ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3) 29 5.5
2ESL2_MYCGE (Q49418) Putative esterase/lipase 2 (EC 3.1.-.-) 28 9.4

>OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)|
          Length = 338

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 248 CRLTTVELA*NSWIRAALAGPTHGSRSPHNSSSGHVSFPSSLSS 379
           CR    + + NS IR A   P+    SP + SSGH + P+  SS
Sbjct: 93  CRQQQQQSSTNSKIRPAKKKPSPSRESPGSESSGHFTPPAVSSS 136



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>ESL2_MYCGE (Q49418) Putative esterase/lipase 2 (EC 3.1.-.-)|
          Length = 268

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 243 GHCPHDEAPEQFNAALLQWLASLEEE 166
           GH PHD AP+ F   +L++L +L+++
Sbjct: 241 GHSPHDSAPKLFFDYVLEFLDNLKKQ 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,973,253
Number of Sequences: 219361
Number of extensions: 575057
Number of successful extensions: 2177
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2177
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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