ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal36g18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 223 tcatctacgatgggcgcaccggctgctgctgcgtgatgcagtgtatgttgccacctccca 282 |||||||||| ||||| || ||||||||||||||||||||||||||||| || ||| ||| Sbjct: 11089 tcatctacgacgggcgtacaggctgctgctgcgtgatgcagtgtatgtttccccctgcca 11030 Query: 283 gcacgatctccctcgcgccctccaccatcacaacct 318 |||||||||| || ||||| ||||||||||| |||| Sbjct: 11029 gcacgatctctcttgcgccttccaccatcaccacct 10994 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 494 ctcttccttcgtgatgtacagaggccctggcacgtggatcttcac 538 ||||||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 10553 ctcttcctttgtcatgtacagaggccctgggacgtggattttcac 10509
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 223 tcatctacgatgggcgcaccggctgctgctgcgtgatgcagtgtatgttgccacctccca 282 |||||||||| ||||| || ||||||||||||||||||||||||||||| || ||| ||| Sbjct: 23293592 tcatctacgacgggcgtacaggctgctgctgcgtgatgcagtgtatgtttccccctgcca 23293533 Query: 283 gcacgatctccctcgcgccctccaccatcacaacct 318 |||||||||| || ||||| ||||||||||| |||| Sbjct: 23293532 gcacgatctctcttgcgccttccaccatcaccacct 23293497 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 494 ctcttccttcgtgatgtacagaggccctggcacgtggatcttcac 538 ||||||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 23293056 ctcttcctttgtcatgtacagaggccctgggacgtggattttcac 23293012 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 10825089 agattatatctatcggccgg 10825070 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 10448296 agattatatctatcggccgg 10448315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 10448206 agattatatctatcggccgg 10448225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 9513922 agattatatctatcggccgg 9513903 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 8868763 agattatatctatcggccgg 8868744
>ref|XM_472798.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1233 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 417 aagttcacatacgaggcggccaatctcttgcccggtaccctcggtacagcatgccccgtt 476 ||||| || |||||||| ||||||||| |||| ||| ||||||||| ||||||| | ||| Sbjct: 956 aagtttacgtacgaggcagccaatctcgtgcctggttccctcggtatagcatgctctgtt 897 Query: 477 gcaagaacaccgtccccctcttccttcgtgatgtacagaggccctggcacgtggatcttc 536 | |||||| || ||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 896 tttacaacaccctctgactcttcctttgtcatgtacagaggccctgggacgtggattttc 837 Query: 537 ac 538 || Sbjct: 836 ac 835
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 242 cggctgctgctgcgtgatgcagtgtatgttgccacctcccagcacgatctc 292 |||||||||||| ||||||||||| |||||||| || || |||| |||||| Sbjct: 1355884 cggctgctgctgggtgatgcagtggatgttgccgccaccgagcaggatctc 1355934
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 ccggctgctgctgcgtgatgcagtg 265 ||||||||||||||||| ||||||| Sbjct: 1756228 ccggctgctgctgcgtggtgcagtg 1756204
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 ccggctgctgctgcgtgatgcagtg 265 |||||||||||||||| |||||||| Sbjct: 2333075 ccggctgctgctgcgtcatgcagtg 2333099
>gb|DQ189087.1| Capra hircus vitronectin mRNA, partial cds Length = 1332 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gctgcgggcgcggccgcggcc 147 ||||||||||||||||||||| Sbjct: 1104 gctgcgggcgcggccgcggcc 1084
>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence Length = 240379 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 atcgccgaaggccggcgctat 394 ||||||||||||||||||||| Sbjct: 126162 atcgccgaaggccggcgctat 126142
>emb|AL844532.18| Mouse DNA sequence from clone RP23-221O14 on chromosome 2, complete sequence Length = 207432 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cattcattcacccccaaaccc 187 ||||||||||||||||||||| Sbjct: 95346 cattcattcacccccaaaccc 95326
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 ccggctgctgctgcgtgatgcagtg 265 ||||||||||||| ||||||||||| Sbjct: 4940061 ccggctgctgctgggtgatgcagtg 4940037
>gb|L13764.1|MOTACTINX Manduca sexta actin mRNA, complete cds Length = 1369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 ccctcgcgccctccaccatca 312 ||||||||||||||||||||| Sbjct: 1005 ccctcgcgccctccaccatca 1025
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 gcaccggctgctgctgcgtgatgc 261 ||||| |||||||||||||||||| Sbjct: 1563009 gcacccgctgctgctgcgtgatgc 1562986
>ref|XM_462939.1| Oryza sativa (japonica cultivar-group), mRNA Length = 6822 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 5053 agattatatctatcggccgg 5072
>ref|XM_471362.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3819 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 2710 agattatatctatcggccgg 2729 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 2620 agattatatctatcggccgg 2639
>gb|AY360384.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0079I01, complete sequence Length = 178920 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 28847 agattatatctatcggccgg 28866
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 25168 agattatatctatcggccgg 25149
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 109132 agattatatctatcggccgg 109113
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 42201 agattatatctatcggccgg 42182
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 7896 agattatatctatcggccgg 7915
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 20089812 agattatatctatcggccgg 20089831
>gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete sequence Length = 196954 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcgccgaaggccggcgctat 394 |||||||||||||||||||| Sbjct: 51707 tcgccgaaggccggcgctat 51688
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 gcaccggctgctgctgcgtgatgc 261 ||||| |||||||||||||||||| Sbjct: 145107 gcacccgctgctgctgcgtgatgc 145130
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cggctgctgctgcgtgatgcagtg 265 |||||| ||||||||||||||||| Sbjct: 41721 cggctgttgctgcgtgatgcagtg 41698
>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06, complete sequence Length = 127420 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 53072 agattatatctatcggccgg 53053
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 75562 agattatatctatcggccgg 75543
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 112040 agattatatctatcggccgg 112021
>gb|AC124591.4| Mus musculus BAC clone RP23-136G17 from chromosome 8, complete sequence Length = 201039 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 atcattcattcacccccaaa 184 |||||||||||||||||||| Sbjct: 129830 atcattcattcacccccaaa 129811
>gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chromosome 7, complete sequence Length = 186886 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tcgccgaaggccggcgctat 394 |||||||||||||||||||| Sbjct: 28595 tcgccgaaggccggcgctat 28614
>ref|XM_935814.1| PREDICTED: Homo sapiens hypothetical protein LOC641764 (LOC641764), mRNA Length = 1209 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcgccgaaggccggcgctat 394 |||||||||||||||||||| Sbjct: 411 tcgccgaaggccggcgctat 392
>ref|XM_944045.1| PREDICTED: Homo sapiens hypothetical protein LOC650092 (LOC650092), mRNA Length = 1209 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcgccgaaggccggcgctat 394 |||||||||||||||||||| Sbjct: 411 tcgccgaaggccggcgctat 392
>ref|XM_932320.1| PREDICTED: Homo sapiens hypothetical protein LOC644710 (LOC644710), mRNA Length = 1209 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcgccgaaggccggcgctat 394 |||||||||||||||||||| Sbjct: 411 tcgccgaaggccggcgctat 392
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tattcaatattctcaagatt 88 |||||||||||||||||||| Sbjct: 679681 tattcaatattctcaagatt 679662
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 14846382 agattatatctatcggccgg 14846363 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 14369852 agattatatctatcggccgg 14369871
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 11785753 agattatatctatcggccgg 11785772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 10575758 agattatatctatcggccgg 10575777
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 3376415 agattatatctatcggccgg 3376434 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 2840038 agattatatctatcggccgg 2840019
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 13674892 agattatatctatcggccgg 13674873
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 15095587 agattatatctatcggccgg 15095568 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 13841326 agattatatctatcggccgg 13841345
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 20082840 agattatatctatcggccgg 20082859
>emb|BX842602.1|OSJN00295 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1234D02, complete sequence Length = 134041 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 127560 agattatatctatcggccgg 127579 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 127470 agattatatctatcggccgg 127489
>emb|AL663009.3|OSJN00210 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0052B05, complete sequence Length = 144687 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 63618 agattatatctatcggccgg 63637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 63528 agattatatctatcggccgg 63547
>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete sequence Length = 217260 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcgccgaaggccggcgctat 394 |||||||||||||||||||| Sbjct: 94242 tcgccgaaggccggcgctat 94223
>gb|AF275632.1|AF275632 Phanerochaete chrysosporium lipC/lipB intergenic region Length = 14601 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atatctatcggccggcggtt 108 |||||||||||||||||||| Sbjct: 9375 atatctatcggccggcggtt 9394
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 cggctgctgctgcgtgatgcagtg 265 |||||||||||| ||||||||||| Sbjct: 3329622 cggctgctgctgggtgatgcagtg 3329645
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 92347 agattatatctatcggccgg 92366
>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017O03 Length = 180651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 31030 agattatatctatcggccgg 31011
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 101491 agattatatctatcggccgg 101472
>dbj|AP005690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0052I14 Length = 168285 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 126490 agattatatctatcggccgg 126509
>dbj|AP005407.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0019N02 Length = 152373 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 132338 agattatatctatcggccgg 132319
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03 Length = 150486 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 44896 agattatatctatcggccgg 44915
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 11864164 agattatatctatcggccgg 11864183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 10647302 agattatatctatcggccgg 10647321
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 14800665 agattatatctatcggccgg 14800646 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 14324134 agattatatctatcggccgg 14324153
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 73504 agattatatctatcggccgg 73523
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 agattatatctatcggccgg 103 |||||||||||||||||||| Sbjct: 77056 agattatatctatcggccgg 77075
>gb|AC114897.43| Mus musculus strain C57BL/6J clone rp23-158e11 map 8, complete sequence Length = 202175 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 atcattcattcacccccaaa 184 |||||||||||||||||||| Sbjct: 130496 atcattcattcacccccaaa 130477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,341,225 Number of Sequences: 3902068 Number of extensions: 4341225 Number of successful extensions: 74946 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74112 Number of HSP's gapped (non-prelim): 834 length of query: 545 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 522 effective length of database: 17,143,297,704 effective search space: 8948801401488 effective search space used: 8948801401488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
