>TAT_HV1SC (P05906) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 79  DVRLNWLPHAGWKKTAWTSGCFQCHACSAIGQGRTRTTGLGIFHGGQRRR 228
           D RL    H G +  A  + C+ C  C    Q    T GLGI +G ++RR
Sbjct: 5   DPRLEPWKHPGSQPKAACTSCY-CKKCCFHCQVCFTTKGLGISYGRKKRR 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,925,858
Number of Sequences: 219361
Number of extensions: 813401
Number of successful extensions: 1914
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)