>MFGM_PIG (P79385) Lactadherin (Milk fat globule-EGF factor 8) (MFG-E8)|
           (MFGM) (Sperm surface protein SP47) (PP47)
          Length = 409

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 603 KVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVG 484
           +VTG   + +   GH   +  Y  AY D+ V WTE RD G
Sbjct: 320 RVTGIITQGARDFGHIQYVAAYKVAYSDDGVSWTEYRDQG 359

>COL7_CAEEL (P18832) Cuticle collagen 7 precursor|
          Length = 316

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -2

Query: 568 PGPPREAGAV----QPGVPGRVGAVDGEPRRGQGLP 473
           PGPP  AG+     Q G PG  G+     +RG+GLP
Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLP 206

>MFGM_BOVIN (Q95114) Lactadherin precursor (Milk fat globule-EGF factor 8)|
           (MFG-E8) (MGP57/53) (PAS-6/PAS-7 glycoprotein) (MFGM)
           (Sperm surface protein SP47) (BP47) (Components 15/16)
          Length = 427

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 603 KVTGECIKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVG 484
           +VTG   + +   GH   +  Y  AY D+ V WTE +D G
Sbjct: 338 RVTGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPG 377

>WCAI_ECOLI (P32057) Putative colanic acid biosynthesis glycosyl transferase|
           wcaI
          Length = 407

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
 Frame = -3

Query: 624 PAFAIVNKVTGECIKHSTGQGHPVKLV---PYNPAYQ--DESVLWTESRDVGKG--FRC 469
           P    + K TGE ++    QGH V+++   PY P +Q  +    W   R+ G    +RC
Sbjct: 12  PELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKREEGAATVWRC 70

>GLPK1_SULAC (Q4J9R1) Glycerol kinase 1 (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase 1) (Glycerokinase 1) (GK 1)
          Length = 498

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = -3

Query: 585 IKHSTGQGHPVKLVPYNPAYQDESVLWTESRDVGKGFRCVRMV------NNIYLNFDA 430
           I   T +GH  + V  + AYQ   V+    +DVGK F  V  V      NN+ + F A
Sbjct: 360 ISRGTSRGHIARAVLESIAYQVRDVIEVIKKDVGKEFVNVLKVDGGVSKNNLLMQFQA 417

>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor|
          Length = 1691

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 571  RPGPPREAGAVQPGVPGRVGAVDGEP 494
            RPGPP   GA  PG+PG +  V G+P
Sbjct: 994  RPGPPGLPGA--PGLPGIIKGVSGKP 1017

>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 580 ALHRPGPPREAG-AVQPGVPGRVGAVDGEPRRGQGLPLRAHGE 455
           A  R GPP  +G A  PG PG VG   G+  RG+  P    GE
Sbjct: 868 AAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGE 910

>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 580 ALHRPGPPREAG-AVQPGVPGRVGAVDGEPRRGQGLPLRAHGE 455
           A  R GPP  +G A  PG PG VG   G+  RG+  P    GE
Sbjct: 868 AAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGE 910

>MK03_HUMAN (P27361) Mitogen-activated protein kinase 3 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 1) (ERK-1)
           (Insulin-stimulated MAP2 kinase) (MAP kinase 1) (MAPK 1)
           (p44-ERK1) (ERT2) (p44-MAPK) (Microtubule-associated
           protein 2 kinase)
          Length = 379

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 565 GPPREAGAVQPGVPGRVGAVDGEP 494
           G PR    V PGVPG V  V G+P
Sbjct: 12  GEPRRTEGVGPGVPGEVEMVKGQP 35

>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)|
          Length = 299

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 568 PGPPREAGAV-QPGVPGRVGAVDGEPRRGQGLPLRAHG 458
           PGPP EAG    PG PG+ GA DG P  GQ  P   +G
Sbjct: 218 PGPPGEAGPQGPPGSPGQPGA-DGSP--GQPGPKGPNG 252


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,466,031
Number of Sequences: 219361
Number of extensions: 1449722
Number of successful extensions: 6043
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6025
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)