>gb|AC146577.2| Pan troglodytes BAC clone CH251-189A13 from Y, complete sequence
          Length = 171643

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 248    gctagctgcaggcatgcatggct 270
              |||||||||||||||||||||||
Sbjct: 163803 gctagctgcaggcatgcatggct 163825

>gb|AC145770.1| Pan troglodytes BAC clone CH251-576K13 from Y, complete sequence
          Length = 177726

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 248    gctagctgcaggcatgcatggct 270
              |||||||||||||||||||||||
Sbjct: 137305 gctagctgcaggcatgcatggct 137283

>dbj|BS000576.2| Pan troglodytes chromosome Y clone:PTB-045N05, complete sequences
          Length = 190089

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 248    gctagctgcaggcatgcatggct 270
              |||||||||||||||||||||||
Sbjct: 142390 gctagctgcaggcatgcatggct 142368

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 248      gctagctgcaggcatgcatggct 270
                |||||||||||||||||||||||
Sbjct: 23375887 gctagctgcaggcatgcatggct 23375909

>gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, complete sequence
          Length = 217813

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 156    cttcctgccccctcttttttc 176
              |||||||||||||||||||||
Sbjct: 154715 cttcctgccccctcttttttc 154695

>gb|AC108011.4| Homo sapiens BAC clone RP13-511O19 from 4, complete sequence
          Length = 81894

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   tctgtatgatttgtgcattga 226
             |||||||||||||||||||||
Sbjct: 63732 tctgtatgatttgtgcattga 63712

>gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosome 8, complete sequence
          Length = 235813

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    cttcctgccccctctttttt 175
              ||||||||||||||||||||
Sbjct: 206297 cttcctgccccctctttttt 206316

>emb|CT010431.7| Mouse DNA sequence from clone RP23-453M21 on chromosome 13, complete
              sequence
          Length = 204148

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    tcctgccccctcttttttcc 177
              ||||||||||||||||||||
Sbjct: 162877 tcctgccccctcttttttcc 162896

>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178905

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cttcctgccccctctttttt 175
             ||||||||||||||||||||
Sbjct: 62479 cttcctgccccctctttttt 62460

>gb|AC121910.3| Mus musculus BAC clone RP24-180H14 from chromosome 13, complete
             sequence
          Length = 143473

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tcctgccccctcttttttcc 177
             ||||||||||||||||||||
Sbjct: 19612 tcctgccccctcttttttcc 19631

>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2
             of 11 of the complete sequence
          Length = 613322

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   agctgcaggcatgcatggct 270
             ||||||||||||||||||||
Sbjct: 93284 agctgcaggcatgcatggct 93265

>emb|AL445188.5| Human DNA sequence from clone RP11-260E14 on chromosome 13, complete
              sequence
          Length = 164061

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    agctgcaggcatgcatggct 270
              ||||||||||||||||||||
Sbjct: 153364 agctgcaggcatgcatggct 153345

>gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome 8, complete sequence
          Length = 220673

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cttcctgccccctctttttt 175
             ||||||||||||||||||||
Sbjct: 70908 cttcctgccccctctttttt 70927

>gb|AC026348.23| Homo sapiens 3 BAC RP11-553D4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104159

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   agctgcaggcatgcatggct 270
             ||||||||||||||||||||
Sbjct: 82106 agctgcaggcatgcatggct 82125

>gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 170093

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ctgtatgatttgtgcattga 226
              ||||||||||||||||||||
Sbjct: 100003 ctgtatgatttgtgcattga 99984

>gb|AC153966.4| Mus musculus 10 BAC RP24-357P6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 155839

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ctgtatgatttgtgcattga 226
             ||||||||||||||||||||
Sbjct: 25887 ctgtatgatttgtgcattga 25868


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,650,528
Number of Sequences: 3902068
Number of extensions: 2650528
Number of successful extensions: 39752
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39721
Number of HSP's gapped (non-prelim): 31
length of query: 330
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 308
effective length of database: 17,147,199,772
effective search space: 5281337529776
effective search space used: 5281337529776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)