ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal35p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY549310.1| Oryza sativa (japonica cultivar-group) little pro... 204 2e-49
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
3dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
4dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
5dbj|AK063634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
6gb|AF152397.2| Mycobacterium phlei alkanal monooxygenase-like pr... 46 0.086
7gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, comp... 44 0.34
8gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome... 44 0.34
9gb|AC154265.2| Mus musculus BAC clone RP24-319O20 from 16, compl... 44 0.34
10gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, com... 44 0.34
11gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 1.4
12ref|NM_021515.1| Mus musculus adenylate kinase 1 (Ak1), mRNA 40 5.3
13ref|XM_480300.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
14ref|XM_507146.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.3
15gb|BC054366.1| Mus musculus adenylate kinase 1, mRNA (cDNA clone... 40 5.3
16gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 5.3
17emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 5.3
18gb|BC014802.1| Mus musculus adenylate kinase 1, mRNA (cDNA clone... 40 5.3
19emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on ch... 40 5.3
20emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O... 40 5.3
21emb|AJ010109.1|MMU010109 Mus musculus mRNA for membrane-associat... 40 5.3
22emb|AJ010108.1|MMU010108 Mus musculus mRNA for cytosolic adenyla... 40 5.3
23gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.3
24dbj|AK046613.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 5.3
25dbj|AK089270.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.3
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.3
28gb|AC010874.3|AC010874 Homo sapiens BAC clone RP11-118K2 from Y,... 40 5.3
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.3
30dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
31dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.3
32dbj|AK100902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
33dbj|AK068909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
34emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.3
35emb|BX957317.12| Zebrafish DNA sequence from clone DKEY-150K17 i... 40 5.3
36gb|AY109489.1| Zea mays CL17814_1 mRNA sequence 40 5.3
37gb|AY104458.1| Zea mays PCO099025 mRNA sequence 40 5.3
38emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chr... 40 5.3 
>gb|AY549310.1| Oryza sativa (japonica cultivar-group) little protein 1 (LP1) mRNA,
           complete cds
          Length = 275

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Minus

                                                                       
Query: 86  gattagatggggatggccctggagacgcgcgggtagacgaccctggccgggtgtcccatg 145
           |||||||||||||| || |||| ||  ||||||||||||||  |||||||||| ||||||
Sbjct: 263 gattagatggggatcgcgctggtgatccgcgggtagacgacgttggccgggtgccccatg 204

                                                                       
Query: 146 atgcggcggcccttgcggtggcggaacaggtacaccaccgcgcccaccggccactctacg 205
           |||||||| |||||||||||||||||||||||||| | |||||| | ||||||||| |||
Sbjct: 203 atgcggcgacccttgcggtggcggaacaggtacacgaacgcgccgagcggccactccacg 144

                                                                       
Query: 206 acgccggtcaccacgaacgccaggaaccccagcgtcggcccgatgaacttgcaccggcac 265
           ||||||| |||||||||||||| ||| ||||||||||| ||||  | |||||||| ||||
Sbjct: 143 acgccggccaccacgaacgccacgaaacccagcgtcgggccgagcaccttgcacctgcac 84

                                              
Query: 266 gggttctcccgcgtcccgcactgcacgcacgccgg 300
           |||||     |||||||||||||||||||| ||||
Sbjct: 83  gggttgctgtgcgtcccgcactgcacgcacaccgg 49
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Plus

                                                                            
Query: 86       gattagatggggatggccctggagacgcgcgggtagacgaccctggccgggtgtcccatg 145
                |||||||||||||| || |||| ||  ||||||||||||||  |||||||||| ||||||
Sbjct: 25925081 gattagatggggatcgcgctggtgatccgcgggtagacgacgttggccgggtgccccatg 25925140

                                                                            
Query: 146      atgcggcggcccttgcggtggcggaacaggtacaccaccgcgcccaccggccactctacg 205
                |||||||| |||||||||||||||||||||||||| | |||||| | ||||||||| |||
Sbjct: 25925141 atgcggcgacccttgcggtggcggaacaggtacacgaacgcgccgagcggccactccacg 25925200

                                                                            
Query: 206      acgccggtcaccacgaacgccaggaaccccagcgtcggcccgatgaacttgcaccggcac 265
                ||||||| |||||||||||||| ||| ||||||||||| ||||  | |||||||| ||||
Sbjct: 25925201 acgccggccaccacgaacgccacgaaacccagcgtcgggccgagcaccttgcacctgcac 25925260

                                                   
Query: 266      gggttctcccgcgtcccgcactgcacgcacgccgg 300
                |||||     |||||||||||||||||||| ||||
Sbjct: 25925261 gggttgctgtgcgtcccgcactgcacgcacaccgg 25925295
to top
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0707D10
          Length = 172003

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Plus

                                                                         
Query: 86    gattagatggggatggccctggagacgcgcgggtagacgaccctggccgggtgtcccatg 145
             |||||||||||||| || |||| ||  ||||||||||||||  |||||||||| ||||||
Sbjct: 21148 gattagatggggatcgcgctggtgatccgcgggtagacgacgttggccgggtgccccatg 21207

                                                                         
Query: 146   atgcggcggcccttgcggtggcggaacaggtacaccaccgcgcccaccggccactctacg 205
             |||||||| |||||||||||||||||||||||||| | |||||| | ||||||||| |||
Sbjct: 21208 atgcggcgacccttgcggtggcggaacaggtacacgaacgcgccgagcggccactccacg 21267

                                                                         
Query: 206   acgccggtcaccacgaacgccaggaaccccagcgtcggcccgatgaacttgcaccggcac 265
             ||||||| |||||||||||||| ||| ||||||||||| ||||  | |||||||| ||||
Sbjct: 21268 acgccggccaccacgaacgccacgaaacccagcgtcgggccgagcaccttgcacctgcac 21327

                                                
Query: 266   gggttctcccgcgtcccgcactgcacgcacgccgg 300
             |||||     |||||||||||||||||||| ||||
Sbjct: 21328 gggttgctgtgcgtcccgcactgcacgcacaccgg 21362
to top
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510C12
          Length = 177049

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Plus

                                                                          
Query: 86     gattagatggggatggccctggagacgcgcgggtagacgaccctggccgggtgtcccatg 145
              |||||||||||||| || |||| ||  ||||||||||||||  |||||||||| ||||||
Sbjct: 165005 gattagatggggatcgcgctggtgatccgcgggtagacgacgttggccgggtgccccatg 165064

                                                                          
Query: 146    atgcggcggcccttgcggtggcggaacaggtacaccaccgcgcccaccggccactctacg 205
              |||||||| |||||||||||||||||||||||||| | |||||| | ||||||||| |||
Sbjct: 165065 atgcggcgacccttgcggtggcggaacaggtacacgaacgcgccgagcggccactccacg 165124

                                                                          
Query: 206    acgccggtcaccacgaacgccaggaaccccagcgtcggcccgatgaacttgcaccggcac 265
              ||||||| |||||||||||||| ||| ||||||||||| ||||  | |||||||| ||||
Sbjct: 165125 acgccggccaccacgaacgccacgaaacccagcgtcgggccgagcaccttgcacctgcac 165184

                                                 
Query: 266    gggttctcccgcgtcccgcactgcacgcacgccgg 300
              |||||     |||||||||||||||||||| ||||
Sbjct: 165185 gggttgctgtgcgtcccgcactgcacgcacaccgg 165219
to top
>dbj|AK063634.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F12, full
           insert sequence
          Length = 582

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Minus

                                                                       
Query: 86  gattagatggggatggccctggagacgcgcgggtagacgaccctggccgggtgtcccatg 145
           |||||||||||||| || |||| ||  ||||||||||||||  |||||||||| ||||||
Sbjct: 358 gattagatggggatcgcgctggtgatccgcgggtagacgacgttggccgggtgccccatg 299

                                                                       
Query: 146 atgcggcggcccttgcggtggcggaacaggtacaccaccgcgcccaccggccactctacg 205
           |||||||| |||||||||||||||||||||||||| | |||||| | ||||||||| |||
Sbjct: 298 atgcggcgacccttgcggtggcggaacaggtacacgaacgcgccgagcggccactccacg 239

                                                                       
Query: 206 acgccggtcaccacgaacgccaggaaccccagcgtcggcccgatgaacttgcaccggcac 265
           ||||||| |||||||||||||| ||| ||||||||||| ||||  | |||||||| ||||
Sbjct: 238 acgccggccaccacgaacgccacgaaacccagcgtcgggccgagcaccttgcacctgcac 179

                                              
Query: 266 gggttctcccgcgtcccgcactgcacgcacgccgg 300
           |||||     |||||||||||||||||||| ||||
Sbjct: 178 gggttgctgtgcgtcccgcactgcacgcacaccgg 144
to top
>gb|AF152397.2| Mycobacterium phlei alkanal monooxygenase-like protein gene,
           partial cds; and hypothetical protien,
           beta-lactamase-like protein (bllp), F420-dependent
           glucose-6-phosphate dehydrogenase (fgd), and
           hypothetical proteins genes, complete cds
          Length = 4275

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 167 cggaacaggtacaccaccgcgcccaccggcc 197
           |||||||||| ||||||||||| ||||||||
Sbjct: 266 cggaacaggtgcaccaccgcgcgcaccggcc 236
to top
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence
          Length = 188758

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 323    tgctgagtgctgaacctgtgccctgt 348
              |||||||||||||||||||| |||||
Sbjct: 152261 tgctgagtgctgaacctgtgtcctgt 152286
to top
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence
          Length = 237479

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 38     tacaacatacacacagggaggg 59
              ||||||||||||||||||||||
Sbjct: 234753 tacaacatacacacagggaggg 234732
to top
>gb|AC154265.2| Mus musculus BAC clone RP24-319O20 from 16, complete sequence
          Length = 206136

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 38     tacaacatacacacagggaggg 59
              ||||||||||||||||||||||
Sbjct: 189892 tacaacatacacacagggaggg 189913
to top
>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence
          Length = 161292

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 323   tgctgagtgctgaacctgtgccctgt 348
             |||||||||||||||||||| |||||
Sbjct: 45586 tgctgagtgctgaacctgtgtcctgt 45561
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 172     caggtacaccaccgcgcccac 192
               |||||||||||||||||||||
Sbjct: 1010330 caggtacaccaccgcgcccac 1010350
to top
>ref|NM_021515.1| Mus musculus adenylate kinase 1 (Ak1), mRNA
          Length = 2037

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 866 ctttgcttccagttatggtg 885
to top
>ref|XM_480300.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 151 gcggcccttgcggtggcggaacag 174
           ||||||||||||||||| ||||||
Sbjct: 491 gcggcccttgcggtggccgaacag 468
to top
>ref|XM_507146.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1590_E05.28
           mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 151 gcggcccttgcggtggcggaacag 174
           ||||||||||||||||| ||||||
Sbjct: 494 gcggcccttgcggtggccgaacag 471
to top
>gb|BC054366.1| Mus musculus adenylate kinase 1, mRNA (cDNA clone MGC:62584
           IMAGE:5346232), complete cds
          Length = 2053

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 859 ctttgcttccagttatggtg 878
to top
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    ccaccgcgcccaccggccac 199
              ||||||||||||||||||||
Sbjct: 848265 ccaccgcgcccaccggccac 848246
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    accgcgcccaccggccactc 201
              ||||||||||||||||||||
Sbjct: 299053 accgcgcccaccggccactc 299072
to top
>gb|BC014802.1| Mus musculus adenylate kinase 1, mRNA (cDNA clone MGC:25242
           IMAGE:4505142), complete cds
          Length = 2059

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 837 ctttgcttccagttatggtg 856
to top
>emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on chromosome 10 Contains a
              pseudogene similar to part of glycogen synthase kinase 3
              and a ubiquitin-conjugating enzyme pseudogene, complete
              sequence
          Length = 178942

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    tttgcttccagttatggtgg 379
              ||||||||||||||||||||
Sbjct: 148554 tttgcttccagttatggtgg 148573
to top
>emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O15 on chromosome X Contains a
             ribosomal protein L26 pseudogene, complete sequence
          Length = 183876

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   ttgcttccagttatggtgga 380
             ||||||||||||||||||||
Sbjct: 50847 ttgcttccagttatggtgga 50828
to top
>emb|AJ010109.1|MMU010109 Mus musculus mRNA for membrane-associated adenylate kinase
          Length = 2037

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 866 ctttgcttccagttatggtg 885
to top
>emb|AJ010108.1|MMU010108 Mus musculus mRNA for cytosolic adenylate kinase
          Length = 1956

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 776 ctttgcttccagttatggtg 795
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 277     cgtcccgcactgcacgcacgccgg 300
               |||||||||| |||||||||||||
Sbjct: 2484418 cgtcccgcaccgcacgcacgccgg 2484395
to top
>dbj|AK046613.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430205N08 product:adenylate
           kinase 1, full insert sequence
          Length = 2507

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 912 ctttgcttccagttatggtg 931
to top
>dbj|AK089270.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630110B04
           product:adenylate kinase 1, full insert sequence
          Length = 2062

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 ctttgcttccagttatggtg 378
           ||||||||||||||||||||
Sbjct: 894 ctttgcttccagttatggtg 913
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 151     gcggcccttgcggtggcggaacag 174
               ||||||||||||||||| ||||||
Sbjct: 4206078 gcggcccttgcggtggccgaacag 4206101
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     caccaccgcgcccaccggcc 197
               ||||||||||||||||||||
Sbjct: 8940471 caccaccgcgcccaccggcc 8940490
to top
>gb|AC010874.3|AC010874 Homo sapiens BAC clone RP11-118K2 from Y, complete sequence
          Length = 114045

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   ttgcttccagttatggtgga 380
             ||||||||||||||||||||
Sbjct: 21940 ttgcttccagttatggtgga 21921
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     ggtcaccacgaacgccagga 230
               ||||||||||||||||||||
Sbjct: 4110759 ggtcaccacgaacgccagga 4110778
to top
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1590_E05
          Length = 148205

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 151    gcggcccttgcggtggcggaacag 174
              ||||||||||||||||| ||||||
Sbjct: 105701 gcggcccttgcggtggccgaacag 105724
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 208     gccggtcaccacgaacgcca 227
               ||||||||||||||||||||
Sbjct: 6540662 gccggtcaccacgaacgcca 6540681
to top
>dbj|AK100902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131J04, full
           insert sequence
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 151 gcggcccttgcggtggcggaacag 174
           ||||||||||||||||| ||||||
Sbjct: 491 gcggcccttgcggtggccgaacag 468
to top
>dbj|AK068909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003M02, full
           insert sequence
          Length = 1473

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 151 gcggcccttgcggtggcggaacag 174
           ||||||||||||||||| ||||||
Sbjct: 494 gcggcccttgcggtggccgaacag 471
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     ccatgatgcggcggcccttg 160
               ||||||||||||||||||||
Sbjct: 2286314 ccatgatgcggcggcccttg 2286333
to top
>emb|BX957317.12| Zebrafish DNA sequence from clone DKEY-150K17 in linkage group 19,
             complete sequence
          Length = 222684

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   tggacggacggacgaatgat 396
             ||||||||||||||||||||
Sbjct: 96833 tggacggacggacgaatgat 96852
to top
>gb|AY109489.1| Zea mays CL17814_1 mRNA sequence
          Length = 1497

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  ccctggccgggtgtcccatg 145
            ||||||||||||||||||||
Sbjct: 1257 ccctggccgggtgtcccatg 1238
to top
>gb|AY104458.1| Zea mays PCO099025 mRNA sequence
          Length = 1283

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 gttctcccgcgtcccgcact 287
           ||||||||||||||||||||
Sbjct: 64  gttctcccgcgtcccgcact 83
to top
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete
             sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   ctttgcttccagttatggtg 378
             ||||||||||||||||||||
Sbjct: 48746 ctttgcttccagttatggtg 48765


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,267,176
Number of Sequences: 3902068
Number of extensions: 3267176
Number of successful extensions: 47222
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46781
Number of HSP's gapped (non-prelim): 436
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top