaaatgcagtgaatgcattc 33429



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>ref|XM_947841.1| Theileria annulata strain Ankara DEAD-box family helicase (TA07525)
            partial mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 298  ctatgatatgcccaaagagataca 321
            |||||||||||||||||| |||||
Sbjct: 2046 ctatgatatgcccaaagacataca 2069



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>emb|AL731547.9| Human DNA sequence from clone RP11-565H13 on chromosome 10 Contains the
             5' end of a variant of the NEBL gene for the nebulette
             protein (actin-binding Z-disc protein), a novel gene, a
             ribosomal protein L15 (RPL15)(EC45, RPL10, RPLY10, RPYL10)
             pseudogene, a pseudogene similar to part of HOM-TES-85
             (tumour antigen HOM-TES-85) and a CpG island, complete
             sequence
          Length = 175842

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   agaagcaaaacagaattttg 153
             ||||||||||||||||||||
Sbjct: 75749 agaagcaaaacagaattttg 75768



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>emb|AL589941.6| Human DNA sequence from clone RP13-377P8 on chromosome 6, complete
             sequence
          Length = 80600

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    aactttctataagctacagcaatt 46
             |||||||||||| |||||||||||
Sbjct: 59436 aactttctataaactacagcaatt 59459



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>emb|AL589736.6| Human DNA sequence from clone RP11-298P24 on chromosome 6, complete
             sequence
          Length = 53491

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   agcaaaacagaattttgaaa 156
             ||||||||||||||||||||
Sbjct: 20151 agcaaaacagaattttgaaa 20170



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>dbj|AK143474.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched
            library, clone:E860008H02 product:unclassifiable, full
            insert sequence
          Length = 2902

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   aaatctgtaaaactcactca 81
            ||||||||||||||||||||
Sbjct: 2754 aaatctgtaaaactcactca 2735



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>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 3223

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 593  cactcgcttcactggcctggcaccgtagttggggtc 628
            |||||||||||| ||||| || |||||||| |||||
Sbjct: 2887 cactcgcttcaccggccttgccccgtagttagggtc 2852



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 496     gcaccgtcacctgagtgtcg 515
               ||||||||||||||||||||
Sbjct: 5414972 gcaccgtcacctgagtgtcg 5414953



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>gb|AC096533.3| Homo sapiens chromosome 1 clone RP11-6B6, complete sequence
          Length = 163339

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tggagcaaagaattctggct 286
             ||||||||||||||||||||
Sbjct: 98840 tggagcaaagaattctggct 98859



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>emb|AL935305.13| Zebrafish DNA sequence from clone CH211-226I4 in linkage group 23,
             complete sequence
          Length = 190222

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    atctgtaaaactcactcacc 83
             ||||||||||||||||||||
Sbjct: 85197 atctgtaaaactcactcacc 85216



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>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 2895

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 593  cactcgcttcactggcctggcaccgtagttggggtc 628
            |||||||||||| ||||| || |||||||| |||||
Sbjct: 2733 cactcgcttcaccggccttgccccgtagttagggtc 2698



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>gb|AC006961.16|AC006961 Homo sapiens chromosome 18, clone RP11-31P16, complete sequence
          Length = 171419

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   aattttgaaatggccagaca 166
             ||||||||||||||||||||
Sbjct: 11801 aattttgaaatggccagaca 11820



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>emb|CR759840.6| Zebrafish DNA sequence from clone DKEY-239O7 in linkage group 25,
             complete sequence
          Length = 110071

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   gggttgtcctgctgctaataatgt 261
             ||||||| ||||||||||||||||
Sbjct: 56225 gggttgttctgctgctaataatgt 56248



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>emb|AL139296.4|CNS01DXF Human chromosome 14 DNA sequence BAC C-2504D12 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209710

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 133    cagaagcaaaacagaattttgaaa 156
              |||||||||||||| |||||||||
Sbjct: 137584 cagaagcaaaacagcattttgaaa 137607



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>emb|AL824706.8| Mouse DNA sequence from clone RP23-218A4 on chromosome 4, complete
             sequence
          Length = 207687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaatctgtaaaactcactca 81
             ||||||||||||||||||||
Sbjct: 27383 aaatctgtaaaactcactca 27402



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>emb|AL929309.6| Zebrafish DNA sequence from clone CH211-51L3 in linkage group 25,
             complete sequence
          Length = 191745

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   gggttgtcctgctgctaataatgt 261
             ||||||| ||||||||||||||||
Sbjct: 80560 gggttgttctgctgctaataatgt 80583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,295,186
Number of Sequences: 3902068
Number of extensions: 5295186
Number of successful extensions: 100358
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100205
Number of HSP's gapped (non-prelim): 153
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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