ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, compl... 46 0.15
2gb|BC065063.1| Mus musculus delta-like 1 (Drosophila), mRNA (cDN... 42 2.3
3ref|NM_007865.2| Mus musculus delta-like 1 (Drosophila) (Dll1), ... 42 2.3
4emb|X80903.1|MMDELTA1 M.musculus mRNA for Delta-like 1 protein 42 2.3
5ref|XM_448312.1| Candida glabrata CBS138, CAGL0K01991g partial mRNA 42 2.3
6gb|AF196571.1| Homo sapiens Delta-like-1 protein (DLL1) mRNA, co... 42 2.3
7gb|AC125078.2| Mus musculus BAC clone RP23-478C7 from chromosome... 42 2.3
8gb|AY358892.1| Homo sapiens clone DNA35916 DLL1 (UNQ146) mRNA, c... 42 2.3
9gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, co... 42 2.3
10gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, co... 42 2.3
11ref|XM_790661.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 42 2.3
12emb|AL078605.30|HSJ894D12 Human DNA sequence from clone RP5-894D... 42 2.3
13emb|Y16031.1|HIVY16031 HIV-1 vif, vpr, tat, vpu genes, strain BCF12 42 2.3
14emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 42 2.3
15emb|CR936694.1| Homo sapiens mRNA; cDNA DKFZp781E1651 (from clon... 42 2.3
16gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Can... 42 2.3
17dbj|AK056127.1| Homo sapiens cDNA FLJ31565 fis, clone NT2RI2001474 42 2.3
18ref|NM_005618.2| Homo sapiens delta-like 1 (Drosophila) (DLL1), ... 42 2.3
19gb|AC009094.7|AC009094 Homo sapiens chromosome 16 clone RP11-430... 42 2.3
20gb|AC022311.5| Homo sapiens BAC clone RP11-146M24 from 2, comple... 42 2.3
21gb|AF222310.1|AF222310 Homo sapiens Delta1 (DLL1) gene, complete... 42 2.3
22gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 42 2.3
23gb|AF003522.1|AF003522 Homo sapiens Delta mRNA, complete cds 42 2.3
24gb|AC009069.3|AC009069 Homo sapiens chromosome 16 clone RP11-314... 42 2.3
25gb|BC057400.1| Mus musculus delta-like 1 (Drosophila), mRNA (cDN... 42 2.3
26gb|AC154378.2| Mus musculus BAC clone RP23-64O5 from 17, complet... 42 2.3
27gb|AC153960.3| Mus musculus 10 BAC RP24-210O10 (Roswell Park Can... 42 2.3
28gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 42 2.3
29emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in ... 42 2.3
30emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella ty... 42 2.3
31ref|NM_105688.2| Arabidopsis thaliana nucleic acid binding AT1G7... 40 9.1
32gb|AY804570.1| Drosophila yakuba isolate 1250_3 Est6 gene, parti... 40 9.1
33gb|AY804569.1| Drosophila yakuba isolate 1250_2 Est6 gene, parti... 40 9.1
34gb|AY804568.1| Drosophila yakuba isolate 1250_1 Est6 gene, parti... 40 9.1
35gb|AY804567.1| Drosophila santomea isolate 1250_4 Est6 gene, par... 40 9.1
36gb|AY804559.1| Drosophila yakuba isolate SaoT_4 Est6 gene, parti... 40 9.1
37gb|AY804558.1| Drosophila yakuba isolate SaoT_3 Est6 gene, parti... 40 9.1
38gb|AY804557.1| Drosophila yakuba isolate SaoT_2 Est6 gene, parti... 40 9.1
39gb|AY804556.1| Drosophila yakuba isolate SaoT_1 Est6 gene, parti... 40 9.1
40gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ... 40 9.1
41ref|NM_010777.3| Mus musculus myelin basic protein (Mbp), transc... 40 9.1
42ref|NM_001025245.1| Mus musculus myelin basic protein (Mbp), tra... 40 9.1
43ref|NM_001025289.1| Rattus norvegicus myelin basic protein (Mbp)... 40 9.1
44gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, com... 40 9.1
45emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete ch... 40 9.1
46emb|X67319.1|MMHMBPRG M.musculus mRNA for transcript overlapping... 40 9.1
47emb|CR729248.2|CNS0GPMU Tetraodon nigroviridis full-length cDNA 40 9.1
48emb|CR724720.2|CNS0GM52 Tetraodon nigroviridis full-length cDNA 40 9.1
49emb|CR722304.2|CNS0GK9Y Tetraodon nigroviridis full-length cDNA 40 9.1
50emb|CR638885.2|CNS0ERXN Tetraodon nigroviridis full-length cDNA 40 9.1
51emb|AL451061.8| Human DNA sequence from clone RP11-291C6 on chro... 40 9.1
52emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chr... 40 9.1
53emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on ch... 40 9.1
54emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 9.1
55emb|CR936874.1| Homo sapiens mRNA; cDNA DKFZp686J1430 (from clon... 40 9.1
56emb|AJ279007.1|DYA279007 Drosophila yakuba Est6 gene for B-carbo... 40 9.1
57emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-a... 40 9.1
58emb|CR936789.1| Homo sapiens mRNA; cDNA DKFZp781G2056 (from clon... 40 9.1
59emb|AL669857.7| Mouse DNA sequence from clone RP23-291B8 on chro... 40 9.1
60gb|AC092984.3| Homo sapiens 3 BAC RP11-113N11 (Roswell Park Canc... 40 9.1
61gb|BC084713.1| Rattus norvegicus myelin basic protein, transcrip... 40 9.1
62gb|BC051094.1| Mus musculus myelin basic protein, transcript var... 40 9.1
63emb|BX942837.5| Zebrafish DNA sequence from clone CH211-224B23 i... 40 9.1
64gb|DQ093965.1| Homo sapiens serine/threonine kinase 25 (STE20 ho... 40 9.1
65gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, comp... 40 9.1
66gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, co... 40 9.1
67gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, com... 40 9.1
68dbj|AK040716.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 9.1
69gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 9.1
70dbj|AK039047.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 9.1
71gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, r... 40 9.1
72gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, r... 40 9.1
73gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, compl... 40 9.1
74gb|AC110299.3| Homo sapiens BAC clone RP11-491D2 from 2, complet... 40 9.1
75gb|BT005155.1| Arabidopsis thaliana clone U20367 unknown protein... 40 9.1
76dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.1
77gb|BT003858.1| Arabidopsis thaliana clone RAFL14-86-J02 (R20367)... 40 9.1
78emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.1
79emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 9.1
80gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92... 40 9.1
81gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68... 40 9.1
82emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-8... 40 9.1
83dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.1
84gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, co... 40 9.1
85emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 40 9.1
86gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thali... 40 9.1
87gb|L07508.1|MUSGOLLIB Mouse Golli-mpb mRNA, complete cds (altern... 40 9.1
88gb|L07507.1|MUSGOLLIA Mouse Golli-mpb mRNA, complete cds (altern... 40 9.1
89dbj|AB038490.1| Homo sapiens gene for fukutin, complete cds 40 9.1

>gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, complete sequence
          Length = 188944

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 280   ctgcctttcctcttcaggtcata 302
             |||||||||||||||||||||||
Sbjct: 56477 ctgcctttcctcttcaggtcata 56499



to top

>gb|BC065063.1| Mus musculus delta-like 1 (Drosophila), mRNA (cDNA clone MGC:64654
            IMAGE:6416191), complete cds
          Length = 3209

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 3022 taaattttggtaaatatgtac 3042



to top

>ref|NM_007865.2| Mus musculus delta-like 1 (Drosophila) (Dll1), mRNA
          Length = 3209

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 3022 taaattttggtaaatatgtac 3042



to top

>emb|X80903.1|MMDELTA1 M.musculus mRNA for Delta-like 1 protein
          Length = 2857

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 2687 taaattttggtaaatatgtac 2707



to top

>ref|XM_448312.1| Candida glabrata CBS138, CAGL0K01991g partial mRNA
          Length = 2019

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 191  tctccttcatcttctcgacaa 211
            |||||||||||||||||||||
Sbjct: 1747 tctccttcatcttctcgacaa 1727



to top

>gb|AF196571.1| Homo sapiens Delta-like-1 protein (DLL1) mRNA, complete cds
          Length = 3122

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 2987 taaattttggtaaatatgtac 3007



to top

>gb|AC125078.2| Mus musculus BAC clone RP23-478C7 from chromosome 6, complete sequence
          Length = 204570

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 242    tcatcttcctccccaaacacatcac 266
              |||||||| ||||||||||||||||
Sbjct: 171216 tcatcttcttccccaaacacatcac 171240



to top

>gb|AY358892.1| Homo sapiens clone DNA35916 DLL1 (UNQ146) mRNA, complete cds
          Length = 2933

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 2706 taaattttggtaaatatgtac 2726



to top

>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence
          Length = 211296

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 207  gacaatatgccgtgtcttttc 227
            |||||||||||||||||||||
Sbjct: 7862 gacaatatgccgtgtcttttc 7882



to top

>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence
          Length = 319367

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   gacaatatgccgtgtcttttc 227
             |||||||||||||||||||||
Sbjct: 98778 gacaatatgccgtgtcttttc 98798



to top

>ref|XM_790661.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC591081 (LOC591081), mRNA
          Length = 1680

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 629  ccatgcctgaactatgactgcttgc 653
            |||||| ||||||||||||||||||
Sbjct: 1662 ccatgcttgaactatgactgcttgc 1638



to top

>emb|AL078605.30|HSJ894D12 Human DNA sequence from clone RP5-894D12 on chromosome 6q26-27 Contains
              the 5' end of the gene for KIAA1838, the DLL1 gene for
              delta-like 1 (mouse) homolog, the 3' end of a novel gene
              and 5 CpG islands, complete sequence
          Length = 119563

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    taaattttggtaaatatgtac 141
              |||||||||||||||||||||
Sbjct: 109849 taaattttggtaaatatgtac 109869



to top

>emb|Y16031.1|HIVY16031 HIV-1 vif, vpr, tat, vpu genes, strain BCF12
          Length = 1333

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  cagcggttcgtcgtcgcttct 569
            |||||||||||||||||||||
Sbjct: 1013 cagcggttcgtcgtcgcttct 993



to top

>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 191    tctccttcatcttctcgacaa 211
              |||||||||||||||||||||
Sbjct: 174886 tctccttcatcttctcgacaa 174866



to top

>emb|CR936694.1| Homo sapiens mRNA; cDNA DKFZp781E1651 (from clone DKFZp781E1651)
          Length = 6746

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  aggatataaattttggtaaat 135
            |||||||||||||||||||||
Sbjct: 2447 aggatataaattttggtaaat 2467



to top

>gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160943

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 394    ttttcagaagcatcttcctcg 414
              |||||||||||||||||||||
Sbjct: 153173 ttttcagaagcatcttcctcg 153193



to top

>dbj|AK056127.1| Homo sapiens cDNA FLJ31565 fis, clone NT2RI2001474
          Length = 1859

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 394 ttttcagaagcatcttcctcg 414
           |||||||||||||||||||||
Sbjct: 121 ttttcagaagcatcttcctcg 141



to top

>ref|NM_005618.2| Homo sapiens delta-like 1 (Drosophila) (DLL1), mRNA
          Length = 3158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 2987 taaattttggtaaatatgtac 3007



to top

>gb|AC009094.7|AC009094 Homo sapiens chromosome 16 clone RP11-430C1, complete sequence
          Length = 198781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 115    aggatataaattttggtaaat 135
              |||||||||||||||||||||
Sbjct: 141492 aggatataaattttggtaaat 141472



to top

>gb|AC022311.5| Homo sapiens BAC clone RP11-146M24 from 2, complete sequence
          Length = 154084

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   attttggtaaatatgtacttc 144
             |||||||||||||||||||||
Sbjct: 24213 attttggtaaatatgtacttc 24193



to top

>gb|AF222310.1|AF222310 Homo sapiens Delta1 (DLL1) gene, complete cds
          Length = 11445

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   taaattttggtaaatatgtac 141
             |||||||||||||||||||||
Sbjct: 11276 taaattttggtaaatatgtac 11296



to top

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 428     tcagcagcggcgccatcaact 448
               |||||||||||||||||||||
Sbjct: 1830701 tcagcagcggcgccatcaact 1830721



to top

>gb|AF003522.1|AF003522 Homo sapiens Delta mRNA, complete cds
          Length = 3162

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 2991 taaattttggtaaatatgtac 3011



to top

>gb|AC009069.3|AC009069 Homo sapiens chromosome 16 clone RP11-314L21, complete sequence
          Length = 174873

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    aggatataaattttggtaaat 135
              |||||||||||||||||||||
Sbjct: 157793 aggatataaattttggtaaat 157813



to top

>gb|BC057400.1| Mus musculus delta-like 1 (Drosophila), mRNA (cDNA clone MGC:62324
            IMAGE:6402691), complete cds
          Length = 3023

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  taaattttggtaaatatgtac 141
            |||||||||||||||||||||
Sbjct: 2770 taaattttggtaaatatgtac 2790



to top

>gb|AC154378.2| Mus musculus BAC clone RP23-64O5 from 17, complete sequence
          Length = 232701

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   taaattttggtaaatatgtac 141
             |||||||||||||||||||||
Sbjct: 47479 taaattttggtaaatatgtac 47459



to top

>gb|AC153960.3| Mus musculus 10 BAC RP24-210O10 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162022

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    gacaatatgccgtgtcttttc 227
              |||||||||||||||||||||
Sbjct: 150273 gacaatatgccgtgtcttttc 150293



to top

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 428     tcagcagcggcgccatcaact 448
               |||||||||||||||||||||
Sbjct: 1904155 tcagcagcggcgccatcaact 1904175



to top

>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10, complete
              sequence
          Length = 243665

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 389    ctgcattttcagaagcatctt 409
              |||||||||||||||||||||
Sbjct: 186926 ctgcattttcagaagcatctt 186946



to top

>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 5/20
          Length = 254050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   tcagcagcggcgccatcaact 448
             |||||||||||||||||||||
Sbjct: 23658 tcagcagcggcgccatcaact 23638



to top

>ref|NM_105688.2| Arabidopsis thaliana nucleic acid binding AT1G70200 mRNA, complete
           cds
          Length = 1883

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 agaactctccttcatcttct 205
           ||||||||||||||||||||
Sbjct: 383 agaactctccttcatcttct 364



to top

>gb|AY804570.1| Drosophila yakuba isolate 1250_3 Est6 gene, partial sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804569.1| Drosophila yakuba isolate 1250_2 Est6 gene, partial sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804568.1| Drosophila yakuba isolate 1250_1 Est6 gene, partial sequence
          Length = 687

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804567.1| Drosophila santomea isolate 1250_4 Est6 gene, partial sequence
          Length = 690

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804559.1| Drosophila yakuba isolate SaoT_4 Est6 gene, partial sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804558.1| Drosophila yakuba isolate SaoT_3 Est6 gene, partial sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804557.1| Drosophila yakuba isolate SaoT_2 Est6 gene, partial sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY804556.1| Drosophila yakuba isolate SaoT_1 Est6 gene, partial sequence
          Length = 687

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 aaggatataaattttggtaa 133
           ||||||||||||||||||||
Sbjct: 373 aaggatataaattttggtaa 392



to top

>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   aagttcaccttctgaaggta 475
             ||||||||||||||||||||
Sbjct: 22535 aagttcaccttctgaaggta 22516



to top

>ref|NM_010777.3| Mus musculus myelin basic protein (Mbp), transcript variant 7, mRNA
          Length = 2531

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 448 catctgcctccccaaacacatcac 425



to top

>ref|NM_001025245.1| Mus musculus myelin basic protein (Mbp), transcript variant 8, mRNA
          Length = 4820

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 448 catctgcctccccaaacacatcac 425



to top

>ref|NM_001025289.1| Rattus norvegicus myelin basic protein (Mbp), transcript variant 6,
           mRNA
          Length = 1495

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 389 catctgcctccccaaacacatcac 366



to top

>gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, complete sequence
          Length = 178664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   tgcttctgttcttggttctt 517
             ||||||||||||||||||||
Sbjct: 96527 tgcttctgttcttggttctt 96546



to top

>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12
          Length = 300000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    tctccttcatcttctcgaca 210
              ||||||||||||||||||||
Sbjct: 217089 tctccttcatcttctcgaca 217070



to top

>emb|X67319.1|MMHMBPRG M.musculus mRNA for transcript overlapping myelin basic protein
           gene
          Length = 4670

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 320 catctgcctccccaaacacatcac 297



to top

>emb|CR729248.2|CNS0GPMU Tetraodon nigroviridis full-length cDNA
          Length = 1558

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 gtaccaccactcctaactgaagag 376
           ||||||||||||| ||||||||||
Sbjct: 840 gtaccaccactccaaactgaagag 863



to top

>emb|CR724720.2|CNS0GM52 Tetraodon nigroviridis full-length cDNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 gtaccaccactcctaactgaagag 376
           ||||||||||||| ||||||||||
Sbjct: 835 gtaccaccactccaaactgaagag 858



to top

>emb|CR722304.2|CNS0GK9Y Tetraodon nigroviridis full-length cDNA
          Length = 1043

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 gtaccaccactcctaactgaagag 376
           ||||||||||||| ||||||||||
Sbjct: 795 gtaccaccactccaaactgaagag 818



to top

>emb|CR638885.2|CNS0ERXN Tetraodon nigroviridis full-length cDNA
          Length = 1066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 gtaccaccactcctaactgaagag 376
           ||||||||||||| ||||||||||
Sbjct: 818 gtaccaccactccaaactgaagag 841



to top

>emb|AL451061.8| Human DNA sequence from clone RP11-291C6 on chromosome 6 Contains an
             alpha-methylacyl-CoA racemase (AMACR) pseudogene and a CpG
             island, complete sequence
          Length = 91503

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   atcttcctccccaaacacat 263
             ||||||||||||||||||||
Sbjct: 13769 atcttcctccccaaacacat 13750



to top

>emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chromosome 6 Contains a
             novel gene (HSPC125, my013, FLJ22592) and two CpG islands,
             complete sequence
          Length = 114521

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   tggttgatgcttctgttctt 510
             ||||||||||||||||||||
Sbjct: 42902 tggttgatgcttctgttctt 42921



to top

>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3
             Contains part of a pseudogene similar to KIAA1272,
             KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2
             proteins, the 3' end of the CSDUFD1 gene for cystatin and
             DUF19 domain containing 1, a novel gene, the FCMD gene for
             Fukuyama type congenital muscular dystrophy protein, the
             TAL2 gene for T-cell acute lymphocytic leukemia 2 protein
             and two CpG islands, complete sequence
          Length = 167005

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   taaattttggtaaatatgta 140
             ||||||||||||||||||||
Sbjct: 28837 taaattttggtaaatatgta 28856



to top

>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ccggcagaggaataagcaag 116
             ||||||||||||||||||||
Sbjct: 85341 ccggcagaggaataagcaag 85360



to top

>emb|CR936874.1| Homo sapiens mRNA; cDNA DKFZp686J1430 (from clone DKFZp686J1430)
          Length = 4960

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 373  agagaagagcccactgctgc 392
            ||||||||||||||||||||
Sbjct: 4251 agagaagagcccactgctgc 4232



to top

>emb|AJ279007.1|DYA279007 Drosophila yakuba Est6 gene for B-carboxyl esterase and partial Est7
            gene for esterase
          Length = 3774

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  aaggatataaattttggtaa 133
            ||||||||||||||||||||
Sbjct: 2397 aaggatataaattttggtaa 2416



to top

>emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-acetylserine (thiol) lyase A1,
            exons 1-11
          Length = 5340

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   ccggcagaggaataagcaag 116
            ||||||||||||||||||||
Sbjct: 1925 ccggcagaggaataagcaag 1906



to top

>emb|CR936789.1| Homo sapiens mRNA; cDNA DKFZp781G2056 (from clone DKFZp781G2056)
          Length = 6741

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  taaattttggtaaatatgta 140
            ||||||||||||||||||||
Sbjct: 3671 taaattttggtaaatatgta 3690



to top

>emb|AL669857.7| Mouse DNA sequence from clone RP23-291B8 on chromosome 11 Contains a
             ribosomal protein S2 (Rps2) pseudogene, a novel
             pseudogene, the 5' end of the Sgcd gene for sarcoglycan
             delta (dystrophin-associated glycoprotein) and two CpG
             islands, complete sequence
          Length = 201309

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aaatatgtacttctaactaa 151
             ||||||||||||||||||||
Sbjct: 18902 aaatatgtacttctaactaa 18883



to top

>gb|AC092984.3| Homo sapiens 3 BAC RP11-113N11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116831

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   agagcccactgctgcatttt 397
             ||||||||||||||||||||
Sbjct: 83763 agagcccactgctgcatttt 83744



to top

>gb|BC084713.1| Rattus norvegicus myelin basic protein, transcript variant 6, mRNA
           (cDNA clone MGC:105460 IMAGE:7303731), complete cds
          Length = 1495

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 389 catctgcctccccaaacacatcac 366



to top

>gb|BC051094.1| Mus musculus myelin basic protein, transcript variant 8, mRNA (cDNA
           clone MGC:58924 IMAGE:3982852), complete cds
          Length = 1368

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 379 catctgcctccccaaacacatcac 356



to top

>emb|BX942837.5| Zebrafish DNA sequence from clone CH211-224B23 in linkage group 5,
             complete sequence
          Length = 183605

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   cccactgctgcattttcaga 401
             ||||||||||||||||||||
Sbjct: 52823 cccactgctgcattttcaga 52804



to top

>gb|DQ093965.1| Homo sapiens serine/threonine kinase 25 (STE20 homolog, yeast) (STK25)
             gene, complete cds
          Length = 16019

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   agagaagagcccactgctgc 392
             ||||||||||||||||||||
Sbjct: 14705 agagaagagcccactgctgc 14686



to top

>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence
          Length = 165022

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   tgatgcttctgttcttggtt 514
             ||||||||||||||||||||
Sbjct: 15997 tgatgcttctgttcttggtt 16016



to top

>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence
          Length = 189722

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ccactgctgcattttcagaa 402
             ||||||||||||||||||||
Sbjct: 73815 ccactgctgcattttcagaa 73796



to top

>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence
          Length = 154064

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    aagagcccactgctgcattt 396
              ||||||||||||||||||||
Sbjct: 106491 aagagcccactgctgcattt 106510



to top

>dbj|AK040716.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530019K13 product:myelin basic
           protein, full insert sequence
          Length = 4720

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 347 catctgcctccccaaacacatcac 324



to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 333     cggccgccgatgcccagcag 352
               ||||||||||||||||||||
Sbjct: 4306100 cggccgccgatgcccagcag 4306081



to top

>dbj|AK039047.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230090C03 product:myelin basic
           protein, full insert sequence
          Length = 4745

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 389 catctgcctccccaaacacatcac 366



to top

>gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, region 59D-59E, BAC clone
             BACR25I01, complete sequence
          Length = 218565

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gaataagcaaggatataaat 125
             ||||||||||||||||||||
Sbjct: 70817 gaataagcaaggatataaat 70836



to top

>gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone
             BACR22N13, complete sequence
          Length = 177376

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   tgccgctcatcttcctcccc 255
             ||||||||||||||||||||
Sbjct: 75144 tgccgctcatcttcctcccc 75125



to top

>gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, complete sequence
          Length = 173381

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    catcttcctccccaaacaca 262
              ||||||||||||||||||||
Sbjct: 161267 catcttcctccccaaacaca 161248



to top

>gb|AC110299.3| Homo sapiens BAC clone RP11-491D2 from 2, complete sequence
          Length = 81704

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   agagaagagcccactgctgc 392
             ||||||||||||||||||||
Sbjct: 66536 agagaagagcccactgctgc 66517



to top

>gb|BT005155.1| Arabidopsis thaliana clone U20367 unknown protein (At1g70200) mRNA,
           complete cds
          Length = 1648

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 agaactctccttcatcttct 205
           ||||||||||||||||||||
Sbjct: 334 agaactctccttcatcttct 315



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 545     tcttcagcggttcgtcgtcg 564
               ||||||||||||||||||||
Sbjct: 6117850 tcttcagcggttcgtcgtcg 6117869



to top

>gb|BT003858.1| Arabidopsis thaliana clone RAFL14-86-J02 (R20367) unknown protein
           (At1g70200) mRNA, complete cds
          Length = 1827

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 agaactctccttcatcttct 205
           ||||||||||||||||||||
Sbjct: 383 agaactctccttcatcttct 364



to top

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 337     cgccgatgcccagcaggtac 356
               ||||||||||||||||||||
Sbjct: 3308282 cgccgatgcccagcaggtac 3308301



to top

>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 192     ctccttcatcttctcgacaa 211
               ||||||||||||||||||||
Sbjct: 1529578 ctccttcatcttctcgacaa 1529597



to top

>gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92 of 118 of the
             complete sequence
          Length = 214365

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   tgccgctcatcttcctcccc 255
             ||||||||||||||||||||
Sbjct: 54768 tgccgctcatcttcctcccc 54749



to top

>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete
              sequence
          Length = 299331

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    gaataagcaaggatataaat 125
              ||||||||||||||||||||
Sbjct: 258934 gaataagcaaggatataaat 258953



to top

>emb|AL049835.3|CNS0000E Human chromosome 14 DNA sequence BAC R-862P13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187564

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    atataaattttggtaaatat 137
              ||||||||||||||||||||
Sbjct: 152751 atataaattttggtaaatat 152732



to top

>dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-334E6, complete
              sequences
          Length = 191362

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 487    gagctggttgatgcttctgttcttggtt 514
              |||||||||| | |||||||||||||||
Sbjct: 169750 gagctggttggttcttctgttcttggtt 169777



to top

>gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, complete sequence
          Length = 188960

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    tgcttctgttcttggttctt 517
              ||||||||||||||||||||
Sbjct: 186440 tgcttctgttcttggttctt 186459



to top

>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ccggcagaggaataagcaag 116
             ||||||||||||||||||||
Sbjct: 30795 ccggcagaggaataagcaag 30814



to top

>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 114505

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   agaactctccttcatcttct 205
             ||||||||||||||||||||
Sbjct: 28670 agaactctccttcatcttct 28651



to top

>gb|L07508.1|MUSGOLLIB Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone
           BG21)
          Length = 1407

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 425 catctgcctccccaaacacatcac 402



to top

>gb|L07507.1|MUSGOLLIA Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone
           J37.)
          Length = 2490

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 catcttcctccccaaacacatcac 266
           ||||| ||||||||||||||||||
Sbjct: 408 catctgcctccccaaacacatcac 385



to top

>dbj|AB038490.1| Homo sapiens gene for fukutin, complete cds
          Length = 131892

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   taaattttggtaaatatgta 140
             ||||||||||||||||||||
Sbjct: 25407 taaattttggtaaatatgta 25426


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,629,343
Number of Sequences: 3902068
Number of extensions: 6629343
Number of successful extensions: 137765
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137411
Number of HSP's gapped (non-prelim): 354
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top