| Clone Name | rbaal36c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, complete sequence Length = 188944 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 280 ctgcctttcctcttcaggtcata 302 ||||||||||||||||||||||| Sbjct: 56477 ctgcctttcctcttcaggtcata 56499
>gb|BC065063.1| Mus musculus delta-like 1 (Drosophila), mRNA (cDNA clone MGC:64654 IMAGE:6416191), complete cds Length = 3209 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 3022 taaattttggtaaatatgtac 3042
>ref|NM_007865.2| Mus musculus delta-like 1 (Drosophila) (Dll1), mRNA Length = 3209 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 3022 taaattttggtaaatatgtac 3042
>emb|X80903.1|MMDELTA1 M.musculus mRNA for Delta-like 1 protein Length = 2857 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 2687 taaattttggtaaatatgtac 2707
>ref|XM_448312.1| Candida glabrata CBS138, CAGL0K01991g partial mRNA Length = 2019 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 tctccttcatcttctcgacaa 211 ||||||||||||||||||||| Sbjct: 1747 tctccttcatcttctcgacaa 1727
>gb|AF196571.1| Homo sapiens Delta-like-1 protein (DLL1) mRNA, complete cds Length = 3122 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 2987 taaattttggtaaatatgtac 3007
>gb|AC125078.2| Mus musculus BAC clone RP23-478C7 from chromosome 6, complete sequence Length = 204570 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 tcatcttcctccccaaacacatcac 266 |||||||| |||||||||||||||| Sbjct: 171216 tcatcttcttccccaaacacatcac 171240
>gb|AY358892.1| Homo sapiens clone DNA35916 DLL1 (UNQ146) mRNA, complete cds Length = 2933 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 2706 taaattttggtaaatatgtac 2726
>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence Length = 211296 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gacaatatgccgtgtcttttc 227 ||||||||||||||||||||| Sbjct: 7862 gacaatatgccgtgtcttttc 7882
>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence Length = 319367 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gacaatatgccgtgtcttttc 227 ||||||||||||||||||||| Sbjct: 98778 gacaatatgccgtgtcttttc 98798
>ref|XM_790661.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591081 (LOC591081), mRNA Length = 1680 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 629 ccatgcctgaactatgactgcttgc 653 |||||| |||||||||||||||||| Sbjct: 1662 ccatgcttgaactatgactgcttgc 1638
>emb|AL078605.30|HSJ894D12 Human DNA sequence from clone RP5-894D12 on chromosome 6q26-27 Contains the 5' end of the gene for KIAA1838, the DLL1 gene for delta-like 1 (mouse) homolog, the 3' end of a novel gene and 5 CpG islands, complete sequence Length = 119563 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 109849 taaattttggtaaatatgtac 109869
>emb|Y16031.1|HIVY16031 HIV-1 vif, vpr, tat, vpu genes, strain BCF12 Length = 1333 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 cagcggttcgtcgtcgcttct 569 ||||||||||||||||||||| Sbjct: 1013 cagcggttcgtcgtcgcttct 993
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 tctccttcatcttctcgacaa 211 ||||||||||||||||||||| Sbjct: 174886 tctccttcatcttctcgacaa 174866
>emb|CR936694.1| Homo sapiens mRNA; cDNA DKFZp781E1651 (from clone DKFZp781E1651) Length = 6746 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 aggatataaattttggtaaat 135 ||||||||||||||||||||| Sbjct: 2447 aggatataaattttggtaaat 2467
>gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160943 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ttttcagaagcatcttcctcg 414 ||||||||||||||||||||| Sbjct: 153173 ttttcagaagcatcttcctcg 153193
>dbj|AK056127.1| Homo sapiens cDNA FLJ31565 fis, clone NT2RI2001474 Length = 1859 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ttttcagaagcatcttcctcg 414 ||||||||||||||||||||| Sbjct: 121 ttttcagaagcatcttcctcg 141
>ref|NM_005618.2| Homo sapiens delta-like 1 (Drosophila) (DLL1), mRNA Length = 3158 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 2987 taaattttggtaaatatgtac 3007
>gb|AC009094.7|AC009094 Homo sapiens chromosome 16 clone RP11-430C1, complete sequence Length = 198781 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aggatataaattttggtaaat 135 ||||||||||||||||||||| Sbjct: 141492 aggatataaattttggtaaat 141472
>gb|AC022311.5| Homo sapiens BAC clone RP11-146M24 from 2, complete sequence Length = 154084 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 attttggtaaatatgtacttc 144 ||||||||||||||||||||| Sbjct: 24213 attttggtaaatatgtacttc 24193
>gb|AF222310.1|AF222310 Homo sapiens Delta1 (DLL1) gene, complete cds Length = 11445 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 11276 taaattttggtaaatatgtac 11296
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 tcagcagcggcgccatcaact 448 ||||||||||||||||||||| Sbjct: 1830701 tcagcagcggcgccatcaact 1830721
>gb|AF003522.1|AF003522 Homo sapiens Delta mRNA, complete cds Length = 3162 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 2991 taaattttggtaaatatgtac 3011
>gb|AC009069.3|AC009069 Homo sapiens chromosome 16 clone RP11-314L21, complete sequence Length = 174873 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 aggatataaattttggtaaat 135 ||||||||||||||||||||| Sbjct: 157793 aggatataaattttggtaaat 157813
>gb|BC057400.1| Mus musculus delta-like 1 (Drosophila), mRNA (cDNA clone MGC:62324 IMAGE:6402691), complete cds Length = 3023 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 2770 taaattttggtaaatatgtac 2790
>gb|AC154378.2| Mus musculus BAC clone RP23-64O5 from 17, complete sequence Length = 232701 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 taaattttggtaaatatgtac 141 ||||||||||||||||||||| Sbjct: 47479 taaattttggtaaatatgtac 47459
>gb|AC153960.3| Mus musculus 10 BAC RP24-210O10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162022 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gacaatatgccgtgtcttttc 227 ||||||||||||||||||||| Sbjct: 150273 gacaatatgccgtgtcttttc 150293
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 tcagcagcggcgccatcaact 448 ||||||||||||||||||||| Sbjct: 1904155 tcagcagcggcgccatcaact 1904175
>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10, complete sequence Length = 243665 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 ctgcattttcagaagcatctt 409 ||||||||||||||||||||| Sbjct: 186926 ctgcattttcagaagcatctt 186946
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 tcagcagcggcgccatcaact 448 ||||||||||||||||||||| Sbjct: 23658 tcagcagcggcgccatcaact 23638
>ref|NM_105688.2| Arabidopsis thaliana nucleic acid binding AT1G70200 mRNA, complete cds Length = 1883 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 agaactctccttcatcttct 205 |||||||||||||||||||| Sbjct: 383 agaactctccttcatcttct 364
>gb|AY804570.1| Drosophila yakuba isolate 1250_3 Est6 gene, partial sequence Length = 688 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804569.1| Drosophila yakuba isolate 1250_2 Est6 gene, partial sequence Length = 688 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804568.1| Drosophila yakuba isolate 1250_1 Est6 gene, partial sequence Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804567.1| Drosophila santomea isolate 1250_4 Est6 gene, partial sequence Length = 690 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804559.1| Drosophila yakuba isolate SaoT_4 Est6 gene, partial sequence Length = 688 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804558.1| Drosophila yakuba isolate SaoT_3 Est6 gene, partial sequence Length = 688 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804557.1| Drosophila yakuba isolate SaoT_2 Est6 gene, partial sequence Length = 688 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY804556.1| Drosophila yakuba isolate SaoT_1 Est6 gene, partial sequence Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 373 aaggatataaattttggtaa 392
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 aagttcaccttctgaaggta 475 |||||||||||||||||||| Sbjct: 22535 aagttcaccttctgaaggta 22516
>ref|NM_010777.3| Mus musculus myelin basic protein (Mbp), transcript variant 7, mRNA Length = 2531 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 448 catctgcctccccaaacacatcac 425
>ref|NM_001025245.1| Mus musculus myelin basic protein (Mbp), transcript variant 8, mRNA Length = 4820 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 448 catctgcctccccaaacacatcac 425
>ref|NM_001025289.1| Rattus norvegicus myelin basic protein (Mbp), transcript variant 6, mRNA Length = 1495 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 389 catctgcctccccaaacacatcac 366
>gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, complete sequence Length = 178664 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 tgcttctgttcttggttctt 517 |||||||||||||||||||| Sbjct: 96527 tgcttctgttcttggttctt 96546
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tctccttcatcttctcgaca 210 |||||||||||||||||||| Sbjct: 217089 tctccttcatcttctcgaca 217070
>emb|X67319.1|MMHMBPRG M.musculus mRNA for transcript overlapping myelin basic protein gene Length = 4670 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 320 catctgcctccccaaacacatcac 297
>emb|CR729248.2|CNS0GPMU Tetraodon nigroviridis full-length cDNA Length = 1558 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 gtaccaccactcctaactgaagag 376 ||||||||||||| |||||||||| Sbjct: 840 gtaccaccactccaaactgaagag 863
>emb|CR724720.2|CNS0GM52 Tetraodon nigroviridis full-length cDNA Length = 1569 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 gtaccaccactcctaactgaagag 376 ||||||||||||| |||||||||| Sbjct: 835 gtaccaccactccaaactgaagag 858
>emb|CR722304.2|CNS0GK9Y Tetraodon nigroviridis full-length cDNA Length = 1043 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 gtaccaccactcctaactgaagag 376 ||||||||||||| |||||||||| Sbjct: 795 gtaccaccactccaaactgaagag 818
>emb|CR638885.2|CNS0ERXN Tetraodon nigroviridis full-length cDNA Length = 1066 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 gtaccaccactcctaactgaagag 376 ||||||||||||| |||||||||| Sbjct: 818 gtaccaccactccaaactgaagag 841
>emb|AL451061.8| Human DNA sequence from clone RP11-291C6 on chromosome 6 Contains an alpha-methylacyl-CoA racemase (AMACR) pseudogene and a CpG island, complete sequence Length = 91503 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 atcttcctccccaaacacat 263 |||||||||||||||||||| Sbjct: 13769 atcttcctccccaaacacat 13750
>emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chromosome 6 Contains a novel gene (HSPC125, my013, FLJ22592) and two CpG islands, complete sequence Length = 114521 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 tggttgatgcttctgttctt 510 |||||||||||||||||||| Sbjct: 42902 tggttgatgcttctgttctt 42921
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgta 140 |||||||||||||||||||| Sbjct: 28837 taaattttggtaaatatgta 28856
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ccggcagaggaataagcaag 116 |||||||||||||||||||| Sbjct: 85341 ccggcagaggaataagcaag 85360
>emb|CR936874.1| Homo sapiens mRNA; cDNA DKFZp686J1430 (from clone DKFZp686J1430) Length = 4960 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agagaagagcccactgctgc 392 |||||||||||||||||||| Sbjct: 4251 agagaagagcccactgctgc 4232
>emb|AJ279007.1|DYA279007 Drosophila yakuba Est6 gene for B-carboxyl esterase and partial Est7 gene for esterase Length = 3774 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aaggatataaattttggtaa 133 |||||||||||||||||||| Sbjct: 2397 aaggatataaattttggtaa 2416
>emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-acetylserine (thiol) lyase A1, exons 1-11 Length = 5340 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ccggcagaggaataagcaag 116 |||||||||||||||||||| Sbjct: 1925 ccggcagaggaataagcaag 1906
>emb|CR936789.1| Homo sapiens mRNA; cDNA DKFZp781G2056 (from clone DKFZp781G2056) Length = 6741 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgta 140 |||||||||||||||||||| Sbjct: 3671 taaattttggtaaatatgta 3690
>emb|AL669857.7| Mouse DNA sequence from clone RP23-291B8 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel pseudogene, the 5' end of the Sgcd gene for sarcoglycan delta (dystrophin-associated glycoprotein) and two CpG islands, complete sequence Length = 201309 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aaatatgtacttctaactaa 151 |||||||||||||||||||| Sbjct: 18902 aaatatgtacttctaactaa 18883
>gb|AC092984.3| Homo sapiens 3 BAC RP11-113N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116831 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 agagcccactgctgcatttt 397 |||||||||||||||||||| Sbjct: 83763 agagcccactgctgcatttt 83744
>gb|BC084713.1| Rattus norvegicus myelin basic protein, transcript variant 6, mRNA (cDNA clone MGC:105460 IMAGE:7303731), complete cds Length = 1495 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 389 catctgcctccccaaacacatcac 366
>gb|BC051094.1| Mus musculus myelin basic protein, transcript variant 8, mRNA (cDNA clone MGC:58924 IMAGE:3982852), complete cds Length = 1368 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 379 catctgcctccccaaacacatcac 356
>emb|BX942837.5| Zebrafish DNA sequence from clone CH211-224B23 in linkage group 5, complete sequence Length = 183605 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 cccactgctgcattttcaga 401 |||||||||||||||||||| Sbjct: 52823 cccactgctgcattttcaga 52804
>gb|DQ093965.1| Homo sapiens serine/threonine kinase 25 (STE20 homolog, yeast) (STK25) gene, complete cds Length = 16019 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agagaagagcccactgctgc 392 |||||||||||||||||||| Sbjct: 14705 agagaagagcccactgctgc 14686
>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence Length = 165022 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tgatgcttctgttcttggtt 514 |||||||||||||||||||| Sbjct: 15997 tgatgcttctgttcttggtt 16016
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccactgctgcattttcagaa 402 |||||||||||||||||||| Sbjct: 73815 ccactgctgcattttcagaa 73796
>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence Length = 154064 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 aagagcccactgctgcattt 396 |||||||||||||||||||| Sbjct: 106491 aagagcccactgctgcattt 106510
>dbj|AK040716.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530019K13 product:myelin basic protein, full insert sequence Length = 4720 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 347 catctgcctccccaaacacatcac 324
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cggccgccgatgcccagcag 352 |||||||||||||||||||| Sbjct: 4306100 cggccgccgatgcccagcag 4306081
>dbj|AK039047.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230090C03 product:myelin basic protein, full insert sequence Length = 4745 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 389 catctgcctccccaaacacatcac 366
>gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, region 59D-59E, BAC clone BACR25I01, complete sequence Length = 218565 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gaataagcaaggatataaat 125 |||||||||||||||||||| Sbjct: 70817 gaataagcaaggatataaat 70836
>gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR22N13, complete sequence Length = 177376 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 tgccgctcatcttcctcccc 255 |||||||||||||||||||| Sbjct: 75144 tgccgctcatcttcctcccc 75125
>gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, complete sequence Length = 173381 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 catcttcctccccaaacaca 262 |||||||||||||||||||| Sbjct: 161267 catcttcctccccaaacaca 161248
>gb|AC110299.3| Homo sapiens BAC clone RP11-491D2 from 2, complete sequence Length = 81704 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agagaagagcccactgctgc 392 |||||||||||||||||||| Sbjct: 66536 agagaagagcccactgctgc 66517
>gb|BT005155.1| Arabidopsis thaliana clone U20367 unknown protein (At1g70200) mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 agaactctccttcatcttct 205 |||||||||||||||||||| Sbjct: 334 agaactctccttcatcttct 315
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tcttcagcggttcgtcgtcg 564 |||||||||||||||||||| Sbjct: 6117850 tcttcagcggttcgtcgtcg 6117869
>gb|BT003858.1| Arabidopsis thaliana clone RAFL14-86-J02 (R20367) unknown protein (At1g70200) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 agaactctccttcatcttct 205 |||||||||||||||||||| Sbjct: 383 agaactctccttcatcttct 364
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgccgatgcccagcaggtac 356 |||||||||||||||||||| Sbjct: 3308282 cgccgatgcccagcaggtac 3308301
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ctccttcatcttctcgacaa 211 |||||||||||||||||||| Sbjct: 1529578 ctccttcatcttctcgacaa 1529597
>gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92 of 118 of the complete sequence Length = 214365 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 tgccgctcatcttcctcccc 255 |||||||||||||||||||| Sbjct: 54768 tgccgctcatcttcctcccc 54749
>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete sequence Length = 299331 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gaataagcaaggatataaat 125 |||||||||||||||||||| Sbjct: 258934 gaataagcaaggatataaat 258953
>emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-862P13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187564 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atataaattttggtaaatat 137 |||||||||||||||||||| Sbjct: 152751 atataaattttggtaaatat 152732
>dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-334E6, complete sequences Length = 191362 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 487 gagctggttgatgcttctgttcttggtt 514 |||||||||| | ||||||||||||||| Sbjct: 169750 gagctggttggttcttctgttcttggtt 169777
>gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, complete sequence Length = 188960 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 tgcttctgttcttggttctt 517 |||||||||||||||||||| Sbjct: 186440 tgcttctgttcttggttctt 186459
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ccggcagaggaataagcaag 116 |||||||||||||||||||| Sbjct: 30795 ccggcagaggaataagcaag 30814
>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete sequence Length = 114505 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 agaactctccttcatcttct 205 |||||||||||||||||||| Sbjct: 28670 agaactctccttcatcttct 28651
>gb|L07508.1|MUSGOLLIB Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone BG21) Length = 1407 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 425 catctgcctccccaaacacatcac 402
>gb|L07507.1|MUSGOLLIA Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone J37.) Length = 2490 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 catcttcctccccaaacacatcac 266 ||||| |||||||||||||||||| Sbjct: 408 catctgcctccccaaacacatcac 385
>dbj|AB038490.1| Homo sapiens gene for fukutin, complete cds Length = 131892 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 taaattttggtaaatatgta 140 |||||||||||||||||||| Sbjct: 25407 taaattttggtaaatatgta 25426 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,629,343 Number of Sequences: 3902068 Number of extensions: 6629343 Number of successful extensions: 137765 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137411 Number of HSP's gapped (non-prelim): 354 length of query: 668 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 645 effective length of database: 17,143,297,704 effective search space: 11057427019080 effective search space used: 11057427019080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)