| Clone Name | rbaal36g20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234439.1|HVU234439 Hordeum vulgare partial mRNA; clone cMWG0725 Length = 383 Score = 365 bits (184), Expect = 1e-97 Identities = 200/203 (98%), Gaps = 2/203 (0%) Strand = Plus / Minus Query: 42 tactcctttagcatagatgggtgtgtgaaaatna-ctttacatacagagagagtataata 100 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 203 tactcctttagcatagatgggtgtgtgaaaattaactttacatacagagagagtataata 144 Query: 101 ctacgcctgctctgctgtgctctgccgtgtgcccagcagcagacccaagcagggcacact 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctacgcctgctctgctgtgctctgccgtgtgcccagcagcagacccaagcagggcacact 84 Query: 161 gtacgtgtttgttcttctcctcgcga-cccccttgcttttgtgcgtggaatttgctcaga 219 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 83 gtacgtgtttgttcttctcctcgcgaccccccttgcttttgtgcgtggaatttgctcaga 24 Query: 220 ttctggaggggatgaggggcgtg 242 ||||||||||||||||||||||| Sbjct: 23 ttctggaggggatgaggggcgtg 1
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 285 bits (144), Expect = 9e-74 Identities = 186/200 (93%) Strand = Plus / Plus Query: 434 acctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagc 493 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 24821411 acctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgagg 24821470 Query: 494 ccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcg 553 ||||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 24821471 ccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcg 24821530 Query: 554 atgtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtg 613 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 24821531 atgtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtg 24821590 Query: 614 cagttcttgagcccccacgc 633 |||||||||||||||||||| Sbjct: 24821591 cagttcttgagcccccacgc 24821610 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 24821183 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 24821242 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 24821243 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 24821293 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 4755695 acgccgccgccgccgccacgccgc 4755718
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 285 bits (144), Expect = 9e-74 Identities = 186/200 (93%) Strand = Plus / Plus Query: 434 acctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagc 493 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122212 acctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgagg 122271 Query: 494 ccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcg 553 ||||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 122272 ccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcg 122331 Query: 554 atgtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtg 613 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 122332 atgtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtg 122391 Query: 614 cagttcttgagcccccacgc 633 |||||||||||||||||||| Sbjct: 122392 cagttcttgagcccccacgc 122411 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 121984 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 122043 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 122044 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 122094
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 285 bits (144), Expect = 9e-74 Identities = 186/200 (93%) Strand = Plus / Plus Query: 434 acctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagc 493 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 25857 acctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgagg 25916 Query: 494 ccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcg 553 ||||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 25917 ccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcg 25976 Query: 554 atgtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtg 613 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 25977 atgtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtg 26036 Query: 614 cagttcttgagcccccacgc 633 |||||||||||||||||||| Sbjct: 26037 cagttcttgagcccccacgc 26056 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 25629 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 25688 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 25689 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 25739
>ref|XM_483211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1507 Score = 283 bits (143), Expect = 4e-73 Identities = 196/214 (91%) Strand = Plus / Minus Query: 436 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 495 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1155 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 1096 Query: 496 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 555 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1095 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 1036 Query: 556 gtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtgca 615 ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1035 gtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtgca 976 Query: 616 gttcttgagcccccacgctgccaccgncagcctg 649 |||||||||||||||||| |||| | ||||||| Sbjct: 975 gttcttgagcccccacgcctccacggccagcctg 942 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1293 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1234 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1233 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 1183
>ref|XM_507283.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1345_D02.38 mRNA Length = 1567 Score = 283 bits (143), Expect = 4e-73 Identities = 196/214 (91%) Strand = Plus / Minus Query: 436 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 495 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1147 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 1088 Query: 496 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 555 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1087 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 1028 Query: 556 gtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtgca 615 ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1027 gtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtgca 968 Query: 616 gttcttgagcccccacgctgccaccgncagcctg 649 |||||||||||||||||| |||| | ||||||| Sbjct: 967 gttcttgagcccccacgcctccacggccagcctg 934 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1285 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1226 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1225 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 1175
>dbj|AK099206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F20, full insert sequence Length = 1321 Score = 283 bits (143), Expect = 4e-73 Identities = 196/214 (91%) Strand = Plus / Minus Query: 436 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 495 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 921 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 862 Query: 496 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 555 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 861 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 802 Query: 556 gtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtgca 615 ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 801 gtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtgca 742 Query: 616 gttcttgagcccccacgctgccaccgncagcctg 649 |||||||||||||||||| |||| | ||||||| Sbjct: 741 gttcttgagcccccacgcctccacggccagcctg 708 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1059 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1000 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 999 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 949
>dbj|AK065126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P06, full insert sequence Length = 1507 Score = 283 bits (143), Expect = 4e-73 Identities = 196/214 (91%) Strand = Plus / Minus Query: 436 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 495 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1155 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 1096 Query: 496 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 555 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1095 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 1036 Query: 556 gtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtgca 615 ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1035 gtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtgca 976 Query: 616 gttcttgagcccccacgctgccaccgncagcctg 649 |||||||||||||||||| |||| | ||||||| Sbjct: 975 gttcttgagcccccacgcctccacggccagcctg 942 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1293 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1234 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1233 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 1183
>dbj|AK064774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A23, full insert sequence Length = 1567 Score = 283 bits (143), Expect = 4e-73 Identities = 196/214 (91%) Strand = Plus / Minus Query: 436 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 495 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1147 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 1088 Query: 496 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 555 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1087 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 1028 Query: 556 gtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtgca 615 ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1027 gtacggcggcacgacgacggcggtgacggtgtcgctgaaccactcctccttctgcgtgca 968 Query: 616 gttcttgagcccccacgctgccaccgncagcctg 649 |||||||||||||||||| |||| | ||||||| Sbjct: 967 gttcttgagcccccacgcctccacggccagcctg 934 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1285 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1226 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 325 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1225 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 1175
>gb|AY107617.1| Zea mays PCO084394 mRNA sequence Length = 1016 Score = 202 bits (102), Expect = 1e-48 Identities = 174/198 (87%) Strand = Plus / Minus Query: 436 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 495 ||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||| || Sbjct: 627 ctcgttgaggttgccgagatggccgatcctgaagaccttcccggcgactttgttgaggcc 568 Query: 496 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 555 ||| ||||| |||||||||||||||||||| |||||| |||||| |||| ||||||||| Sbjct: 567 gaggccgagactgaggttgtaccgcttccacgcgtgcctgacgacctcggcgctgtcgat 508 Query: 556 gtatggcggcacgacgacggcggtgaccgtgtcgctgaagttctcctccttctcggtgca 615 || |||||||||||| |||||||||| ||||||||||| ||||||||||| | ||| Sbjct: 507 gttgggcggcacgacggcggcggtgacggtgtcgctgaaccactcctccttctggcagca 448 Query: 616 gttcttgagcccccacgc 633 ||| ||||||||||||| Sbjct: 447 gttgctgagcccccacgc 430 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Minus Query: 214 ctcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgcca 273 ||||||| || || |||||||| |||||||| || || ||||||||||||||||| |||| Sbjct: 766 ctcagatcctagatgggatgagcggcgtggagtttgacaggtacgccgccgcggctgcca 707 Query: 274 cgccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccga 333 ||||||| || || ||||| |||||||| | |||||||||||||||||||| |||| | Sbjct: 706 cgccgctacctagtttcactgggtaccccacatccttgagcaccatctccacaccgctca 647 Query: 334 ggcaacccagaagttgcagct 354 | || |||||||||||||||| Sbjct: 646 gacatcccagaagttgcagct 626
>gb|AY053359.1| Spirodela polyrhiza serine-glyoxylate aminotransferase (SGAT) mRNA, partial cds Length = 320 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||||||||||||||| || || ||| ||||||||||| |||||||| Sbjct: 183 tcagatcctggaggggatgaggggggtattgttgaggagatacgccgccgctgccgccac 124 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 334 |||||||| ||||||||||||||||| | |||| | | |||||||||||| |||| || Sbjct: 123 cccgctgcctagcttcaccgggtaccccacgtcccttaacaccatctccacgccgctcag 64 Query: 335 gcaacccagaagttgcagct 354 ||| |||| |||||||||| Sbjct: 63 gcaccccaacagttgcagct 44
>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA, complete cds Length = 1378 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Minus Query: 215 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 274 |||||| ||||||||||||||||| || || ||| ||||||||||| |||||||| Sbjct: 1241 tcagatcctggaggggatgaggggggtattgttgaggagatacgccgccgctgccgccac 1182 Query: 275 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 334 |||||||| |||||| |||||||||| | |||| | | |||||||||||| |||| || Sbjct: 1181 cccgctgcctagcttcgccgggtaccccacgtcccttaacaccatctccacgccgctcag 1122 Query: 335 gcaacccagaagttgcagct 354 ||| |||| |||||||||| Sbjct: 1121 gcaccccaacagttgcagct 1102
>dbj|D86125.1| Hyphomicrobium methylovorum DNA for serine-glyoxylate aminotransferase, complete cds Length = 2303 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 448 gccgaggtggccgatcctgaagaccttgccggcgaccttgttgagcccgagcccga 503 ||||||||||||||| | |||||| |||||||||||||||||||| ||||| |||| Sbjct: 1957 gccgaggtggccgatgcggaagactttgccggcgaccttgttgaggccgagaccga 1902
>gb|AE007302.1| Sinorhizobium meliloti 1021 plasmid pSymA section 108 of 121 of the complete plasmid sequence Length = 10507 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 434 acctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagc 493 |||||||| |||| ||||||||||||||||||||| ||| ||| || |||||| ||||| Sbjct: 4604 acctcgttcaggtcgccgaggtggccgatcctgaaaacccggcccgccaccttgctgagc 4663 Query: 494 cc 495 || Sbjct: 4664 cc 4665
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 541 ctcgctgctgtcgatgtatggc 562 |||||||||||||||||||||| Sbjct: 1677290 ctcgctgctgtcgatgtatggc 1677311
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgcc 277 |||||||||||||||||||||| Sbjct: 4363069 acgccgccgcggccgccacgcc 4363090
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgcc 277 |||||||||||||||||||||| Sbjct: 4295847 acgccgccgcggccgccacgcc 4295868
>gb|AC007589.8| Drosophila melanogaster clone BACR20D10, complete sequence Length = 164712 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 5415 cagaagttgcagctgcagcaa 5435
>gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete sequence Length = 160712 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 132905 cagaagttgcagctgcagcaa 132925
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ccgccgcggccgccacgccgc 279 ||||||||||||||||||||| Sbjct: 248577 ccgccgcggccgccacgccgc 248557
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgc 276 ||||||||||||||||||||| Sbjct: 34756737 acgccgccgcggccgccacgc 34756757 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 ggcggcacgacgacggcggtg 580 ||||||||||||||||||||| Sbjct: 19963293 ggcggcacgacgacggcggtg 19963313
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 acgccgccgcggccgccacgc 276 ||||||||||||||||||||| Sbjct: 105913 acgccgccgcggccgccacgc 105893
>ref|XM_842631.1| Leishmania major strain Friedlin flagellar radial spoke protein (LMJ_0701) partial mRNA Length = 1773 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ccgccgcggccgccacgccgc 279 ||||||||||||||||||||| Sbjct: 277 ccgccgcggccgccacgccgc 297
>ref|XM_502224.1| Yarrowia lipolytica CLIB122, YALI0C24398g predicted mRNA Length = 798 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 agcccgagcccgaggctgagg 511 ||||||||||||||||||||| Sbjct: 593 agcccgagcccgaggctgagg 613
>ref|XM_505045.1| Yarrowia lipolytica CLIB122, YALI0F05720g predicted mRNA Length = 366 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 589 gctgaagttctcctccttctc 609 ||||||||||||||||||||| Sbjct: 207 gctgaagttctcctccttctc 227
>emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chromosome 1p35.1-36.13 Contains the C1QA gene for complement component 1( q subcomponent, alpha polypeptide), the C1QG gene for complement component 1 (q subcomponent, gamma polypeptide), the C1QB gene for complement component 1 (q subcomponent, beta polypeptide), the 5' end of the EPHB2 gene for EphB2 and a CpG island, complete sequence Length = 87320 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 gcctgctctgctgtgctctgc 125 ||||||||||||||||||||| Sbjct: 53126 gcctgctctgctgtgctctgc 53106
>ref|NM_169023.1| Drosophila melanogaster Cdep CG31536-RB, transcript variant B (Cdep), mRNA Length = 4108 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 3121 cagaagttgcagctgcagcaa 3141
>ref|NM_169022.1| Drosophila melanogaster Cdep CG31536-RA, transcript variant A (Cdep), mRNA Length = 4330 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 3343 cagaagttgcagctgcagcaa 3363
>gb|AY094931.1| Drosophila melanogaster RH50880 full insert cDNA Length = 1923 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 566 cagaagttgcagctgcagcaa 586
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gaggtggccgaggtggccgat 462 ||||||||||||||||||||| Sbjct: 3036008 gaggtggccgaggtggccgat 3035988 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gaggtggccgaggtggccga 461 |||||||||||||||||||| Sbjct: 3036044 gaggtggccgaggtggccga 3036025 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gaggtggccgaggtggccga 461 |||||||||||||||||||| Sbjct: 3036035 gaggtggccgaggtggccga 3036016 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gaggtggccgaggtggccga 461 |||||||||||||||||||| Sbjct: 3036026 gaggtggccgaggtggccga 3036007 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gaggtggccgaggtggccga 461 |||||||||||||||||||| Sbjct: 3036017 gaggtggccgaggtggccga 3035998
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 531 gcttgacgatctcgctgctgtcgat 555 |||||||||||||||||| |||||| Sbjct: 80887 gcttgacgatctcgctgccgtcgat 80911
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgc 276 ||||||||||||||||||||| Sbjct: 34846809 acgccgccgcggccgccacgc 34846829 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 ggcggcacgacgacggcggtg 580 ||||||||||||||||||||| Sbjct: 19956321 ggcggcacgacgacggcggtg 19956341
>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence, complete sequence Length = 137297 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 ggcggcacgacgacggcggtg 580 ||||||||||||||||||||| Sbjct: 115582 ggcggcacgacgacggcggtg 115602
>gb|BT024186.1| Drosophila melanogaster SD10794 full insert cDNA Length = 4048 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 3041 cagaagttgcagctgcagcaa 3061
>gb|AE003604.4| Drosophila melanogaster chromosome 3R, section 4 of 118 of the complete sequence Length = 303434 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cagaagttgcagctgcagcaa 361 ||||||||||||||||||||| Sbjct: 100396 cagaagttgcagctgcagcaa 100416
>dbj|AP001547.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802F5, complete sequence Length = 144493 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 gcctgctctgctgtgctctgc 125 ||||||||||||||||||||| Sbjct: 115464 gcctgctctgctgtgctctgc 115484
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 acgccgccgcggccgccacgc 276 ||||||||||||||||||||| Sbjct: 3418066 acgccgccgcggccgccacgc 3418046
>gb|AF039000.1|AF039000 Fritillaria agrestis putative serine-glyoxylate aminotransferase (SGA) mRNA, complete cds Length = 1487 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 306 tccttgagcaccatctccaccccgccgaggcaacccagaagttgcagct 354 |||||||| ||||||||||| || | ||||||||||| | |||||||| Sbjct: 1233 tccttgagtaccatctccacaccactcaggcaacccagcaattgcagct 1185
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 589 gctgaagttctcctccttctc 609 ||||||||||||||||||||| Sbjct: 850887 gctgaagttctcctccttctc 850907
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 agcccgagcccgaggctgagg 511 ||||||||||||||||||||| Sbjct: 3252873 agcccgagcccgaggctgagg 3252853
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 175326 acgccgccgccgccgccacgccgc 175303
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cgccgccgcggccgccacgc 276 |||||||||||||||||||| Sbjct: 3198014 cgccgccgcggccgccacgc 3198033
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 cggcacgacgacggcggtga 581 |||||||||||||||||||| Sbjct: 2380719 cggcacgacgacggcggtga 2380738
>ref|XM_364410.1| Magnaporthe grisea 70-15 hypothetical protein (MG09255.4) partial mRNA Length = 4989 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gagcccgagcccgaggctga 509 |||||||||||||||||||| Sbjct: 4123 gagcccgagcccgaggctga 4142
>gb|BC072110.1| Xenopus laevis hypothetical protein MGC79060, mRNA (cDNA clone MGC:79060 IMAGE:4885213), complete cds Length = 2709 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cagaagttgcagctgcagca 360 |||||||||||||||||||| Sbjct: 1870 cagaagttgcagctgcagca 1851
>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence Length = 175566 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gcctgctctgctgtgctctg 124 |||||||||||||||||||| Sbjct: 7163 gcctgctctgctgtgctctg 7144
>ref|XM_865675.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4), transcript variant 1 (LOC613955), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gcggccgccacgccgctgcc 283 |||||||||||||||||||| Sbjct: 110 gcggccgccacgccgctgcc 129
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cgccgccgcggccgccacgc 276 |||||||||||||||||||| Sbjct: 783136 cgccgccgcggccgccacgc 783117
>gb|AC148021.2| Mus musculus BAC clone RP23-9A7 from chromosome 19, complete sequence Length = 213178 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gcctgctctgctgtgctctg 124 |||||||||||||||||||| Sbjct: 6242 gcctgctctgctgtgctctg 6261
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 gcagggcacactgtacgtgtttgttctt 176 ||||| ||||||||| |||||||||||| Sbjct: 106185 gcaggacacactgtaggtgtttgttctt 106158
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ggtggccgaggtggccgatc 463 |||||||||||||||||||| Sbjct: 1519686 ggtggccgaggtggccgatc 1519705
>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence Length = 194681 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gcctgctctgctgtgctctg 124 |||||||||||||||||||| Sbjct: 74034 gcctgctctgctgtgctctg 74015
>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cctgctctgctgtgctctgc 125 |||||||||||||||||||| Sbjct: 75886 cctgctctgctgtgctctgc 75905
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tctggaggggatgaggggcgtgga 244 ||||||||||||| |||||||||| Sbjct: 114645 tctggaggggatggggggcgtgga 114622
>ref|XM_844389.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily C, member 1, transcript variant 1 (LOC607587), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gaggtggccgaggtggccga 461 |||||||||||||||||||| Sbjct: 326 gaggtggccgaggtggccga 307
>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete sequence Length = 178725 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cctgctctgctgtgctctgc 125 |||||||||||||||||||| Sbjct: 6551 cctgctctgctgtgctctgc 6532
>gb|BT009343.1| Triticum aestivum clone wlm4.pk0021.h10:fis, full insert mRNA sequence Length = 1639 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacg 275 |||||||||||||||||||| Sbjct: 458 acgccgccgcggccgccacg 477
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gaggtggccgaggtggccga 461 |||||||||||||||||||| Sbjct: 219949 gaggtggccgaggtggccga 219968
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcggtgac 582 ||||| |||||||||||||||||| Sbjct: 116929 tggcgacacgacgacggcggtgac 116906
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcgg 578 |||||||||||||||||||| Sbjct: 6500 tggcggcacgacgacggcgg 6481
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 ttgacgatctcgctgctgtcgatg 556 ||||||||||||| |||||||||| Sbjct: 418774 ttgacgatctcgccgctgtcgatg 418751
>emb|AL355532.10| Human DNA sequence from clone RP11-487F5 on chromosome 6 Contains the 3' part of the GRIK2 (glutamate receptor, ionotropic, kainate 2) gene, ESTs, STSs and GSSs, complete sequence Length = 181302 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tgcccagcagcagacccaagcagg 153 ||||||| |||||||||||||||| Sbjct: 29784 tgcccagaagcagacccaagcagg 29807
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gagcccgagcccgaggctga 509 |||||||||||||||||||| Sbjct: 1928458 gagcccgagcccgaggctga 1928477
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 cggcggtgaccgtgtcgctg 592 |||||||||||||||||||| Sbjct: 4339463 cggcggtgaccgtgtcgctg 4339444
>gb|BC050949.1| Xenopus laevis, clone IMAGE:5542477, mRNA Length = 2367 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cagaagttgcagctgcagca 360 |||||||||||||||||||| Sbjct: 1854 cagaagttgcagctgcagca 1835
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcggtgac 582 ||||| |||||||||||||||||| Sbjct: 17744553 tggcgacacgacgacggcggtgac 17744530 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcgg 578 |||||||||||||||||||| Sbjct: 6843629 tggcggcacgacgacggcgg 6843610
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 cgccgccgcggccgccacgccgct 280 ||||||||| |||||||||||||| Sbjct: 19481570 cgccgccgccgccgccacgccgct 19481593
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 8094707 acgccgccgccgccgccacgccgc 8094684
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcggtgac 582 ||||| |||||||||||||||||| Sbjct: 13542497 tggcgacacgacgacggcggtgac 13542474
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 10827636 acgccgccgccgccgccacgccgc 10827659
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 cgacgacggcggtgaccgtg 586 |||||||||||||||||||| Sbjct: 25401954 cgacgacggcggtgaccgtg 25401973 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 9795031 acgccgccgccgccgccacgccgc 9795054
>gb|AC067738.17| Homo sapiens 3 BAC RP11-381H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82883 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 agacccaagcagggcacactgtac 164 |||||||||||| ||||||||||| Sbjct: 20379 agacccaagcagtgcacactgtac 20356
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcggtgac 582 ||||| |||||||||||||||||| Sbjct: 11499 tggcgacacgacgacggcggtgac 11476
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 85273 acgccgccgccgccgccacgccgc 85296
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccgcggccgccacgccgctg 281 |||||||||||||||||||| Sbjct: 610583 ccgcggccgccacgccgctg 610602
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 cgacgacggcggtgaccgtg 586 |||||||||||||||||||| Sbjct: 75963 cgacgacggcggtgaccgtg 75982
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 38395 acgccgccgccgccgccacgccgc 38418
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 4011 acgccgccgccgccgccacgccgc 4034
>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0455A11 Length = 158629 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 113711 acgccgccgccgccgccacgccgc 113734
>dbj|AK110497.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-D01, full insert sequence Length = 3058 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tgcagctgcagcaaagacag 367 |||||||||||||||||||| Sbjct: 945 tgcagctgcagcaaagacag 964
>dbj|AK107643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F04, full insert sequence Length = 2051 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 cgacgacggcggtgaccgtg 586 |||||||||||||||||||| Sbjct: 9 cgacgacggcggtgaccgtg 28
>dbj|AK099684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A20, full insert sequence Length = 1406 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 cgccgccgcggccgccacgccgct 280 ||||||||| |||||||||||||| Sbjct: 73 cgccgccgccgccgccacgccgct 96
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 cggcggtgaccgtgtcgctg 592 |||||||||||||||||||| Sbjct: 4346303 cggcggtgaccgtgtcgctg 4346284
>dbj|AP006198.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-410D4, complete sequence Length = 139671 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tgcccagcagcagacccaagcagg 153 ||||||| |||||||||||||||| Sbjct: 66739 tgcccagaagcagacccaagcagg 66762
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 559 tggcggcacgacgacggcggtgac 582 ||||| |||||||||||||||||| Sbjct: 13549839 tggcgacacgacgacggcggtgac 13549816
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 acgccgccgcggccgccacgccgc 279 |||||||||| ||||||||||||| Sbjct: 8164537 acgccgccgccgccgccacgccgc 8164514
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 cgccgccgcggccgccacgccgct 280 ||||||||| |||||||||||||| Sbjct: 19407783 cgccgccgccgccgccacgccgct 19407806
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 tccatgcgtgcttgacgatc 541 |||||||||||||||||||| Sbjct: 230822 tccatgcgtgcttgacgatc 230803
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 cgccgccgcggccgccacgccgct 280 ||||||||| |||||||||||||| Sbjct: 159264 cgccgccgccgccgccacgccgct 159287
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 cgccgccgcggccgccacgccgct 280 ||||||||| |||||||||||||| Sbjct: 13751 cgccgccgccgccgccacgccgct 13774
>gb|AF005899.1|AF005899 Salmonella gallinarum virulence plasmid minor fimbrial subunit genes, complete cds Length = 3252 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 atggcggcacgacgacggcg 577 |||||||||||||||||||| Sbjct: 1983 atggcggcacgacgacggcg 2002
>gb|BC108462.1| Xenopus laevis hypothetical protein MGC79060, mRNA (cDNA clone MGC:130736 IMAGE:7976412), complete cds Length = 2736 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cagaagttgcagctgcagca 360 |||||||||||||||||||| Sbjct: 1878 cagaagttgcagctgcagca 1859
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ccgccgcggccgccacgccg 278 |||||||||||||||||||| Sbjct: 2677509 ccgccgcggccgccacgccg 2677528
>dbj|AP002530.2| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 3/4 Length = 300000 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tgcccagcagcagacccaagcagg 153 ||||||| |||||||||||||||| Sbjct: 152035 tgcccagaagcagacccaagcagg 152058
>dbj|AB042030.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6, complete sequence Length = 111927 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tgcccagcagcagacccaagcagg 153 ||||||| |||||||||||||||| Sbjct: 87059 tgcccagaagcagacccaagcagg 87082 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,273,870 Number of Sequences: 3902068 Number of extensions: 5273870 Number of successful extensions: 121743 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118431 Number of HSP's gapped (non-prelim): 3310 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)