>TRMD_PSEAE (Q9HXQ1) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 252

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -2

Query: 277 DEHFLEFHCHMRTE-ASRILLHRSLPXVASQSRRCRVVPGVRIHACSAEVCTFSDG 113
           DE F+E H          +L    LP +       R++PG   HA SAE  +F+DG
Sbjct: 124 DERFIEEHVDEEWSIGDYVLSGGELPAMVLVDAVTRLLPGALGHADSAEEDSFTDG 179

>YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I|
          Length = 783

 Score = 25.0 bits (53), Expect(2) = 3.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 164 RYNTTTPGLRRHGRQ 208
           RYN+ TPG  +H RQ
Sbjct: 736 RYNSLTPGYHKHKRQ 750



 Score = 22.3 bits (46), Expect(2) = 3.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 45  RATTKIA*PSRDFASEISRPGQVPSENVQTSAEQ 146
           R   K++  +  +A +  RP Q PSE ++T   Q
Sbjct: 685 RGEQKVSHSNCLYADQTLRPSQPPSEALKTVVNQ 718

>UBP1_HUMAN (O94782) Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 1) (Ubiquitin-specific
           processing protease 1) (Deubiquitinating enzyme 1)
           (hUBP)
          Length = 785

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 277 DEHFLEFHCHMRTEASRILLHRSLPXVASQSRRCRVVPGV 158
           D++F E +CH  TEA R LL   +P V +   +C    G+
Sbjct: 502 DKYFCE-NCHHYTEAERSLLFDKMPEVITIHLKCFAASGL 540

>TRMD_SHEON (Q8CX44) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 248

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = -2

Query: 226 ILLHRSLPXVASQSRRCRVVPGVRIHACSAEVCTFSDGT*PGLLISEAKSLDG*AILVVA 47
           +L    LP +       R+VPGV     SAE  +FSDG       +  +SLDG  +  V 
Sbjct: 137 VLSGGELPAMTMIDAVSRLVPGVLGKQASAEQDSFSDGLLDCPHYTRPESLDGLDVPAVL 196

Query: 46  L 44
           L
Sbjct: 197 L 197

>METK_BRAJA (Q89HP5) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 398

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 105 GQVPSENVQTSAEQACILTPGTTRQRLD 188
           G+VP E ++ +A QA  LTP   R  LD
Sbjct: 331 GKVPEEQLEKAAAQAMDLTPRGIRSHLD 358

>TRMD_PSESM (Q886V0) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 250

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 277 DEHFLEFHCHMRTE-ASRILLHRSLPXVASQSRRCRVVPGVRIHACSAEVCTFSDG 113
           DE F+E H          +L    LP +       R++PG   H  SAE  +F+DG
Sbjct: 122 DERFIEAHVDEEWSIGDYVLSGGELPAMVLIDAVTRLLPGALGHVDSAEEDSFTDG 177

>TRMD_PSEPK (Q88MV4) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 250

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 277 DEHFLEFHCHMRTE-ASRILLHRSLPXVASQSRRCRVVPGVRIHACSAEVCTFSDG 113
           DE F+E H          +L    LP +       R++PG   H  SAE  +F+DG
Sbjct: 122 DERFIEAHVDEEWSIGDYVLSGGELPAMVLIDAVTRLLPGALGHVDSAEEDSFTDG 177

>CAT1_PENJA (P81138) Catalase (EC 1.11.1.6)|
          Length = 696

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 163 QVQHDNAWTATPRXAMIGAKESLRPPSSYDSEIRENVHQSVERLGV 300
           Q Q  N W        +G +E+ R P   +  + EN+ +S+E L V
Sbjct: 224 QFQCSNHWQPLQGFIDLGVEEAWRFPEEGEGYVAENLFESIELLTV 269

>P2OX_PHACH (Q6QWR1) Pyranose 2-oxidase precursor (EC 1.1.3.10) (P2Ox) (P2O)|
           (Pyranose oxidase) (PROD) (POD) (POx) (Pyranose:oxygen
           2-oxidoreductase) (Glucose 2-oxidase)
           (FAD-oxidoreductase)
          Length = 621

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +3

Query: 105 GQVPSENVQTSAEQACILTPGTTRQRLDCDATXGNDRCK 221
           G +P    Q       +   GTTR  LD   T GN  CK
Sbjct: 536 GYLPGSEPQFMTPGLALHLAGTTRCGLDTQKTVGNTHCK 574


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,258,356
Number of Sequences: 219361
Number of extensions: 753521
Number of successful extensions: 1803
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)