ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein 490 e-135
2gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence 188 1e-44
3gb|AY109619.1| Zea mays CL9605_1 mRNA sequence 188 1e-44
4emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; c... 96 2e-16
5gb|AC009292.11| Homo sapiens chromosome 15, clone RP11-34F13, co... 44 0.50
6gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome... 44 0.50
7dbj|AK025177.1| Homo sapiens cDNA: FLJ21524 fis, clone COL05921 44 0.50
8gb|U88177.1| Caenorhabditis elegans cosmid F53E10, complete sequ... 42 2.0
9emb|BX901876.11| Zebrafish DNA sequence from clone CH211-140G2 i... 42 2.0
10emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in... 42 2.0
11gb|M89911.1|STMRPLL Streptomyces antibioticus ribosomal proteins... 42 2.0
12gb|AC161329.3| Dasypus novemcinctus clone VMRC5-459N3, complete ... 40 7.8
13gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Can... 40 7.8
14gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p... 40 7.8
15ref|XM_752985.1| Ustilago maydis 521 hypothetical protein (UM019... 40 7.8
16emb|AL669948.8| Mouse DNA sequence from clone RP23-248K2 on chro... 40 7.8
17gb|AC121775.3| Mus musculus BAC clone RP23-356B13 from chromosom... 40 7.8
18gb|AC124692.3| Mus musculus BAC clone RP24-159H19 from chromosom... 40 7.8
19gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete ... 40 7.8
20emb|AL357506.10| Human DNA sequence from clone RP11-327K21 on ch... 40 7.8
21gb|AC084053.6| Mus Musculus Strain C57BL6/J chromosome 3 BAC, RP... 40 7.8
22dbj|AK033660.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 7.8
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
24gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence 40 7.8
25dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
26dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
27dbj|BS000018.1| Pan troglodytes chromosome 22 clone:PTB-080A13, ... 40 7.8
28gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D1... 40 7.8
29emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009 40 7.8
30dbj|AP001153.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.8
31gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 7.8
32gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, comple... 40 7.8
33emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a1... 40 7.8
34emb|AJ245636.1|MMU245636 Mus musculus P2Y1 gene for P2Y1 receptor 40 7.8
35dbj|D50624.1|STMVBRA1 Streptomyces virginiae VbrA gene for NusG ... 40 7.8

>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein
          Length = 1892

 Score =  490 bits (247), Expect = e-135
 Identities = 396/446 (88%), Gaps = 6/446 (1%)
 Strand = Plus / Minus

                                                                        
Query: 129  gctcacacaggtgtctaccaagggtattccgaccataagattgtcacctcgaattcagca 188
            |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1749 gctcacatgggtgtctaccaagggtactccgaccataagattgtcacctcgaattcagca 1690

                                                                        
Query: 189  ccattgacaccaacaagacgttccacatgcaggccgtcggtggcagttttgaactcaagt 248
             |||||||||||||||||||| |   ||| ||||||||| ||||||||||||||||||| 
Sbjct: 1689 tcattgacaccaacaagacgtcctgtatggaggccgtcgatggcagttttgaactcaagc 1630

                                                                        
Query: 249  tggcctctaacaatttcatctccggatccaccacgatgaaggtcaagctcaatcgtcagc 308
            | ||||||||||||||||||||||||||||||| || ||| ||||||||||||||| |||
Sbjct: 1629 tcgcctctaacaatttcatctccggatccaccatgacgaatgtcaagctcaatcgtgagc 1570

                                                                        
Query: 309  ggtatgtgcaatggcacggcgagtgcatgcctcgccaacggaaccagctcccccggtcgc 368
            || |||||||  |||||||| || |||||||||||||| || ||||||||||| ||||||
Sbjct: 1569 ggcatgtgcagcggcacggcaagcgcatgcctcgccaaggggaccagctccccaggtcgc 1510

                                                                        
Query: 369  acgtgcactcccttgtcagcggcctccttgtagaagagcacgcaaccgacgtcgaacagc 428
            ||| ||||||      |||||||||| |||||||||||||| || ||||  |||||||||
Sbjct: 1509 acgcgcactc------cagcggcctcgttgtagaagagcacacagccgaaatcgaacagc 1456

                                                                        
Query: 429  ttgctgcgagcaacgatcctgccaacaagatcctcttcgtctcgggactgcaggcgcgca 488
            ||||||||||||||||||||||| || ||| || |||||||||||||||||||||  |||
Sbjct: 1455 ttgctgcgagcaacgatcctgccgacgagaaccacttcgtctcgggactgcaggccagca 1396

                                                                        
Query: 489  agcttcacatcgacccggccttggacgccattgctcaggacagcgtagatcacctccgct 548
            ||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||| 
Sbjct: 1395 agcttcacatcgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcg 1336

                                      
Query: 549  gggccgtagcatgtgtggacagtctc 574
            |||||| ||| |||| ||||||||||
Sbjct: 1335 gggccgcagcgtgtgaggacagtctc 1310



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%), Gaps = 4/83 (4%)
 Strand = Plus / Minus

                                                                        
Query: 11   ttacaaatgtattngaaaatacaaattagtatgtgt----aataaacacttatttttgaa 66
            |||||||| |||| ||||||||||||| ||||||||     | | |||||||||||| ||
Sbjct: 1856 ttacaaatatattagaaaatacaaattggtatgtgtcaaggaaagacacttatttttcaa 1797

                                   
Query: 67   ctgctagtgagttccatatagta 89
            ||  || ||||||||||||||||
Sbjct: 1796 ctcgtactgagttccatatagta 1774



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>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence
          Length = 1034

 Score =  188 bits (95), Expect = 1e-44
 Identities = 213/251 (84%), Gaps = 6/251 (2%)
 Strand = Plus / Minus

                                                                       
Query: 198 ccaacaagacgttccacatgcaggccgtcggtggcagttttgaactcaagttggcctcta 257
           |||||||| ||||||   ||| |||||| ||| ||||  |||||||||||    |||| |
Sbjct: 795 ccaacaagtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctcca 736

                                                                       
Query: 258 acaatttcatctccggatccaccacgatgaaggtcaagctcaatcgtcagcggtatgtgc 317
           ||||||||||| |||||   ||  ||||| ||||||||||||||||||||||| ||||||
Sbjct: 735 acaatttcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgc 679

                                                                       
Query: 318 aatggcacggcgagtgcatgcctcgccaacggaaccagctcccccggtcgcacgtgcact 377
           |  |||||||||||||| | |||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 678 agcggcacggcgagtgcttccctcgccaactgaaccagcccccccggtcgcacgttcact 619

                                                                       
Query: 378 cccttgtcagcggcctccttgtagaagagcacgcaaccgacgtcgaacagcttgctgcga 437
           || ||||||    |||| ||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 618 ccattgtca---ccctctttgtagaagagcacgcagccaacgtcaaacagcttgctgcga 562

                      
Query: 438 gcaacgatcct 448
           |||||||||||
Sbjct: 561 gcaacgatcct 551



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                       
Query: 499 cgacccggccttggacgccattgctcaggacagcgtagatcacctccgctgggccgtagc 558
           ||||||||||||||||||| ||||||||||| || |||||||| || || ||||| ||||
Sbjct: 485 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcagggccatagc 426

                           
Query: 559 atgtgtggacagtctc 574
             || |||||||||||
Sbjct: 425 ccgtttggacagtctc 410



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>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence
          Length = 1251

 Score =  188 bits (95), Expect = 1e-44
 Identities = 256/310 (82%), Gaps = 6/310 (1%)
 Strand = Plus / Plus

                                                                       
Query: 144 taccaagggtattccgaccataagattgtcacctcgaattcagcaccattgacaccaaca 203
           ||||||||||| | ||||||| | |||| ||| || |||||||| |||||  | ||||||
Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228

                                                                       
Query: 204 agacgttccacatgcaggccgtcggtggcagttttgaactcaagttggcctctaacaatt 263
           || ||||||   ||| |||||| ||| ||||  |||||||||||    |||| |||||||
Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288

                                                                       
Query: 264 tcatctccggatccaccacgatgaaggtcaagctcaatcgtcagcggtatgtgcaatggc 323
           ||||| |||||   ||  ||||| ||||||||||||||||||||||| |||||||  |||
Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345

                                                                       
Query: 324 acggcgagtgcatgcctcgccaacggaaccagctcccccggtcgcacgtgcactcccttg 383
           |||||||| || | |||||||||| ||| |||||     |||||||||| |||||| |||
Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405

                                                                       
Query: 384 tcagcggcctccttgtagaagagcacgcaaccgacgtcgaacagcttgctgcgagcaacg 443
           ||| |   ||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 406 tcacc---ctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacg 462

                     
Query: 444 atcctgccaa 453
           ||||| ||||
Sbjct: 463 atcctcccaa 472



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                       
Query: 499 cgacccggccttggacgccattgctcaggacagcgtagatcacctccgctgggccgtagc 558
           ||||||||||||||||||| ||||||||||| || |||||||| || || ||||| ||||
Sbjct: 533 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcggggccatagc 592

                           
Query: 559 atgtgtggacagtctc 574
             || |||||||||||
Sbjct: 593 ccgtttggacagtctc 608



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>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni
          Length = 328

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 488 aagcttcacatcgacccggccttggacgccattgctcaggacagcgtagatcacctccgc 547
           ||||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 7   aagcttcacgtcgacccggccttggatgccattgcttaggacggcgtagatcacctccgc 66

                           
Query: 548 tgggccgtagcatgtg 563
            ||||| |||| ||||
Sbjct: 67  ggggccatagcctgtg 82



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>gb|AC009292.11| Homo sapiens chromosome 15, clone RP11-34F13, complete sequence
          Length = 182855

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                           
Query: 33    aaattagtatgtgtaata-aacacttattt 61
             |||||||||||||||||| |||||||||||
Sbjct: 44471 aaattagtatgtgtaatacaacacttattt 44442



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>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence
          Length = 199695

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                           
Query: 33    aaattagtatgtgtaata-aacacttattt 61
             |||||||||||||||||| |||||||||||
Sbjct: 46116 aaattagtatgtgtaatacaacacttattt 46087



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>dbj|AK025177.1| Homo sapiens cDNA: FLJ21524 fis, clone COL05921
          Length = 3636

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                          
Query: 33   aaattagtatgtgtaata-aacacttattt 61
            |||||||||||||||||| |||||||||||
Sbjct: 2800 aaattagtatgtgtaatacaacacttattt 2771



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>gb|U88177.1| Caenorhabditis elegans cosmid F53E10, complete sequence
          Length = 26276

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    taaacacttatttttgaactg 69
             |||||||||||||||||||||
Sbjct: 10666 taaacacttatttttgaactg 10646



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>emb|BX901876.11| Zebrafish DNA sequence from clone CH211-140G2 in linkage group 18,
              complete sequence
          Length = 155813

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     atatagtagtatttgtatata 102
              |||||||||||||||||||||
Sbjct: 107617 atatagtagtatttgtatata 107597



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>emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in linkage group 18,
             complete sequence
          Length = 93818

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    atatagtagtatttgtatata 102
             |||||||||||||||||||||
Sbjct: 37930 atatagtagtatttgtatata 37910



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>gb|M89911.1|STMRPLL Streptomyces antibioticus ribosomal proteins L7 and L12 (rplL) gene,
            complete cds and ribosomal protein L10 (rplJ) gene,
            complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 379  ccttgtcagcggcctccttgt 399
            |||||||||||||||||||||
Sbjct: 1163 ccttgtcagcggcctccttgt 1143



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>gb|AC161329.3| Dasypus novemcinctus clone VMRC5-459N3, complete sequence
          Length = 144874

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   tcacacaggtgtctaccaag 150
             ||||||||||||||||||||
Sbjct: 25816 tcacacaggtgtctaccaag 25797



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>gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186580

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    ccaccacgatgaaggtcaag 295
              ||||||||||||||||||||
Sbjct: 151863 ccaccacgatgaaggtcaag 151844



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>gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p11-q21.1, complete
             sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tatagtagtatttgtatata 102
             ||||||||||||||||||||
Sbjct: 99482 tatagtagtatttgtatata 99463



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>ref|XM_752985.1| Ustilago maydis 521 hypothetical protein (UM01931.1) partial mRNA
          Length = 5037

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 500  gacccggccttggacgccat 519
            ||||||||||||||||||||
Sbjct: 2446 gacccggccttggacgccat 2465



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>emb|AL669948.8| Mouse DNA sequence from clone RP23-248K2 on chromosome 11, complete
            sequence
          Length = 223030

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tgtaataaacacttattttt 63
            ||||||||||||||||||||
Sbjct: 9197 tgtaataaacacttattttt 9178



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>gb|AC121775.3| Mus musculus BAC clone RP23-356B13 from chromosome 6, complete sequence
          Length = 188443

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   atagctgatagtactccact 126
             ||||||||||||||||||||
Sbjct: 65721 atagctgatagtactccact 65702



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>gb|AC124692.3| Mus musculus BAC clone RP24-159H19 from chromosome 3, complete sequence
          Length = 180230

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    agtatgtgtaataaacactt 57
             ||||||||||||||||||||
Sbjct: 81952 agtatgtgtaataaacactt 81971



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>gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete sequence
          Length = 113593

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    atatagtagtatttgtatat 101
             ||||||||||||||||||||
Sbjct: 59110 atatagtagtatttgtatat 59129



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>emb|AL357506.10| Human DNA sequence from clone RP11-327K21 on chromosome 6, complete
             sequence
          Length = 159294

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    aaattagtatgtgtaataaacact 56
             ||||||||||||| ||||||||||
Sbjct: 98316 aaattagtatgtggaataaacact 98293



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>gb|AC084053.6| Mus Musculus Strain C57BL6/J chromosome 3 BAC, RP23-158F1, complete
              sequence
          Length = 199415

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     agtatgtgtaataaacactt 57
              ||||||||||||||||||||
Sbjct: 199298 agtatgtgtaataaacactt 199279



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>dbj|AK033660.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
            library, clone:9130210N15 product:P2Y PURINOCEPTOR 1,
            full insert sequence
          Length = 2203

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   agtatgtgtaataaacactt 57
            ||||||||||||||||||||
Sbjct: 1966 agtatgtgtaataaacactt 1985



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 524      caggacagcgtagatcacct 543
                ||||||||||||||||||||
Sbjct: 28727141 caggacagcgtagatcacct 28727122



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 79       tccatatagtagtatttgtatata 102
                ||||||||||||||||| ||||||
Sbjct: 27326065 tccatatagtagtatttatatata 27326042



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>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence
          Length = 144092

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   cctccttgtagaagagcacg 410
             ||||||||||||||||||||
Sbjct: 78990 cctccttgtagaagagcacg 78971



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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   caggacagcgtagatcacct 543
             ||||||||||||||||||||
Sbjct: 43714 caggacagcgtagatcacct 43695



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>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1493_H11
          Length = 106693

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    tccatatagtagtatttgtatata 102
             ||||||||||||||||| ||||||
Sbjct: 40998 tccatatagtagtatttatatata 40975



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>dbj|BS000018.1| Pan troglodytes chromosome 22 clone:PTB-080A13, map 22, complete
            sequences
          Length = 173559

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tatagtagtatttgtatata 102
            ||||||||||||||||||||
Sbjct: 7125 tatagtagtatttgtatata 7106



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>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete
             sequence
          Length = 80442

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    caaattagtatgtgtaataa 51
             ||||||||||||||||||||
Sbjct: 35048 caaattagtatgtgtaataa 35029



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>emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tatagtagtatttgtatata 102
             ||||||||||||||||||||
Sbjct: 53782 tatagtagtatttgtatata 53763



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>dbj|AP001153.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-886D15, complete
             sequence
          Length = 172487

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    tatgtgtaataaacacttattttt 63
             |||||||||||||||| |||||||
Sbjct: 71278 tatgtgtaataaacacgtattttt 71255



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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    cagcaccattgacaccaacaagac 207
              ||||||| ||||||||||||||||
Sbjct: 114337 cagcaccgttgacaccaacaagac 114314



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>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    atagctgatagtactccact 126
              ||||||||||||||||||||
Sbjct: 147532 atagctgatagtactccact 147513



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>emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a17, COMPLETE SEQUENCE
          Length = 120704

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   cgcacgtgcactcccttgtc 385
             ||||||||||||||||||||
Sbjct: 18114 cgcacgtgcactcccttgtc 18133



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>emb|AJ245636.1|MMU245636 Mus musculus P2Y1 gene for P2Y1 receptor
          Length = 12630

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   agtatgtgtaataaacactt 57
            ||||||||||||||||||||
Sbjct: 4393 agtatgtgtaataaacactt 4412



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>dbj|D50624.1|STMVBRA1 Streptomyces virginiae VbrA gene for NusG like protein, SecE like
            protein and ribosomal protein, aspartate aminotransferase
            and adenosine deaminase, complete cds
          Length = 7409

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  ccttgtcagcggcctccttg 398
            ||||||||||||||||||||
Sbjct: 7135 ccttgtcagcggcctccttg 7116


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,138,718
Number of Sequences: 3902068
Number of extensions: 4138718
Number of successful extensions: 71069
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 70974
Number of HSP's gapped (non-prelim): 92
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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