ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35p17 |
|---|---|
| Clone Library Name | barley_pub |
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 995 Score = 35.0 bits (79), Expect = 0.043 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 5/94 (5%) Frame = +1 Query: 109 DARVDDPGRVSHDAAALAVAEQVHHRAHRPLYDAGHHERQEPQRRPDE--LAP---ARVL 273 D DDP R +A + + + H+ Y A H+ P RRP AP A L Sbjct: 687 DDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASRHD--PPPRRPPAPTTAPGPAAPAL 744 Query: 274 PRPALHARRERHGYTFLLSAEPVPCRPSSLLPVM 375 P + RR R Y + P P + +PV+ Sbjct: 745 TAPPVRTRRRRKLYELPAAGAPPPAAGPAPVPVV 778
>SYL_MYCLE (Q50192) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 972 Score = 32.3 bits (72), Expect = 0.28 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +1 Query: 94 GDGPGDARVDDPGRVSH--DAAALAVAEQVHHRA-HRPLYDAGHHERQEPQRR 243 G P + +DDPG V A AV ++ R H+ LYD GH +EP RR Sbjct: 640 GPRPTEHGIDDPGGVDLYVGGAEHAVLHLLYARFWHKVLYDLGHVSSREPYRR 692
>SYL_MYCTU (P67510) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 969 Score = 31.6 bits (70), Expect = 0.48 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +1 Query: 94 GDGPGDARVDDPGRVSH--DAAALAVAEQVHHRA-HRPLYDAGHHERQEPQRR 243 G P + DDPG V A AV ++ R H+ LYD GH +EP RR Sbjct: 638 GPRPAEHGPDDPGGVDLYVGGAEHAVLHLLYSRFWHKVLYDLGHVSSREPYRR 690
>SYL_MYCBO (P67511) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 969 Score = 31.6 bits (70), Expect = 0.48 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +1 Query: 94 GDGPGDARVDDPGRVSH--DAAALAVAEQVHHRA-HRPLYDAGHHERQEPQRR 243 G P + DDPG V A AV ++ R H+ LYD GH +EP RR Sbjct: 638 GPRPAEHGPDDPGGVDLYVGGAEHAVLHLLYSRFWHKVLYDLGHVSSREPYRR 690
>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide HQ-34; Peptide KR-11] Length = 668 Score = 30.4 bits (67), Expect = 1.1 Identities = 24/94 (25%), Positives = 39/94 (41%) Frame = +1 Query: 22 AQTHRLQHTHREGLD*VRMKLGLDGDGPGDARVDDPGRVSHDAAALAVAEQVHHRAHRPL 201 A+TH + + +E + + G PG+ G+ + + + + +V R RP Sbjct: 222 AKTHSRERSSQESGE----ETGSQDAAPGEPESPPEGQEAPEESQEDASLEVDKRRWRPR 277 Query: 202 YDAGHHERQEPQRRPDELAPARVLPRPALHARRE 303 + HH R P R P E +P P H R E Sbjct: 278 H---HHGRSRPDRAPQEGSPP---PEERGHPREE 305
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 30.0 bits (66), Expect = 1.4 Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 11/101 (10%) Frame = +1 Query: 91 DGDGPGDARVDDPGRVSHDAAALAVAEQV---HHRAHRPLYDAGHHERQEPQ-------R 240 DG P D R + + +AAL A HH H P HH P Sbjct: 979 DGPSPPDTRGGGREKSLYHSAALPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGG 1038 Query: 241 RPDELAPARVL-PRPALHARRERHGYTFLLSAEPVPCRPSS 360 PD+ P L P+P+L R R G S P P SS Sbjct: 1039 SPDDPPPRLALGPQPSL--RGWRGGGPSPTSGAPSPSHHSS 1077
>DISC_DROME (P23792) Protein disconnected| Length = 568 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 169 EQVHHRAHRPLYDAGHHERQEPQRRPDELAPA 264 EQ HH H + HH Q Q++P + +PA Sbjct: 529 EQHHHLGHHHMGHHHHHHHQHHQQQPQQQSPA 560
>OXR1_CRYNE (Q5KF46) Oxidation resistance protein 1| Length = 465 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +1 Query: 202 YDAGHHERQEPQRRPDELAPARVLPRPALHARRERHGYTFLLSAEP 339 ++A H R EP P P VLP HAR R TF S P Sbjct: 69 HNAEEHRRPEPTYSPRS-RPTGVLPESVPHARSPRRLSTFSSSTSP 113
>NAGZ_AZOSE (Q5P081) Beta-hexosaminidase (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 356 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Frame = -1 Query: 171 FRHRKGRRIMG-HPARVVYPRV 109 +RHR GR++ G PA V+YPRV Sbjct: 214 YRHRLGRQLAGVMPAHVIYPRV 235
>AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen regulator nre)| Length = 725 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/74 (25%), Positives = 30/74 (40%) Frame = +2 Query: 95 GMALETRG*TTLAGCPMMRRPLRWRNRYTTAPTGHSTTPVTTNARNPSVGPMNLHRHGFS 274 G + +TR T+ M+ PL W N+ T H + + RN + P + Sbjct: 405 GFSAQTRKHVTIGSTDMIDGPLEW-NQGGTLGRAHGSAASVSEVRNQNQDPRR-----YG 458 Query: 275 RVPHCTHAGNAMAI 316 +VP NA A+ Sbjct: 459 KVPRTASTPNAAAL 472
>GFRA4_HUMAN (Q9GZZ7) GDNF family receptor alpha-4 precursor (GFR-alpha-4)| (Persephin receptor) Length = 299 Score = 28.9 bits (63), Expect = 3.1 Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Frame = +2 Query: 134 GCPMMRRPLRWRNRYTTAPTGHSTTPVTTNARN--PSVGPMNLHRHGFSRVPHCTHAGNA 307 GCP R R + P P T+A P GP R + VP C +G Sbjct: 58 GCPRARCRRALRRFFARGP------PALTHALLFCPCAGPACAERRRQTFVPSCAFSGPG 111 Query: 308 MAIPSC-*VLNLCPVGR 355 A PSC LN C R Sbjct: 112 PAPPSCLEPLNFCERSR 128
>WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 665 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 3/29 (10%) Frame = +1 Query: 91 DGDGPGDARV---DDPGRVSHDAAALAVA 168 DGDG GDA DDPG DAA A A Sbjct: 171 DGDGDGDADADGEDDPGHWDADAAEAATA 199
>NAS14_CAEEL (Q19269) Zinc metalloproteinase nas-14 precursor (EC 3.4.24.21)| (Nematode astacin 14) Length = 503 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Frame = +2 Query: 179 TTAPTGHSTTPVTTN------ARNPSVGPMNLHRHGFSRVPHCTHAGNAMAIPSC*VLNL 340 TT T TT TT +RN +N H + ++ HC H+ MA NL Sbjct: 354 TTTTTKKPTTTTTTTPKPVERSRNKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNL 413 Query: 341 CPV 349 C V Sbjct: 414 CEV 416
>SYL_MYCPA (Q744V3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 969 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +1 Query: 94 GDGPGDARVDDPGRVSH--DAAALAVAEQVHHRA-HRPLYDAGHHERQEPQRR 243 G P + DPG V A AV ++ R H+ LYD GH +EP RR Sbjct: 636 GPRPAEHGPQDPGGVDLYVGGAEHAVLHLLYARFWHKVLYDLGHVSSREPYRR 688
>HEMH_MYCAV (O07401) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 335 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 5/78 (6%) Frame = +1 Query: 94 GDGPGDARVDDPGRVSHDAAALAVAEQVHHRAHRPLYDAGHHERQEPQRRPDELA----- 258 G G +R R S AAA + R P + G + Q Q R D A Sbjct: 12 GGPEGPSRFGRSWRTSPGAAACRGTSRPRRRT-LPAFRRGVAD-QRHQPRADRAAAGRPE 69 Query: 259 PARVLPRPALHARRERHG 312 PAR+L +P L A R RHG Sbjct: 70 PARLLRQPQLGALRRRHG 87
>MA2B2_HUMAN (Q9Y2E5) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1009 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 307 GVPGVRAVRDAGEPVPVQVHRA 242 G PGVR +AG PVP Q+ + Sbjct: 496 GFPGVRVTDEAGHPVPSQIQNS 517
>GUAA_HAEDU (Q7VLE9) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 523 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/76 (25%), Positives = 31/76 (40%) Frame = +2 Query: 170 NRYTTAPTGHSTTPVTTNARNPSVGPMNLHRHGFSRVPHCTHAGNAMAIPSC*VLNLCPV 349 ++ T P G TT VT ++ +G P TH + +A+ + V N+C Sbjct: 143 DKVTRLPAGFQTTAVTPTCPIAAMSDEKRRFYGVQFHPEVTHTKSGLALLTNFVENICGC 202 Query: 350 GRALCFQLWWTDGRMI 397 R+ WT +I Sbjct: 203 ARS------WTPENII 212
>YMG9_YEAST (Q04636) Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic| region Length = 552 Score = 28.5 bits (62), Expect = 4.0 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%) Frame = +1 Query: 7 LLRQYAQTH--RLQHTHREGLD*VRMKLGLDGD---------GPGDARVDDPGRVSHDAA 153 LL Q+ ++ R+++ RE + ++ LG D D G D VD+ +VS D Sbjct: 460 LLEQFLKSKNLRVKNEDREVQERLQTALGSDSDEEDINMGSAGEDDESVDEDFQVSSDND 519 Query: 154 ALAVAEQVHHRAHRPLYDA-GHHERQEPQRRP 246 A VAE+ A L DA G + + P ++P Sbjct: 520 ADEVAEEFDSDA--ALSDAEGGSDEERPSKKP 549
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +1 Query: 223 RQEPQRRPDELAPARVLPRPALHARRERHGYTFLLSAEPVP-CRPSSLLP 369 RQ+P+ RP PAR P PA +R H Y L P P RPS P Sbjct: 144 RQDPRERPGRRPPAR-SPPPASAVQRVHHVYPAL----PTPLLRPSRRPP 188
>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)| Length = 2414 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 Query: 124 DPGRVSHDAAALAVAEQVHHRAHRPLYDAGHHERQEPQRRPDELAP 261 DP + AAL + QV+ +P A + + Q+P + P + P Sbjct: 460 DPSSIERAYAALGLPYQVNQMPTQPQVQAKNQQNQQPGQSPQGMRP 505
>EPL1_SCHPO (Q9UU94) Enhancer of polycomb-like protein 1| Length = 557 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +1 Query: 232 PQRRPDELAPARVLPRPALHARRERHGYTFLLSAEPVPCRPSSLLPVMV 378 P+RRP E+ PA +P PA + H ++ P P R + P+++ Sbjct: 316 PKRRPIEVKPAAPVPTPAPPVKTSPHPASY----RPQPTRNVEVRPLLM 360
>GUAA_MANSM (Q65UI1) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 523 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/58 (24%), Positives = 27/58 (46%) Frame = +2 Query: 170 NRYTTAPTGHSTTPVTTNARNPSVGPMNLHRHGFSRVPHCTHAGNAMAIPSC*VLNLC 343 ++ T P G T T+ ++ + H +G P TH + +A+ + V+N+C Sbjct: 143 DKVTRLPEGFQLTGTTSTCPIAAMSDESRHFYGVQFHPEVTHTKSGLALLTNFVVNIC 200
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 11/81 (13%) Frame = +1 Query: 91 DGDGPGDARVDDPGRVSHDAAALAVAEQV---HHRAHRPLYDAGHHERQEPQ-------R 240 DG P D RV + + + L A HH H P HH P Sbjct: 971 DGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGG 1030 Query: 241 RPDELAPARVL-PRPALHARR 300 PD+ P L P+P+L R Sbjct: 1031 SPDDPPPRLALGPQPSLRGWR 1051
>DPH2_ASPFU (Q4WN99) Diphthamide biosynthesis protein 2| Length = 565 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 280 PALHARRERHGYTFLLSAEPVPCRPSSLLP 369 PA++AR GYT L + E + C PSS +P Sbjct: 211 PAVYARLMEEGYTNLYATELIHC-PSSAIP 239
>TRMB_MYCPA (Q73TS5) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 259 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%) Frame = +1 Query: 196 PLYDAGHHERQEPQRRPDELAPARVLPRPALHARRERHGYTFLL----SAEP--VPCRPS 357 P A HH+R+ Q L R+LP LH + GY + + EP P P Sbjct: 167 PWPKARHHKRRFLQPGTVGLIADRLLPGGVLHVATDHAGYAEHIADVGAGEPRLRPANPD 226 Query: 358 SLLPVMV 378 S LP+ V Sbjct: 227 SPLPISV 233
>BNC1_MOUSE (O35914) Zinc finger protein basonuclin-1| Length = 961 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Frame = +2 Query: 125 TLAGCPMMRRPLRWRNRYTTAPTGHSTTPVTTNARNPSV-GPMNL------HRHGFSRV- 280 T+ GC M+ LR RNR++ P P+ N R+ + +NL R GF+ V Sbjct: 356 TIEGCNMVFSSLRSRNRHSANPNPRLHMPMNRNNRDKDLRNSLNLASSETYKRPGFTVVS 415 Query: 281 PHC 289 P C Sbjct: 416 PDC 418
>KLK15_SAGOE (Q7JIG6) Kallikrein-15 precursor (EC 3.4.21.-)| Length = 255 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 244 PDELAPA-RVLPRPALHARRERHGYTFLLSAEPVPCRPSSLLPVMVDGR 387 P++L A RV+P P AR RH L +P P + PV++ R Sbjct: 82 PEQLRTASRVIPHPRYEARSHRHDIMLLRLVQPARLTP-QVRPVVLPTR 129
>BNC1_HUMAN (Q01954) Zinc finger protein basonuclin-1| Length = 994 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +2 Query: 125 TLAGCPMMRRPLRWRNRYTTAPTGHSTTPVTTNARN 232 T+ GC M+ LR RNR++ P P+ N R+ Sbjct: 388 TIEGCNMVFSSLRSRNRHSANPNPRLHMPMNRNNRD 423
>PHYA_POPTM (O49934) Phytochrome A| Length = 1125 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 264 CRCKFIGPTLGFLAFVVTGVVEWPVGAVVYLFRHRKGRRI 145 CRC+ I G L V + PVGA++++ H RI Sbjct: 1016 CRCQLILTPSGGLLTVSASFFQRPVGAILFILVHSGKLRI 1055
>Y102_BACHD (Q9KGG3) Putative ATP:guanido phosphotransferase BH0102 (EC| 2.7.3.-) Length = 356 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 15/76 (19%) Frame = -1 Query: 261 RCKFIGPTLGFLAFVVTGVVEWPVGAVVYLFRHRKG--------------RRIMGH-PAR 127 +C F G L + +G+ +W G V Y F ++G +M H PA Sbjct: 127 QCLFPGFQLSEALVLASGIDDWIEGKVDYAFDEKRGYLTSCPTNVGTGLRASVMMHLPAL 186 Query: 126 VVYPRVSRAIPI*SQL 79 V+ +++R +P +QL Sbjct: 187 VMTQQINRILPAINQL 202
>WEE1_HUMAN (P30291) Wee1-like protein kinase (EC 2.7.10.2) (WEE1hu)| Length = 646 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 137 TRPGSSTRASPGPSPSNP 84 T PG R SPGP+P +P Sbjct: 69 TEPGPERRRSPGPAPGSP 86
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 8/58 (13%) Frame = +1 Query: 94 GDGPGDARVDDPGRVSHDAAALAV---AEQVH----HRAHRPLYD-AGHHERQEPQRR 243 G GPG + PG S A A+ Q H H H AG H++Q PQ + Sbjct: 1228 GTGPGPGQGPGPGAASGGAGAVGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQ 1285
>YGEP_ECOLI (Q46796) Hypothetical protein ygeP| Length = 99 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = +1 Query: 4 NLLRQYAQTHRLQHTHREGLD*VRMKLGLDGDGPGDARVDDPGRVSHDAAALAV 165 N L + T RL H +G + + ++L L G+ PG D R + DAA L V Sbjct: 30 NELDETLSTTRLNHLIDKGYERITLQLDLGGESPGYLEKDKHYREA-DAALLNV 82
>VG68_BPMD2 (O64260) Gene 68 protein (Gp68)| Length = 77 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +1 Query: 166 AEQVHHRAHRPLYDAG 213 AEQ HRA RP++DAG Sbjct: 58 AEQAAHRAGRPIHDAG 73
>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)| Length = 1861 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 231 TPASAR*TCTGTGSPASRTARTPGTP 308 TP + T G+P S ++RTPGTP Sbjct: 1598 TPTTPGSTAITPGTPPSYSSRTPGTP 1623
>CKR1_CHICK (P30373) Zinc finger protein CKR1| Length = 509 Score = 27.3 bits (59), Expect = 9.0 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 12/73 (16%) Frame = +1 Query: 130 GRVSHDAA----------ALAVAEQVHHRAHRPLYD--AGHHERQEPQRRPDELAPARVL 273 G V+H AA A+ E H H P + AG H R+ +RPD+ AP V Sbjct: 32 GLVNHKAAEEDAVGLKEDAVGSEEPQTHPPHNPAQNRTAGSHRRKA--KRPDKAAPLGVA 89 Query: 274 PRPALHARRERHG 312 P +R G Sbjct: 90 QTPPAAPTPKRDG 102
>BNC2_HUMAN (Q6ZN30) Zinc finger protein basonuclin-2| Length = 1099 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 134 GCPMMRRPLRWRNRYTTAPTGHSTTPVTT 220 GC MM +R RNR++ P H P T+ Sbjct: 1069 GCNMMFSSVRSRNRHSQNPNLHKNIPFTS 1097 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +2 Query: 125 TLAGCPMMRRPLRWRNRYTTAPTGHSTTPVTTNARN 232 T+ GC M+ LR RNR++ P P+ N R+ Sbjct: 472 TIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRD 507
>MAP2_MOUSE (P20357) Microtubule-associated protein 2 (MAP 2)| Length = 1828 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 231 TPASAR*TCTGTGSPASRTARTPGTP 308 TP + T G+P S ++RTPGTP Sbjct: 1596 TPTTPGSTAITPGTPPSYSSRTPGTP 1621
>MAP2_HUMAN (P11137) Microtubule-associated protein 2 (MAP 2) (MAP-2)| Length = 1827 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 231 TPASAR*TCTGTGSPASRTARTPGTP 308 TP + T G+P S ++RTPGTP Sbjct: 1592 TPTTPGSTAITPGTPPSYSSRTPGTP 1617
>C4BB_HUMAN (P20851) C4b-binding protein beta chain precursor| Length = 252 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +2 Query: 164 WRNRYTTAPTGHSTTPVTTNARNPSVGPMNL 256 W N T GH PV N S GP+N+ Sbjct: 69 WDNTTTECRLGHCPDPVLVNGEFSSSGPVNV 99
>ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 protein) (Nesprin| homolog) Length = 8545 Score = 27.3 bits (59), Expect = 9.0 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 5/70 (7%) Frame = +1 Query: 61 LD*VRMKLGLDGDGPGDARVDDPGRVSHDA-----AALAVAEQVHHRAHRPLYDAGHHER 225 LD R G D P D +DD GR + A AALA A L D + Sbjct: 4370 LDITREDGGDDNKSP-DELIDDRGRSTGSAVGDKLAALAAFNAARKNAEDALLDITREDG 4428 Query: 226 QEPQRRPDEL 255 + + PDEL Sbjct: 4429 GDDNKSPDEL 4438
>NR4A3_RAT (P51179) Orphan nuclear receptor NR4A3 (Nuclear hormone receptor| NOR-1/NOR-2) (Neuron-derived orphan receptor 1/2) Length = 628 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/41 (26%), Positives = 20/41 (48%) Frame = +1 Query: 178 HHRAHRPLYDAGHHERQEPQRRPDELAPARVLPRPALHARR 300 HH H + HH++Q+P P VLP +++ ++ Sbjct: 99 HHHHHHHHHHHHHHQQQQPSIPPPSGPEDEVLPSTSMYFKQ 139
>CAPP_NEIG1 (Q5F5A9) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 900 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = +1 Query: 148 AAALAVAEQVHHRAHRPLY-DAGHHERQEPQRRPDELAPARVLPRPALHARRERHGYTFL 324 A L +AE VHH R ++ DAGH+ + A ++ + + T + Sbjct: 77 AQILNIAEDVHHERRRQIHEDAGHNAAEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAV 136 Query: 325 LSAEPVPCRPSSLL 366 L+A P + ++L Sbjct: 137 LTAHPTEVQRQTVL 150
>BNC2_MOUSE (Q8BMQ3) Zinc finger protein basonuclin-2| Length = 1127 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 134 GCPMMRRPLRWRNRYTTAPTGHSTTPVTT 220 GC MM +R RNR++ P H P T+ Sbjct: 1097 GCNMMFSSVRSRNRHSQNPNLHKNIPFTS 1125 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +2 Query: 125 TLAGCPMMRRPLRWRNRYTTAPTGHSTTPVTTNARN 232 T+ GC M+ LR RNR++ P P+ N R+ Sbjct: 500 TIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRD 535
>YJGJ_ECOLI (P39334) Putative HTH-type transcriptional regulator yjgJ| Length = 197 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 139 SHDAAALAVAEQVHHRAHRPLYDAGHHERQEPQR 240 SHD A +A Q +H A +YD + R+ PQR Sbjct: 121 SHDPQARDIAVQYYHAAETTIYD--YIARRHPQR 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,514,214 Number of Sequences: 219361 Number of extensions: 1231742 Number of successful extensions: 4541 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 4259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4532 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
