ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYSN_ACACA (P05659) Myosin-2 heavy chain, non muscle (Myosin II ... 30 4.9

>MYSN_ACACA (P05659) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 1509

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
 Frame = -3

Query: 372  KDIKEIRSALQEEKAG-----SKTEQTGQTQEDQVLKTDDEKTEQQTAVKA*K 229
            +++ + R+ L+EEK+G     SK +Q GQ  ED   + D  K++   A K+ K
Sbjct: 1066 EELAQTRAQLEEEKSGKEAASSKAKQLGQQLEDARSEVDSLKSKLSAAEKSLK 1118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,484,398
Number of Sequences: 219361
Number of extensions: 1646175
Number of successful extensions: 4417
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4409
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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