| Clone Name | rbaal8f16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cagttgcagccccagcagcatc 368 |||||||||||||||||||||| Sbjct: 101579 cagttgcagccccagcagcatc 101600
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cagttgcagccccagcagcatc 368 |||||||||||||||||||||| Sbjct: 35703801 cagttgcagccccagcagcatc 35703822
>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15, complete sequence Length = 164720 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 aaattattttacaatttctttt 118 |||||||||||||||||||||| Sbjct: 62882 aaattattttacaatttctttt 62903
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cagttgcagccccagcagcatc 368 |||||||||||||||||||||| Sbjct: 35793874 cagttgcagccccagcagcatc 35793895
>gb|AC129181.4| Mus musculus chromosome UL clone RP23-325P17, complete sequence Length = 204520 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 90 agaaacaaaattattttacaatttcttttt 119 ||||||||||||||||||| |||| ||||| Sbjct: 112569 agaaacaaaattattttactattttttttt 112540
>emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chromosome X, complete sequence Length = 160779 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 96 aaaattattttacaatttctttttgcaaccttct 129 |||||||||||| || |||| ||||||||||||| Sbjct: 115258 aaaattattttaaaaattctgtttgcaaccttct 115225
>gb|AC164074.5| Mus musculus chromosome 5, clone RP23-69E3, complete sequence Length = 210871 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gcattttttaccagttgcagc 309 ||||||||||||||||||||| Sbjct: 163819 gcattttttaccagttgcagc 163799
>gb|AY582736.1| Cucumis melo clone BAC 31O16, complete sequence Length = 159477 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 aattattttacaatttctttt 118 ||||||||||||||||||||| Sbjct: 54134 aattattttacaatttctttt 54154
>gb|AC100737.18| Mus musculus chromosome 7, clone RP24-360I22, complete sequence Length = 148090 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ttttacaatttctttttgcaa 123 ||||||||||||||||||||| Sbjct: 63255 ttttacaatttctttttgcaa 63275
>ref|XM_841445.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.5060) partial mRNA Length = 1038 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 caaaattattttacaatttct 115 ||||||||||||||||||||| Sbjct: 987 caaaattattttacaatttct 1007
>gb|AC129211.3| Mus musculus BAC clone RP24-348E18 from chromosome 8, complete sequence Length = 167455 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 ttgcagcagcagacaggaaag 323 ||||||||||||||||||||| Sbjct: 152681 ttgcagcagcagacaggaaag 152661
>gb|AC129082.6| Mus musculus BAC clone RP24-324M11 from chromosome 8, complete sequence Length = 141671 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ttgcagcagcagacaggaaag 323 ||||||||||||||||||||| Sbjct: 140610 ttgcagcagcagacaggaaag 140630
>gb|AC113004.13| Mus musculus chromosome 5, clone RP23-250M13, complete sequence Length = 198820 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gcattttttaccagttgcagc 309 ||||||||||||||||||||| Sbjct: 163817 gcattttttaccagttgcagc 163797
>gb|AC079030.13| Homo sapiens 12 BAC RP3-342K15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99241 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 gggagaaacaaaattatttta 107 ||||||||||||||||||||| Sbjct: 60403 gggagaaacaaaattatttta 60423 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gggagaaacaaaattatttt 201 |||||||||||||||||||| Sbjct: 60403 gggagaaacaaaattatttt 60422
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tttaccagttgcagcagcaga 315 ||||||||||||||||||||| Sbjct: 3173209 tttaccagttgcagcagcaga 3173189
>gb|AC069143.3|T29M8 Sequence of BAC T29M8 from Arabidopsis thaliana chromosome 1, complete sequence Length = 58738 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 92 aaacaaaattattttacaatttctttttg 120 |||||| |||||| ||||||||||||||| Sbjct: 9225 aaacaatattattctacaatttctttttg 9197
>gb|AC106715.5| Homo sapiens 3 BAC RP11-695J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150222 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 tcaagcattttttaccagttg 305 ||||||||||||||||||||| Sbjct: 26380 tcaagcattttttaccagttg 26400
>emb|AJ234671.1|HVU234671 Hordeum vulgare genomic DNA fragment; clone MWG0952.uni Length = 602 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 tcattttcatcgagaagaaagcgcc 245 |||||||||| |||||||||||||| Sbjct: 414 tcattttcattgagaagaaagcgcc 438
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 cggcccggtgccgtagacatc 443 ||||||||||||||||||||| Sbjct: 1604219 cggcccggtgccgtagacatc 1604199
>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence Length = 232098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 ttttacaatttctttttgcaa 123 ||||||||||||||||||||| Sbjct: 3799 ttttacaatttctttttgcaa 3779
>gb|AC165077.3| Mus musculus BAC clone RP24-369J8 from chromosome 7, complete sequence Length = 179228 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ttttacaatttctttttgcaa 123 ||||||||||||||||||||| Sbjct: 72225 ttttacaatttctttttgcaa 72245
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ccaggaggaccatgcaacaa 403 |||||||||||||||||||| Sbjct: 225017 ccaggaggaccatgcaacaa 225036
>gb|AC124084.8| Mus musculus chromosome 15, clone RP24-410P21, complete sequence Length = 183447 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aaaattattttacaatttct 115 |||||||||||||||||||| Sbjct: 37663 aaaattattttacaatttct 37644
>gb|AY426976.1| Armigeres subalbatus aslectin AL-1 mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaattattttacaatttctt 116 |||||||||||||||||||| Sbjct: 910 aaattattttacaatttctt 891
>gb|AY426975.1| Armigeres subalbatus aslectin AL-1 gene, complete cds Length = 3811 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aaattattttacaatttctt 116 |||||||||||||||||||| Sbjct: 3449 aaattattttacaatttctt 3430
>gb|U88308.1| Caenorhabditis elegans cosmid C32E8, complete sequence Length = 43726 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ttattttacaatttcttttt 119 |||||||||||||||||||| Sbjct: 38869 ttattttacaatttcttttt 38850
>emb|CR855325.15| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5, complete sequence Length = 198456 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gagaaacaaaattattttacaatt 112 ||||||||||| |||||||||||| Sbjct: 79106 gagaaacaaaaatattttacaatt 79129
>emb|CT009478.9| M.truncatula DNA sequence from clone MTH2-106O21 on chromosome 3, complete sequence Length = 121373 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tattttacaatttctttttg 120 |||||||||||||||||||| Sbjct: 113272 tattttacaatttctttttg 113253
>ref|XM_567632.1| Cryptococcus neoformans var. neoformans JEC21 regulation of meiosis-related protein (CNK00690) partial mRNA Length = 1949 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ccaggaggaccatgcaacaa 403 |||||||||||||||||||| Sbjct: 838 ccaggaggaccatgcaacaa 819
>gb|AC126556.4| Mus musculus BAC clone RP23-64L3 from chromosome 15, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 caaaattattttacaatttctttt 118 ||||||||||||| |||||||||| Sbjct: 28376 caaaattattttaaaatttctttt 28399
>gb|AC091754.4| Papio anubis clone RP41-384C24, complete sequence Length = 192273 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 ggagaaacaaaattattttacaat 111 ||||||||||||||||||| |||| Sbjct: 177885 ggagaaacaaaattatttttcaat 177908 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ggagaaacaaaattattttt 202 |||||||||||||||||||| Sbjct: 177885 ggagaaacaaaattattttt 177904
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 ggagaaacaaaattattttacaat 111 ||||||||||||||||||| |||| Sbjct: 8061 ggagaaacaaaattatttttcaat 8084 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ggagaaacaaaattattttt 202 |||||||||||||||||||| Sbjct: 8061 ggagaaacaaaattattttt 8080
>gb|AC122924.2| Mus musculus BAC clone RP23-39M16 from 12, complete sequence Length = 228614 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 aattattttacaatttctttttgc 121 ||||||||| |||||||||||||| Sbjct: 74245 aattatttttcaatttctttttgc 74222
>gb|AC079791.5| Homo sapiens BAC clone RP11-500M10 from 7, complete sequence Length = 103836 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cagtgcacgggagaaacaaa 98 |||||||||||||||||||| Sbjct: 96264 cagtgcacgggagaaacaaa 96245 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cagtgcacgggagaaacaaa 193 |||||||||||||||||||| Sbjct: 96264 cagtgcacgggagaaacaaa 96245
>emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in linkage group 8, complete sequence Length = 203472 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 aaacaaaattattttacaat 111 |||||||||||||||||||| Sbjct: 21934 aaacaaaattattttacaat 21953
>emb|BX255892.3| Human DNA sequence from clone CTD-2176C4 on chromosome X, complete sequence Length = 11737 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaattatgtttacaatttct 22 |||||||||||||||||||| Sbjct: 7284 aaattatgtttacaatttct 7303
>emb|AL662886.6| Human DNA sequence from clone RP13-339K12 on chromosome X Contains a pseudogene similar to part of p30 (nuclear protein p30) and a CpG island, complete sequence Length = 63451 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaattatgtttacaatttct 22 |||||||||||||||||||| Sbjct: 3891 aaattatgtttacaatttct 3910
>emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 153558 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 aaattattttacaatttctt 116 |||||||||||||||||||| Sbjct: 58117 aaattattttacaatttctt 58136
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 gatgccgaaccgctttgtcgataa 537 ||||| |||||||||||||||||| Sbjct: 819154 gatgctgaaccgctttgtcgataa 819177
>gb|AC008679.5| Homo sapiens chromosome 5 clone CTB-53D8, complete sequence Length = 232613 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttatgtttacaatttctttt 25 |||||||||||||||||||| Sbjct: 176687 ttatgtttacaatttctttt 176706
>emb|CR450716.5| Zebrafish DNA sequence from clone DKEYP-84G1 in linkage group 18, complete sequence Length = 193900 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gaatcaagcattttttacca 301 |||||||||||||||||||| Sbjct: 67191 gaatcaagcattttttacca 67172
>gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, complete sequence Length = 188261 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 attatgtttacaatttcttt 24 |||||||||||||||||||| Sbjct: 155896 attatgtttacaatttcttt 155915
>emb|BX769174.7| Zebrafish DNA sequence from clone DKEY-246O14, complete sequence Length = 187545 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gaatcaagcattttttacca 301 |||||||||||||||||||| Sbjct: 143818 gaatcaagcattttttacca 143837
>gb|AC006959.1| Homo sapiens chromosome 5, RP1-117N3 (LBNL h74), complete sequence Length = 100987 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttatgtttacaatttctttt 25 |||||||||||||||||||| Sbjct: 20353 ttatgtttacaatttctttt 20372
>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence Length = 88068 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggagaaacaaaattatttta 107 |||||||||||||||||||| Sbjct: 43433 ggagaaacaaaattatttta 43452
>dbj|D14049.1|ATHGR Arabidopsis thaliana mRNA for glutathione reductase, complete cds Length = 1993 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tctttttgcaaccttctcta 132 |||||||||||||||||||| Sbjct: 1733 tctttttgcaaccttctcta 1714
>gb|AC022874.8| Homo sapiens chromosome 8, clone RP11-396J6, complete sequence Length = 177513 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 caaaattattttacaatttctttt 118 ||||||||||||||| |||||||| Sbjct: 172389 caaaattattttacattttctttt 172412
>gb|AC022861.4| Homo sapiens chromosome 8, clone RP11-343B22, complete sequence Length = 148064 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 caaaattattttacaatttctttt 118 ||||||||||||||| |||||||| Sbjct: 11839 caaaattattttacattttctttt 11862
>gb|AC021829.8| Homo sapiens chromosome 11, clone RP11-436H16, complete sequence Length = 163497 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gaaacaaaattattttacaa 110 |||||||||||||||||||| Sbjct: 68978 gaaacaaaattattttacaa 68959
>gb|AC009626.9| Homo sapiens, clone RP11-319N16, complete sequence Length = 182133 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 caaaattattttacaatttctttt 118 ||||||||||||||| |||||||| Sbjct: 80619 caaaattattttacattttctttt 80596
>emb|BX890609.7| Zebrafish DNA sequence from clone DKEY-56E5, complete sequence Length = 228713 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 agaaacaaaattattttacaattt 113 |||||||||| ||||||||||||| Sbjct: 226451 agaaacaaaagtattttacaattt 226428
>emb|BX649281.7| Zebrafish DNA sequence from clone CH211-210H14 in linkage group 17, complete sequence Length = 157279 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aattattttacaatttcttt 117 |||||||||||||||||||| Sbjct: 98839 aattattttacaatttcttt 98858
>gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O8, complete sequence Length = 114802 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tattttacaatttctttttg 120 |||||||||||||||||||| Sbjct: 56473 tattttacaatttctttttg 56492
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 attttacaatttctttttgc 121 |||||||||||||||||||| Sbjct: 2493200 attttacaatttctttttgc 2493219
>gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, complete sequence Length = 207974 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 aaaattattttacaatttct 115 |||||||||||||||||||| Sbjct: 109999 aaaattattttacaatttct 110018
>gb|AC022079.16|AC022079 Homo sapiens 12 BAC RP11-425D17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181193 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaaattatgtttacaatttc 21 |||||||||||||||||||| Sbjct: 67277 aaaattatgtttacaatttc 67258
>gb|AC008910.5|AC008910 Homo sapiens chromosome 5 clone CTD-2267A1, complete sequence Length = 78303 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tattttacaatttctttttg 120 |||||||||||||||||||| Sbjct: 12396 tattttacaatttctttttg 12415
>ref|XM_224970.3| PREDICTED: Rattus norvegicus cytoskeleton associated protein 2 (predicted) (Ckap2_predicted), mRNA Length = 2547 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cagcagacaggaaagctcag 328 |||||||||||||||||||| Sbjct: 1088 cagcagacaggaaagctcag 1107
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 tgcgcgcacgcggcgcttgc 577 |||||||||||||||||||| Sbjct: 137442 tgcgcgcacgcggcgcttgc 137423
>ref|XM_574538.1| PREDICTED: Rattus norvegicus similar to cytoskeleton associated protein 2 (LOC499245), mRNA Length = 2345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cagcagacaggaaagctcag 328 |||||||||||||||||||| Sbjct: 1391 cagcagacaggaaagctcag 1410
>emb|BX813318.3| Mouse DNA sequence from clone RP23-123N16 on chromosome 2, complete sequence Length = 66128 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 agttgcagccccagcagcatctgc 371 |||||||||||||||| ||||||| Sbjct: 46447 agttgcagccccagcaccatctgc 46424
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 gatgccgaaccgctttgtcgataa 537 ||||| |||||||||||||||||| Sbjct: 882511 gatgctgaaccgctttgtcgataa 882534
>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19, complete sequence Length = 143486 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 agaaacaaaattattttaca 109 |||||||||||||||||||| Sbjct: 37797 agaaacaaaattattttaca 37816
>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 aaacaaaattatttttgccc 206 |||||||||||||||||||| Sbjct: 52825 aaacaaaattatttttgccc 52806
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cggccagttgcagccccagc 362 |||||||||||||||||||| Sbjct: 2762825 cggccagttgcagccccagc 2762844
>gb|AC147029.3| Mus musculus BAC clone RP23-239P5 from 12, complete sequence Length = 194385 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 aattattttacaatttctttttgc 121 ||||||||| |||||||||||||| Sbjct: 84426 aattatttttcaatttctttttgc 84449
>emb|CR450734.11| Zebrafish DNA sequence from clone DKEY-53N24 in linkage group 5, complete sequence Length = 73893 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 caaaattatgtttacaatttcttt 24 ||||||||||||||||||| |||| Sbjct: 3117 caaaattatgtttacaattgcttt 3140
>gb|L27834.1|BOVPAG1A2 Bos taurus pregnancy-associated glycoprotein-1 (PAG1), exons 7 and 8 Length = 754 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagccccagcagcatctgca 372 |||||||||||||||||||| Sbjct: 746 cagccccagcagcatctgca 727
>emb|AL670758.9| Mouse DNA sequence from clone RP23-235O16 on chromosome X, complete sequence Length = 144854 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 aaaattattttacaatttcttttt 119 ||||| |||||||||||||||||| Sbjct: 61527 aaaataattttacaatttcttttt 61550 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,372,178 Number of Sequences: 3902068 Number of extensions: 6372178 Number of successful extensions: 138253 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137826 Number of HSP's gapped (non-prelim): 427 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)