>ATG1_EMENI (Q5BCU8) Serine/threonine-protein kinase atg1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 935

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -1

Query: 241 KQLPPSSVPPSPRTIQHSHC--NQSVSGKH 158
           KQ+PP++ PP P  + H+     Q + G+H
Sbjct: 419 KQIPPAAAPPRPEAVSHATAPGRQELIGRH 448

>SYM_AZOSE (Q5P239) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 718

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 102 AFSYILYGRRWSPCPARHTCTPHYHIV 22
           A   +++ + W P PA HT  P+ H++
Sbjct: 525 AIDPLVWPQTWQPLPAAHTINPYAHLM 551

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (Ca(v)3.3)
          Length = 2223

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 207  GDGGTEEGGSCFRCTSPS 260
            G GG  EGG C RC SP+
Sbjct: 1780 GGGGDTEGGLCRRCYSPA 1797

>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome|
           biogenesis factor 10) (RING finger protein 69)
          Length = 326

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 316 RTGLACLLRRHLIWFQI 366
           R GLACL R H+ WF I
Sbjct: 168 RQGLACLQRLHVAWFYI 184

>ZO3_HUMAN (O95049) Tight junction protein ZO-3 (Zonula occludens 3 protein)|
           (Zona occludens 3 protein) (Tight junction protein 3)
          Length = 933

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 244 LKQLPPSSVPPSPRTIQHS 188
           L Q PPS +PP PR  Q S
Sbjct: 315 LSQAPPSHIPPPPRHAQRS 333

>GSLG1_CHICK (Q02391) Golgi apparatus protein 1 precursor (Cysteine-rich|
           fibroblast growth factor receptor)
          Length = 1142

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 214 AAQRREGAASGALHRRGARRQLPVVDGGWRL 306
           A Q  +GAA GA   RGAR       GGW+L
Sbjct: 45  AGQPAQGAAPGAAGPRGARGGGGGSGGGWKL 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,247,502
Number of Sequences: 219361
Number of extensions: 987719
Number of successful extensions: 2970
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2969
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)