>ref|NM_190977.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 480

 Score =  200 bits (101), Expect = 3e-48
 Identities = 242/289 (83%)
 Strand = Plus / Minus

                                                                       
Query: 123 tcccagtgggtgagtttgactttgtgcagaggatcttccttcctttgtcacgtctacgct 182
           |||||||||| ||||| | |||||||||||| | | | ||||||||| | ||||| ||||
Sbjct: 463 tcccagtgggggagttcgtctttgtgcagagaacccttcttcctttggcgcgtctgcgct 404

                                                                       
Query: 183 tcagaacccttcttccagcagtagtccgcatccgccttcggaaaccatgcacacgggcaa 242
           |||| ||| ||||||| |||||||||| |||||| || || ||||||||   ||||||||
Sbjct: 403 tcaggacctttcttccggcagtagtcctcatccgtctgcgaaaaccatgtgtacgggcaa 344

                                                                       
Query: 243 gtgacttcctagatcttgacctcttagtcaggcagagggcagcctttccggccctaatct 302
           | ||||||||||||||    ||||| |||| ||| || ||||||||||| ||||||||||
Sbjct: 343 gcgacttcctagatctatttctcttggtcatgcacagagcagcctttccagccctaatct 284

                                                                       
Query: 303 gtagaccacgaggtcttcgtgttgttaatctgttgtaactgaactcaattcccaaagatg 362
           | |||   || | ||||| |||||| | ||||||||| ||||| ||||||||||||||||
Sbjct: 283 gcagaatccgggatcttcctgttgtaactctgttgtagctgaattcaattcccaaagatg 224

                                                            
Query: 363 aaccgccgaacgaggaggcagaggtgaaggcgagcgacgccgagaccgc 411
           ||||  | || |||||||||||||||||||  |||||||||||||||||
Sbjct: 223 aaccagcaaatgaggaggcagaggtgaaggtcagcgacgccgagaccgc 175

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 1e-35
 Identities = 203/244 (83%)
 Strand = Plus / Plus

                                                                            
Query: 123      tcccagtgggtgagtttgactttgtgcagaggatcttccttcctttgtcacgtctacgct 182
                |||||||||| ||||| | |||||||||||| | | | ||||||||| | ||||| ||||
Sbjct: 34127268 tcccagtgggggagttcgtctttgtgcagagaacccttcttcctttggcgcgtctgcgct 34127327

                                                                            
Query: 183      tcagaacccttcttccagcagtagtccgcatccgccttcggaaaccatgcacacgggcaa 242
                |||| ||| ||||||| |||||||||| |||||| || || ||||||||   ||||||||
Sbjct: 34127328 tcaggacctttcttccggcagtagtcctcatccgtctgcgaaaaccatgtgtacgggcaa 34127387

                                                                            
Query: 243      gtgacttcctagatcttgacctcttagtcaggcagagggcagcctttccggccctaatct 302
                | ||||||||||||||    ||||| |||| ||| || ||||||||||| ||||||||||
Sbjct: 34127388 gcgacttcctagatctatttctcttggtcatgcacagagcagcctttccagccctaatct 34127447

                                                                            
Query: 303      gtagaccacgaggtcttcgtgttgttaatctgttgtaactgaactcaattcccaaagatg 362
                | |||   || | ||||| |||||| | ||||||||| ||||| ||||||||||||||||
Sbjct: 34127448 gcagaatccgggatcttcctgttgtaactctgttgtagctgaattcaattcccaaagatg 34127507

                    
Query: 363      aacc 366
                ||||
Sbjct: 34127508 aacc 34127511



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 374      gaggaggcagaggtgaaggcgagcgacgccgagaccgc 411
                |||||||||||||||||||  |||||||||||||||||
Sbjct: 34128633 gaggaggcagaggtgaaggtcagcgacgccgagaccgc 34128670

>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score =  159 bits (80), Expect = 1e-35
 Identities = 203/244 (83%)
 Strand = Plus / Plus

                                                                          
Query: 123    tcccagtgggtgagtttgactttgtgcagaggatcttccttcctttgtcacgtctacgct 182
              |||||||||| ||||| | |||||||||||| | | | ||||||||| | ||||| ||||
Sbjct: 123746 tcccagtgggggagttcgtctttgtgcagagaacccttcttcctttggcgcgtctgcgct 123805

                                                                          
Query: 183    tcagaacccttcttccagcagtagtccgcatccgccttcggaaaccatgcacacgggcaa 242
              |||| ||| ||||||| |||||||||| |||||| || || ||||||||   ||||||||
Sbjct: 123806 tcaggacctttcttccggcagtagtcctcatccgtctgcgaaaaccatgtgtacgggcaa 123865

                                                                          
Query: 243    gtgacttcctagatcttgacctcttagtcaggcagagggcagcctttccggccctaatct 302
              | ||||||||||||||    ||||| |||| ||| || ||||||||||| ||||||||||
Sbjct: 123866 gcgacttcctagatctatttctcttggtcatgcacagagcagcctttccagccctaatct 123925

                                                                          
Query: 303    gtagaccacgaggtcttcgtgttgttaatctgttgtaactgaactcaattcccaaagatg 362
              | |||   || | ||||| |||||| | ||||||||| ||||| ||||||||||||||||
Sbjct: 123926 gcagaatccgggatcttcctgttgtaactctgttgtagctgaattcaattcccaaagatg 123985

                  
Query: 363    aacc 366
              ||||
Sbjct: 123986 aacc 123989



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 374    gaggaggcagaggtgaaggcgagcgacgccgagaccgc 411
              |||||||||||||||||||  |||||||||||||||||
Sbjct: 125111 gaggaggcagaggtgaaggtcagcgacgccgagaccgc 125148

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 384    aggtgaaggcgagcgacgccgaga 407
              ||||||||||||||||||||||||
Sbjct: 544642 aggtgaaggcgagcgacgccgaga 544619

>gb|AC010092.4| Homo sapiens BAC clone RP11-306M1 from 2, complete sequence
          Length = 140226

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 479   cggggaggcggaggcccccatggg 502
             ||||||||||||||||||||||||
Sbjct: 99971 cggggaggcggaggcccccatggg 99948

>gb|U70855.2| Caenorhabditis elegans cosmid K08F11, complete sequence
          Length = 26520

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   gaggaggcagaggtgaaggcga 395
             ||||||||||||||||||||||
Sbjct: 25102 gaggaggcagaggtgaaggcga 25081

>gb|AC112270.3| Mus musculus BAC clone RP24-117A22 from 5, complete sequence
          Length = 180594

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 184   cagaacccttcttccagcagta 205
             ||||||||||||||||||||||
Sbjct: 77341 cagaacccttcttccagcagta 77320

>ref|NM_058707.3| Caenorhabditis elegans LiPid Depleted family member (lpd-6) (lpd-6)
            mRNA, complete cds
          Length = 1824

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 374  gaggaggcagaggtgaaggcga 395
            ||||||||||||||||||||||
Sbjct: 1147 gaggaggcagaggtgaaggcga 1168

>gb|AC024864.1|AC024864 Caenorhabditis elegans clone Y74C9A, complete sequence
          Length = 47629

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   gaggaggcagaggtgaaggcga 395
             ||||||||||||||||||||||
Sbjct: 23274 gaggaggcagaggtgaaggcga 23253

>gb|AF043700.1| Caenorhabditis elegans cosmid K09H9, complete sequence
          Length = 37881

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   gaggaggcagaggtgaaggcga 395
             ||||||||||||||||||||||
Sbjct: 23249 gaggaggcagaggtgaaggcga 23228

>gb|AC024206.1| Caenorhabditis elegans cosmid Y74C9A, complete sequence
          Length = 47629

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   gaggaggcagaggtgaaggcga 395
             ||||||||||||||||||||||
Sbjct: 23274 gaggaggcagaggtgaaggcga 23253

>gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complete sequence
          Length = 218524

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 184    cagaacccttcttccagcagta 205
              ||||||||||||||||||||||
Sbjct: 186895 cagaacccttcttccagcagta 186874

>gb|AC098829.3| Homo sapiens BAC clone RP11-665G4 from 4, complete sequence
          Length = 176778

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 248   ttcctagatcttgacctctta 268
             |||||||||||||||||||||
Sbjct: 61118 ttcctagatcttgacctctta 61138

>emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K15, complete sequence
          Length = 184517

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     gtaaaacttacagctggaata 86
              |||||||||||||||||||||
Sbjct: 145116 gtaaaacttacagctggaata 145136

>emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L19, complete sequence
          Length = 180915

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gtaaaacttacagctggaata 86
              |||||||||||||||||||||
Sbjct: 135130 gtaaaacttacagctggaata 135110

>gb|AC087899.40| Mus musculus strain C57BL/6J chromosome 19 clone rp23-170m6, complete
             sequence
          Length = 194291

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   gtcaggcagagggcagccttt 289
             |||||||||||||||||||||
Sbjct: 80421 gtcaggcagagggcagccttt 80401

>gb|AC169037.4| Mus musculus BAC clone RP23-85E20 from chromosome 16, complete sequence
          Length = 184591

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 269    gtcaggcagagggcagccttt 289
              |||||||||||||||||||||
Sbjct: 118921 gtcaggcagagggcagccttt 118941

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 383     gaggtgaaggcgagcgacgccgagaccg 410
               |||||| ||||| |||||||||||||||
Sbjct: 1585085 gaggtgcaggcgcgcgacgccgagaccg 1585058

>gb|AC124353.5| Mus musculus BAC clone RP24-481I14 from chromosome 12, complete
             sequence
          Length = 152881

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gaggaggcagaggtgaaggc 393
             ||||||||||||||||||||
Sbjct: 72584 gaggaggcagaggtgaaggc 72565

>emb|AL929439.6| Mouse DNA sequence from clone RP23-207J10 on chromosome 11, complete
            sequence
          Length = 7130

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  taactgaactcaattcccaa 357
            ||||||||||||||||||||
Sbjct: 4819 taactgaactcaattcccaa 4838

>emb|CR860965.1| Pongo pygmaeus mRNA; cDNA DKFZp469E1114 (from clone DKFZp469E1114)
          Length = 1500

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  caggcagagggcagcctttc 290
            ||||||||||||||||||||
Sbjct: 1051 caggcagagggcagcctttc 1070

>gb|AE012265.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 173
            of 460 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  agaggtgaaggcgagcgacg 401
            ||||||||||||||||||||
Sbjct: 8439 agaggtgaaggcgagcgacg 8458

>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence
          Length = 177985

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      gggaaaagatgtgcagcaat 23
              ||||||||||||||||||||
Sbjct: 129980 gggaaaagatgtgcagcaat 129961

>gb|AF277846.2|AF277846 Pinus taeda clone 51k4f microsatellite PtTX3002 sequence
          Length = 386

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gaggaggcagaggtgaaggc 393
           ||||||||||||||||||||
Sbjct: 309 gaggaggcagaggtgaaggc 328

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 382     agaggtgaaggcgagcgacg 401
               ||||||||||||||||||||
Sbjct: 3123852 agaggtgaaggcgagcgacg 3123833

>ref|NM_075536.1| Caenorhabditis elegans B0250.8 (B0250.8) mRNA, complete cds
          Length = 885

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gaggaggcagaggtgaaggc 393
           ||||||||||||||||||||
Sbjct: 214 gaggaggcagaggtgaaggc 233

>ref|XM_395593.2| PREDICTED: Apis mellifera similar to CG3707-PA, isoform A
           (LOC412129), mRNA
          Length = 3492

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  gtgcaaaaagagtaaaactt 74
           ||||||||||||||||||||
Sbjct: 224 gtgcaaaaagagtaaaactt 243

>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     acattgcgctgtaatcaata 117
              ||||||||||||||||||||
Sbjct: 944054 acattgcgctgtaatcaata 944035

>gb|AC068491.4| Homo sapiens BAC clone RP11-803D5 from 2, complete sequence
          Length = 176551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    aggcagagggcagcctttcc 291
              ||||||||||||||||||||
Sbjct: 172478 aggcagagggcagcctttcc 172459

>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174487

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   caggcagagggcagcctttc 290
             ||||||||||||||||||||
Sbjct: 46733 caggcagagggcagcctttc 46714

>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence
          Length = 192494

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aggcagagggcagcctttcc 291
             ||||||||||||||||||||
Sbjct: 32829 aggcagagggcagcctttcc 32810

>gb|AC145419.3| Dasypus novemcinctus clone VMRC5-468K1, complete sequence
          Length = 151116

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gaggaggcagaggtgaaggc 393
             ||||||||||||||||||||
Sbjct: 74856 gaggaggcagaggtgaaggc 74837

>emb|CR354403.16| Zebrafish DNA sequence from clone CH211-196E8 in linkage group 9,
             complete sequence
          Length = 167419

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aaacttacagctggaataca 88
             ||||||||||||||||||||
Sbjct: 45101 aaacttacagctggaataca 45120

>emb|Z81453.1|CEB0250 Caenorhabditis elegans Cosmid B0250, complete sequence
          Length = 39216

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gaggaggcagaggtgaaggc 393
             ||||||||||||||||||||
Sbjct: 15400 gaggaggcagaggtgaaggc 15381

>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence
          Length = 102061

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 133  tgagtttgactttgtgcaga 152
            ||||||||||||||||||||
Sbjct: 7777 tgagtttgactttgtgcaga 7758


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,246,704
Number of Sequences: 3902068
Number of extensions: 5246704
Number of successful extensions: 73779
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73621
Number of HSP's gapped (non-prelim): 149
length of query: 548
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 525
effective length of database: 17,143,297,704
effective search space: 9000231294600
effective search space used: 9000231294600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)